RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
ABCF3-215ENST00000481116 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.34■□□□□ 0.53
ABCF3-215ENST00000481116 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
ABCF3-215ENST00000481116 RBM6P78332 1123 aaKnown RBP18.32■□□□□ 0.52
ABCF3-215ENST00000481116 NUTM2GQ5VZR2 741 aa18.32■□□□□ 0.52
ABCF3-215ENST00000481116 ATRNO75882 1429 aa18.32■□□□□ 0.52
ABCF3-215ENST00000481116 PHRF1Q9P1Y6 1649 aaKnown RBP18.31■□□□□ 0.52
ABCF3-215ENST00000481116 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
ABCF3-215ENST00000481116 TRPC5Q9UL62 973 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-215ENST00000481116 SLIT2O94813 1529 aa18.31■□□□□ 0.52
ABCF3-215ENST00000481116 RGS12O14924 1447 aa18.31■□□□□ 0.52
ABCF3-215ENST00000481116 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
ABCF3-215ENST00000481116 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
ABCF3-215ENST00000481116 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
ABCF3-215ENST00000481116 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
ABCF3-215ENST00000481116 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
ABCF3-215ENST00000481116 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
ABCF3-215ENST00000481116 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.51
ABCF3-215ENST00000481116 GLI3P10071 1580 aa18.26■□□□□ 0.51
ABCF3-215ENST00000481116 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
ABCF3-215ENST00000481116 BRWD3Q6RI45 1802 aa18.24■□□□□ 0.51
ABCF3-215ENST00000481116 GJD4Q96KN9 370 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-215ENST00000481116 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
ABCF3-215ENST00000481116 USP6P35125 1406 aa18.23■□□□□ 0.51
ABCF3-215ENST00000481116 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
ABCF3-215ENST00000481116 NRKQ7Z2Y5 1582 aa18.22■□□□□ 0.51
ABCF3-215ENST00000481116 ST20-MTHFSA0A0A6YYL1 179 aa18.22■□□□□ 0.51
ABCF3-215ENST00000481116 BTG4Q9NY30 223 aa18.22■□□□□ 0.51
ABCF3-215ENST00000481116 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
ABCF3-215ENST00000481116 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
ABCF3-215ENST00000481116 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
ABCF3-215ENST00000481116 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
ABCF3-215ENST00000481116 CCER1Q8TC90 406 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-215ENST00000481116 ATAD2Q6PL18 1390 aa18.2■□□□□ 0.5
ABCF3-215ENST00000481116 KIAA0232Q92628 1395 aa18.2■□□□□ 0.5
ABCF3-215ENST00000481116 UPF1Q92900 1129 aaKnown RBP eCLIP18.2■□□□□ 0.5
ABCF3-215ENST00000481116 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
ABCF3-215ENST00000481116 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
ABCF3-215ENST00000481116 VPS72Q15906 364 aa18.19■□□□□ 0.5
ABCF3-215ENST00000481116 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
ABCF3-215ENST00000481116 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
ABCF3-215ENST00000481116 TESK2Q96S53 571 aa18.18■□□□□ 0.5
ABCF3-215ENST00000481116 USP19O94966 1318 aa18.18■□□□□ 0.5
ABCF3-215ENST00000481116 BRD4O60885 1362 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-215ENST00000481116 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
ABCF3-215ENST00000481116 NLRP6P59044 892 aa18.17■□□□□ 0.5
ABCF3-215ENST00000481116 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
ABCF3-215ENST00000481116 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
ABCF3-215ENST00000481116 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
ABCF3-215ENST00000481116 ZNF692Q9BU19 519 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-215ENST00000481116 SLC12A5Q9H2X9 1139 aa18.16■□□□□ 0.5
ABCF3-215ENST00000481116 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
ABCF3-215ENST00000481116 TTC21BQ7Z4L5 1316 aa18.16■□□□□ 0.5
ABCF3-215ENST00000481116 USP47Q96K76 1375 aa18.16■□□□□ 0.5
ABCF3-215ENST00000481116 GCP02774 474 aa18.15■□□□□ 0.5
ABCF3-215ENST00000481116 RGPD5Q99666 1765 aa18.14■□□□□ 0.5
ABCF3-215ENST00000481116 LMO7Q8WWI1 1683 aa18.14■□□□□ 0.49
ABCF3-215ENST00000481116 SLIT3O75094 1523 aa18.13■□□□□ 0.49
ABCF3-215ENST00000481116 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
ABCF3-215ENST00000481116 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
ABCF3-215ENST00000481116 CAMTA1Q9Y6Y1 1673 aa18.12■□□□□ 0.49
ABCF3-215ENST00000481116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
ABCF3-215ENST00000481116 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
ABCF3-215ENST00000481116 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
ABCF3-215ENST00000481116 FAM98CQ17RN3 349 aaKnown RBP18.11■□□□□ 0.49
ABCF3-215ENST00000481116 COL18A1P39060 1754 aa18.11■□□□□ 0.49
ABCF3-215ENST00000481116 CPDO75976 1380 aa18.1■□□□□ 0.49
ABCF3-215ENST00000481116 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
ABCF3-215ENST00000481116 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
ABCF3-215ENST00000481116 TTC21AQ8NDW8 1320 aa18.1■□□□□ 0.49
ABCF3-215ENST00000481116 SOX12O15370 315 aa18.1■□□□□ 0.49
ABCF3-215ENST00000481116 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
ABCF3-215ENST00000481116 A0A0G2JS52 829 aa18.09■□□□□ 0.49
ABCF3-215ENST00000481116 ONECUT3O60422 494 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-215ENST00000481116 MYT1Q01538 1121 aa18.09■□□□□ 0.49
ABCF3-215ENST00000481116 HDGFL2Q7Z4V5 671 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-215ENST00000481116 EVA1CP58658 441 aa18.08■□□□□ 0.48
ABCF3-215ENST00000481116 NME9Q86XW9 330 aa18.08■□□□□ 0.48
ABCF3-215ENST00000481116 PUS7Q96PZ0 661 aaKnown RBP18.08■□□□□ 0.48
ABCF3-215ENST00000481116 EP400Q96L91 3159 aa18.07■□□□□ 0.48
ABCF3-215ENST00000481116 USP54Q70EL1 1684 aa18.07■□□□□ 0.48
ABCF3-215ENST00000481116 TMF1P82094 1093 aa18.07■□□□□ 0.48
ABCF3-215ENST00000481116 LTN1O94822 1766 aa18.07■□□□□ 0.48
ABCF3-215ENST00000481116 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
ABCF3-215ENST00000481116 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
ABCF3-215ENST00000481116 TERF2IPQ9NYB0 399 aa18.06■□□□□ 0.48
ABCF3-215ENST00000481116 USP35Q9P2H5 1018 aa18.06■□□□□ 0.48
ABCF3-215ENST00000481116 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
ABCF3-215ENST00000481116 NFAT5O94916 1531 aa18.05■□□□□ 0.48
ABCF3-215ENST00000481116 EDC4Q6P2E9 1401 aaKnown RBP18.05■□□□□ 0.48
ABCF3-215ENST00000481116 MYOM1P52179 1685 aa18.04■□□□□ 0.48
ABCF3-215ENST00000481116 COL5A2P05997 1499 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-215ENST00000481116 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
ABCF3-215ENST00000481116 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
ABCF3-215ENST00000481116 AXIN2Q9Y2T1 843 aa18.03■□□□□ 0.48
ABCF3-215ENST00000481116 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
ABCF3-215ENST00000481116 USP31Q70CQ4 1352 aa18.03■□□□□ 0.48
ABCF3-215ENST00000481116 FAM182BQ5T319 152 aa18.02■□□□□ 0.48
ABCF3-215ENST00000481116 ARHGEF25Q86VW2 580 aa18.02■□□□□ 0.48
ABCF3-215ENST00000481116 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms