RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 FAM83GA6ND36 823 aa16.22■□□□□ 0.19
RAPGEF1-207ENST00000481260 RXRBP28702 533 aa16.22■□□□□ 0.19
RAPGEF1-207ENST00000481260 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
RAPGEF1-207ENST00000481260 RGS12O14924 1447 aa16.21■□□□□ 0.19
RAPGEF1-207ENST00000481260 ATRNO75882 1429 aa16.21■□□□□ 0.19
RAPGEF1-207ENST00000481260 SLIT2O94813 1529 aa16.21■□□□□ 0.19
RAPGEF1-207ENST00000481260 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
RAPGEF1-207ENST00000481260 TESK2Q96S53 571 aa16.21■□□□□ 0.19
RAPGEF1-207ENST00000481260 CRYBG1Q9Y4K1 1723 aa16.21■□□□□ 0.19
RAPGEF1-207ENST00000481260 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-207ENST00000481260 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
RAPGEF1-207ENST00000481260 USP6P35125 1406 aa16.18■□□□□ 0.18
RAPGEF1-207ENST00000481260 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
RAPGEF1-207ENST00000481260 SBNO2Q9Y2G9 1366 aa16.17■□□□□ 0.18
RAPGEF1-207ENST00000481260 CHRNA2Q15822 529 aa16.17■□□□□ 0.18
RAPGEF1-207ENST00000481260 UNC5CLQ8IV45 518 aa16.17■□□□□ 0.18
RAPGEF1-207ENST00000481260 TRPC5Q9UL62 973 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF1-207ENST00000481260 USP47Q96K76 1375 aa16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 PLCH1Q4KWH8 1693 aa16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 EP400Q96L91 3159 aa16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
RAPGEF1-207ENST00000481260 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
RAPGEF1-207ENST00000481260 GLI3P10071 1580 aa16.15■□□□□ 0.18
RAPGEF1-207ENST00000481260 ZC3H6P61129 1189 aaKnown RBP16.15■□□□□ 0.18
RAPGEF1-207ENST00000481260 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
RAPGEF1-207ENST00000481260 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
RAPGEF1-207ENST00000481260 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
RAPGEF1-207ENST00000481260 USP19O94966 1318 aa16.14■□□□□ 0.17
RAPGEF1-207ENST00000481260 NRKQ7Z2Y5 1582 aa16.13■□□□□ 0.17
RAPGEF1-207ENST00000481260 CPSF1Q10570 1443 aaKnown RBP16.13■□□□□ 0.17
RAPGEF1-207ENST00000481260 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF1-207ENST00000481260 CDK12Q9NYV4 1490 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF1-207ENST00000481260 PIK3C2AO00443 1686 aa16.13■□□□□ 0.17
RAPGEF1-207ENST00000481260 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
RAPGEF1-207ENST00000481260 NRAPQ86VF7 1730 aa16.12■□□□□ 0.17
RAPGEF1-207ENST00000481260 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
RAPGEF1-207ENST00000481260 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
RAPGEF1-207ENST00000481260 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.11■□□□□ 0.17
RAPGEF1-207ENST00000481260 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
RAPGEF1-207ENST00000481260 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
RAPGEF1-207ENST00000481260 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
RAPGEF1-207ENST00000481260 COL14A1Q05707 1796 aaKnown RBP16.09■□□□□ 0.17
RAPGEF1-207ENST00000481260 NLRP6P59044 892 aa16.09■□□□□ 0.17
RAPGEF1-207ENST00000481260 VPS72Q15906 364 aa16.09■□□□□ 0.17
RAPGEF1-207ENST00000481260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.09■□□□□ 0.17
RAPGEF1-207ENST00000481260 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.17
RAPGEF1-207ENST00000481260 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
RAPGEF1-207ENST00000481260 ZBTB7CA1YPR0 619 aa16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 SOX12O15370 315 aa16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 GCP02774 474 aa16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 NME9Q86XW9 330 aa16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 A0A1W2PP64 1363 aa16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.16
RAPGEF1-207ENST00000481260 SLIT3O75094 1523 aa16.07■□□□□ 0.16
RAPGEF1-207ENST00000481260 CAMTA1Q9Y6Y1 1673 aa16.07■□□□□ 0.16
RAPGEF1-207ENST00000481260 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
RAPGEF1-207ENST00000481260 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
RAPGEF1-207ENST00000481260 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
RAPGEF1-207ENST00000481260 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF1-207ENST00000481260 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF1-207ENST00000481260 CPDO75976 1380 aa16.04■□□□□ 0.16
RAPGEF1-207ENST00000481260 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
RAPGEF1-207ENST00000481260 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
RAPGEF1-207ENST00000481260 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
RAPGEF1-207ENST00000481260 SPATA31A5Q5VU36 1347 aa16.03■□□□□ 0.16
RAPGEF1-207ENST00000481260 SPATA31A7Q8IWB4 1347 aa16.03■□□□□ 0.16
RAPGEF1-207ENST00000481260 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-207ENST00000481260 AXIN2Q9Y2T1 843 aa16.03■□□□□ 0.16
RAPGEF1-207ENST00000481260 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.16
RAPGEF1-207ENST00000481260 NFAT5O94916 1531 aa16.02■□□□□ 0.15
RAPGEF1-207ENST00000481260 BRWD3Q6RI45 1802 aa16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 FBLN1P23142 703 aa16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 TMF1P82094 1093 aa16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 FAM182BQ5T319 152 aa16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 PUS7Q96PZ0 661 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
RAPGEF1-207ENST00000481260 SPATA31A1Q5TZJ5 1347 aa16■□□□□ 0.15
RAPGEF1-207ENST00000481260 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
RAPGEF1-207ENST00000481260 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
RAPGEF1-207ENST00000481260 COL18A1P39060 1754 aa16■□□□□ 0.15
RAPGEF1-207ENST00000481260 COL5A2P05997 1499 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF1-207ENST00000481260 ARHGEF25Q86VW2 580 aa15.99■□□□□ 0.15
RAPGEF1-207ENST00000481260 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
RAPGEF1-207ENST00000481260 C11orf95C9JLR9 678 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF1-207ENST00000481260 TERF2IPQ9NYB0 399 aa15.98■□□□□ 0.15
RAPGEF1-207ENST00000481260 A0A0G2JS52 829 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 EVA1CP58658 441 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 MYT1Q01538 1121 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 CARD14Q9BXL6 1004 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 MYOM1P52179 1685 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 ANKRD36BQ8N2N9 1353 aa15.97■□□□□ 0.15
RAPGEF1-207ENST00000481260 THSD7AQ9UPZ6 1657 aa15.96■□□□□ 0.15
RAPGEF1-207ENST00000481260 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms