RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 RGPD8O14715 1765 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-210ENST00000481231 IFT172Q9UG01 1749 aa14.21□□□□□ -0.14
SMARCE1-210ENST00000481231 ABCC11Q96J66 1382 aa14.21□□□□□ -0.14
SMARCE1-210ENST00000481231 C1QTNF8P60827 252 aa14.2□□□□□ -0.14
SMARCE1-210ENST00000481231 PMFBP1Q8TBY8 1022 aa14.2□□□□□ -0.14
SMARCE1-210ENST00000481231 KNDC1Q76NI1 1749 aa14.2□□□□□ -0.14
SMARCE1-210ENST00000481231 SPATA31A1Q5TZJ5 1347 aa14.18□□□□□ -0.14
SMARCE1-210ENST00000481231 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
SMARCE1-210ENST00000481231 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-210ENST00000481231 PRDM11Q9NQV5 511 aa14.17□□□□□ -0.14
SMARCE1-210ENST00000481231 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-210ENST00000481231 YTHDC2Q9H6S0 1430 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-210ENST00000481231 SAFB2Q14151 953 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMARCE1-210ENST00000481231 STRN4Q9NRL3 753 aa14.16□□□□□ -0.14
SMARCE1-210ENST00000481231 USP35Q9P2H5 1018 aa14.16□□□□□ -0.14
SMARCE1-210ENST00000481231 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
SMARCE1-210ENST00000481231 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
SMARCE1-210ENST00000481231 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-210ENST00000481231 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-210ENST00000481231 MYOM1P52179 1685 aa14.14□□□□□ -0.15
SMARCE1-210ENST00000481231 CRYBG1Q9Y4K1 1723 aa14.13□□□□□ -0.15
SMARCE1-210ENST00000481231 PDE3BQ13370 1112 aa14.13□□□□□ -0.15
SMARCE1-210ENST00000481231 PIK3C2GO75747 1445 aa14.13□□□□□ -0.15
SMARCE1-210ENST00000481231 KIAA0232Q92628 1395 aa14.12□□□□□ -0.15
SMARCE1-210ENST00000481231 ZBTB7AO95365 584 aa14.12□□□□□ -0.15
SMARCE1-210ENST00000481231 RGL3Q3MIN7 710 aa14.12□□□□□ -0.15
SMARCE1-210ENST00000481231 CEP350Q5VT06 3117 aa14.12□□□□□ -0.15
SMARCE1-210ENST00000481231 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
SMARCE1-210ENST00000481231 GPRASP1Q5JY77 1395 aa14.1□□□□□ -0.15
SMARCE1-210ENST00000481231 ANKARQ7Z5J8 1434 aa14.1□□□□□ -0.15
SMARCE1-210ENST00000481231 PTGER2P43116 358 aa14.1□□□□□ -0.15
SMARCE1-210ENST00000481231 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
SMARCE1-210ENST00000481231 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-210ENST00000481231 SPATA31E1Q6ZUB1 1445 aa14.09□□□□□ -0.15
SMARCE1-210ENST00000481231 FHDC1Q9C0D6 1143 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-210ENST00000481231 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-210ENST00000481231 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
SMARCE1-210ENST00000481231 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-210ENST00000481231 ANKRD30BQ9BXX2 1392 aa14.08□□□□□ -0.16
SMARCE1-210ENST00000481231 SSH2Q76I76 1423 aa14.07□□□□□ -0.16
SMARCE1-210ENST00000481231 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-210ENST00000481231 SIRT1Q96EB6 747 aa14.07□□□□□ -0.16
SMARCE1-210ENST00000481231 SYT17Q9BSW7 474 aa14.07□□□□□ -0.16
SMARCE1-210ENST00000481231 HIRIP3Q9BW71 556 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-210ENST00000481231 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
SMARCE1-210ENST00000481231 LARP1Q6PKG0 1096 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-210ENST00000481231 PHRF1Q9P1Y6 1649 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-210ENST00000481231 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-210ENST00000481231 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
SMARCE1-210ENST00000481231 EVA1CP58658 441 aa14.04□□□□□ -0.16
SMARCE1-210ENST00000481231 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
SMARCE1-210ENST00000481231 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
SMARCE1-210ENST00000481231 TCP11L2Q8N4U5 519 aa14.04□□□□□ -0.16
SMARCE1-210ENST00000481231 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-210ENST00000481231 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
SMARCE1-210ENST00000481231 NGDNQ8NEJ9 315 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-210ENST00000481231 POGKQ9P215 609 aa14.03□□□□□ -0.16
SMARCE1-210ENST00000481231 RGPD3A6NKT7 1758 aaPredicted RBP14.02□□□□□ -0.16
SMARCE1-210ENST00000481231 RGPD4Q7Z3J3 1758 aa14.02□□□□□ -0.16
SMARCE1-210ENST00000481231 OVOS2A0A0G2JMS6 1433 aa14.02□□□□□ -0.16
SMARCE1-210ENST00000481231 OVOS2A0A0J9YW53 1432 aa14.02□□□□□ -0.16
SMARCE1-210ENST00000481231 OVOS2Q6IE36 1432 aa14.02□□□□□ -0.16
SMARCE1-210ENST00000481231 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-210ENST00000481231 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-210ENST00000481231 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
SMARCE1-210ENST00000481231 DLC1Q96QB1 1528 aa14.01□□□□□ -0.17
SMARCE1-210ENST00000481231 TULP4Q9NRJ4 1543 aa14.01□□□□□ -0.17
SMARCE1-210ENST00000481231 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-210ENST00000481231 PLSCR1O15162 318 aa14.01□□□□□ -0.17
SMARCE1-210ENST00000481231 CHD4Q14839 1912 aa14□□□□□ -0.17
SMARCE1-210ENST00000481231 PROM2Q8N271 834 aa14□□□□□ -0.17
SMARCE1-210ENST00000481231 PARP4Q9UKK3 1724 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-210ENST00000481231 SGIP1Q9BQI5 828 aa13.99□□□□□ -0.17
SMARCE1-210ENST00000481231 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
SMARCE1-210ENST00000481231 EIF3AQ14152 1382 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-210ENST00000481231 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
SMARCE1-210ENST00000481231 STK32BQ9NY57 414 aa13.97□□□□□ -0.17
SMARCE1-210ENST00000481231 LRRC37A3O60309 1634 aa13.97□□□□□ -0.17
SMARCE1-210ENST00000481231 ATP7BP35670 1465 aa13.96□□□□□ -0.17
SMARCE1-210ENST00000481231 GPR162Q16538 588 aa13.96□□□□□ -0.17
SMARCE1-210ENST00000481231 TRAK1Q9UPV9 953 aa13.96□□□□□ -0.17
SMARCE1-210ENST00000481231 THRAP3Q9Y2W1 955 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-210ENST00000481231 GOLGB1Q14789 3259 aaKnown RBP13.96□□□□□ -0.18
SMARCE1-210ENST00000481231 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
SMARCE1-210ENST00000481231 COL5A2P05997 1499 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-210ENST00000481231 C11orf95C9JLR9 678 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-210ENST00000481231 WASLO00401 505 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-210ENST00000481231 SLC15A2Q16348 729 aa13.95□□□□□ -0.18
SMARCE1-210ENST00000481231 ARXQ96QS3 562 aa13.95□□□□□ -0.18
SMARCE1-210ENST00000481231 SBF2Q86WG5 1849 aa13.94□□□□□ -0.18
SMARCE1-210ENST00000481231 ADGRB1O14514 1584 aa13.93□□□□□ -0.18
SMARCE1-210ENST00000481231 TXNRD1Q16881 649 aa13.93□□□□□ -0.18
SMARCE1-210ENST00000481231 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-210ENST00000481231 CPDO75976 1380 aa13.93□□□□□ -0.18
SMARCE1-210ENST00000481231 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
SMARCE1-210ENST00000481231 CRB1P82279 1406 aa13.92□□□□□ -0.18
SMARCE1-210ENST00000481231 DDB1Q16531 1140 aa13.92□□□□□ -0.18
SMARCE1-210ENST00000481231 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
SMARCE1-210ENST00000481231 MARCH10Q8NA82 808 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-210ENST00000481231 USP19O94966 1318 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms