RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 CABLES1Q8TDN4 633 aa18.55■□□□□ 0.56
HDAC1-207ENST00000481281 USP21Q9UK80 565 aa18.55■□□□□ 0.56
HDAC1-207ENST00000481281 RXRBP28702 533 aa18.54■□□□□ 0.56
HDAC1-207ENST00000481281 ATRNO75882 1429 aa18.54■□□□□ 0.56
HDAC1-207ENST00000481281 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
HDAC1-207ENST00000481281 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
HDAC1-207ENST00000481281 QTRT2Q9H974 415 aaKnown RBP18.53■□□□□ 0.56
HDAC1-207ENST00000481281 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
HDAC1-207ENST00000481281 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
HDAC1-207ENST00000481281 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
HDAC1-207ENST00000481281 HAP1P54257 671 aaPredicted RBP18.51■□□□□ 0.55
HDAC1-207ENST00000481281 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
HDAC1-207ENST00000481281 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
HDAC1-207ENST00000481281 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
HDAC1-207ENST00000481281 USP6P35125 1406 aa18.5■□□□□ 0.55
HDAC1-207ENST00000481281 CABP1Q9NZU7 370 aa18.5■□□□□ 0.55
HDAC1-207ENST00000481281 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
HDAC1-207ENST00000481281 RGS12O14924 1447 aa18.49■□□□□ 0.55
HDAC1-207ENST00000481281 COL14A1Q05707 1796 aaKnown RBP18.49■□□□□ 0.55
HDAC1-207ENST00000481281 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
HDAC1-207ENST00000481281 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
HDAC1-207ENST00000481281 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
HDAC1-207ENST00000481281 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
HDAC1-207ENST00000481281 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
HDAC1-207ENST00000481281 GLI3P10071 1580 aa18.46■□□□□ 0.55
HDAC1-207ENST00000481281 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
HDAC1-207ENST00000481281 PIK3C2AO00443 1686 aa18.45■□□□□ 0.54
HDAC1-207ENST00000481281 TESK2Q96S53 571 aa18.45■□□□□ 0.54
HDAC1-207ENST00000481281 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
HDAC1-207ENST00000481281 USP19O94966 1318 aa18.45■□□□□ 0.54
HDAC1-207ENST00000481281 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
HDAC1-207ENST00000481281 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
HDAC1-207ENST00000481281 USP47Q96K76 1375 aa18.43■□□□□ 0.54
HDAC1-207ENST00000481281 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
HDAC1-207ENST00000481281 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
HDAC1-207ENST00000481281 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
HDAC1-207ENST00000481281 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
HDAC1-207ENST00000481281 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
HDAC1-207ENST00000481281 PUS7Q96PZ0 661 aaKnown RBP18.42■□□□□ 0.54
HDAC1-207ENST00000481281 SLIT3O75094 1523 aa18.41■□□□□ 0.54
HDAC1-207ENST00000481281 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
HDAC1-207ENST00000481281 KIAA0232Q92628 1395 aa18.41■□□□□ 0.54
HDAC1-207ENST00000481281 VPS72Q15906 364 aa18.4■□□□□ 0.54
HDAC1-207ENST00000481281 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
HDAC1-207ENST00000481281 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
HDAC1-207ENST00000481281 SLC24A1O60721 1099 aa18.39■□□□□ 0.53
HDAC1-207ENST00000481281 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.53
HDAC1-207ENST00000481281 CPDO75976 1380 aa18.39■□□□□ 0.53
HDAC1-207ENST00000481281 USP54Q70EL1 1684 aa18.38■□□□□ 0.53
HDAC1-207ENST00000481281 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
HDAC1-207ENST00000481281 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
HDAC1-207ENST00000481281 KTN1Q86UP2 1357 aaKnown RBP18.38■□□□□ 0.53
HDAC1-207ENST00000481281 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
HDAC1-207ENST00000481281 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
HDAC1-207ENST00000481281 GCP02774 474 aa18.35■□□□□ 0.53
HDAC1-207ENST00000481281 NLRP6P59044 892 aa18.35■□□□□ 0.53
HDAC1-207ENST00000481281 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
HDAC1-207ENST00000481281 CHRNA2Q15822 529 aa18.34■□□□□ 0.53
HDAC1-207ENST00000481281 SLC12A5Q9H2X9 1139 aa18.34■□□□□ 0.53
HDAC1-207ENST00000481281 BRWD3Q6RI45 1802 aa18.34■□□□□ 0.53
HDAC1-207ENST00000481281 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
HDAC1-207ENST00000481281 A0A1W2PP64 1363 aa18.33■□□□□ 0.53
HDAC1-207ENST00000481281 TMC1Q8TDI8 760 aa18.33■□□□□ 0.52
HDAC1-207ENST00000481281 UPF1Q92900 1129 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDAC1-207ENST00000481281 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
HDAC1-207ENST00000481281 ONECUT3O60422 494 aaPredicted RBP18.32■□□□□ 0.52
HDAC1-207ENST00000481281 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 TMF1P82094 1093 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 HDGFL2Q7Z4V5 671 aaPredicted RBP18.31■□□□□ 0.52
HDAC1-207ENST00000481281 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
HDAC1-207ENST00000481281 NFAT5O94916 1531 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 COL18A1P39060 1754 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
HDAC1-207ENST00000481281 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
HDAC1-207ENST00000481281 MYOM1P52179 1685 aa18.29■□□□□ 0.52
HDAC1-207ENST00000481281 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
HDAC1-207ENST00000481281 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
HDAC1-207ENST00000481281 SEPT12Q8IYM1 358 aa18.28■□□□□ 0.52
HDAC1-207ENST00000481281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.27■□□□□ 0.52
HDAC1-207ENST00000481281 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.52
HDAC1-207ENST00000481281 ABCC6O95255 1503 aa18.27■□□□□ 0.51
HDAC1-207ENST00000481281 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.51
HDAC1-207ENST00000481281 SPATA31A1Q5TZJ5 1347 aa18.26■□□□□ 0.51
HDAC1-207ENST00000481281 OVOS2A0A0J9YW53 1432 aa18.26■□□□□ 0.51
HDAC1-207ENST00000481281 OVOS2Q6IE36 1432 aa18.26■□□□□ 0.51
HDAC1-207ENST00000481281 CDCA8Q53HL2 280 aa18.26■□□□□ 0.51
HDAC1-207ENST00000481281 NME9Q86XW9 330 aa18.26■□□□□ 0.51
HDAC1-207ENST00000481281 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
HDAC1-207ENST00000481281 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
HDAC1-207ENST00000481281 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
HDAC1-207ENST00000481281 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
HDAC1-207ENST00000481281 LTN1O94822 1766 aa18.24■□□□□ 0.51
HDAC1-207ENST00000481281 RGPD5Q99666 1765 aa18.24■□□□□ 0.51
HDAC1-207ENST00000481281 EVA1CP58658 441 aa18.22■□□□□ 0.51
HDAC1-207ENST00000481281 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
HDAC1-207ENST00000481281 EP400Q96L91 3159 aa18.22■□□□□ 0.51
HDAC1-207ENST00000481281 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.512e-8■■■■■ 38.7
HDAC1-207ENST00000481281 CRB1P82279 1406 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms