RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
CBX3-206ENST00000481057 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
CBX3-206ENST00000481057 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■■□□ 18.3
CBX3-206ENST00000481057 AP1G2O75843 785 aa12.53□□□□□ -0.4
CBX3-206ENST00000481057 JUNDP17535 347 aa12.53□□□□□ -0.4
CBX3-206ENST00000481057 TSC1Q92574 1164 aa12.53□□□□□ -0.4
CBX3-206ENST00000481057 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
CBX3-206ENST00000481057 SLC6A16Q9GZN6 736 aa12.52□□□□□ -0.41
CBX3-206ENST00000481057 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
CBX3-206ENST00000481057 MMP16P51512 607 aa12.51□□□□□ -0.41
CBX3-206ENST00000481057 USP17L8P0C7I0 530 aa12.5□□□□□ -0.41
CBX3-206ENST00000481057 CTDSPL2Q05D32 466 aa12.5□□□□□ -0.41
CBX3-206ENST00000481057 S1PR4O95977 384 aa12.49□□□□□ -0.41
CBX3-206ENST00000481057 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
CBX3-206ENST00000481057 MCM6Q14566 821 aa12.48□□□□□ -0.41
CBX3-206ENST00000481057 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
CBX3-206ENST00000481057 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
CBX3-206ENST00000481057 LYPD8Q6UX82 237 aa12.47□□□□□ -0.41
CBX3-206ENST00000481057 PLSCR2Q9NRY7 297 aa12.47□□□□□ -0.41
CBX3-206ENST00000481057 FLIIQ13045 1269 aa12.46□□□□□ -0.41
CBX3-206ENST00000481057 PTPRNQ16849 979 aa12.46□□□□□ -0.41
CBX3-206ENST00000481057 SNRKQ9NRH2 765 aa12.46□□□□□ -0.41
CBX3-206ENST00000481057 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
CBX3-206ENST00000481057 ABCC10Q5T3U5 1492 aa12.45□□□□□ -0.42
CBX3-206ENST00000481057 MTMR14Q8NCE2 650 aa12.44□□□□□ -0.42
CBX3-206ENST00000481057 LRRN4Q8WUT4 740 aa12.44□□□□□ -0.42
CBX3-206ENST00000481057 CFTRP13569 1480 aa12.43□□□□□ -0.42
CBX3-206ENST00000481057 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
CBX3-206ENST00000481057 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
CBX3-206ENST00000481057 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
CBX3-206ENST00000481057 F12P00748 615 aaPredicted RBP12.41□□□□□ -0.42
CBX3-206ENST00000481057 CCNYL3P0C7X3 344 aa12.41□□□□□ -0.42
CBX3-206ENST00000481057 GGCXP38435 758 aa12.41□□□□□ -0.42
CBX3-206ENST00000481057 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
CBX3-206ENST00000481057 FCF1Q9Y324 198 aaKnown RBP12.4□□□□□ -0.42
CBX3-206ENST00000481057 RNF223E7ERA6 249 aa12.39□□□□□ -0.43
CBX3-206ENST00000481057 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
CBX3-206ENST00000481057 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
CBX3-206ENST00000481057 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
CBX3-206ENST00000481057 ANKLE1Q8NAG6 615 aa12.37□□□□□ -0.43
CBX3-206ENST00000481057 TRIM34Q9BYJ4 488 aa12.37□□□□□ -0.43
CBX3-206ENST00000481057 EVA1BQ9NVM1 165 aa12.37□□□□□ -0.43
CBX3-206ENST00000481057 MAP10Q9P2G4 905 aa12.37□□□□□ -0.43
CBX3-206ENST00000481057 APBB1O00213 710 aa12.36□□□□□ -0.43
CBX3-206ENST00000481057 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
CBX3-206ENST00000481057 A0A0G2JS52 829 aa12.35□□□□□ -0.43
CBX3-206ENST00000481057 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
CBX3-206ENST00000481057 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
CBX3-206ENST00000481057 CTHP32929 405 aa12.34□□□□□ -0.43
CBX3-206ENST00000481057 NR6A1Q15406 480 aa12.34□□□□□ -0.43
CBX3-206ENST00000481057 EPS8L1Q8TE68 723 aa12.34□□□□□ -0.43
CBX3-206ENST00000481057 DIP2BQ9P265 1576 aa12.34□□□□□ -0.43
CBX3-206ENST00000481057 TSPOAP1O95153 1857 aa12.34□□□□□ -0.43
CBX3-206ENST00000481057 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
CBX3-206ENST00000481057 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
CBX3-206ENST00000481057 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CBX3-206ENST00000481057 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
CBX3-206ENST00000481057 PTCRAQ6ISU1 281 aaPredicted RBP12.31□□□□□ -0.44
CBX3-206ENST00000481057 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
CBX3-206ENST00000481057 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
CBX3-206ENST00000481057 UNC93B1Q9H1C4 597 aa12.3□□□□□ -0.44
CBX3-206ENST00000481057 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
CBX3-206ENST00000481057 POM121Q96HA1 1249 aa12.29□□□□□ -0.44
CBX3-206ENST00000481057 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
CBX3-206ENST00000481057 COG6Q9Y2V7 657 aa12.29□□□□□ -0.44
CBX3-206ENST00000481057 GPR37L1O60883 481 aa12.28□□□□□ -0.44
CBX3-206ENST00000481057 TOP2BQ02880 1626 aa12.27□□□□□ -0.44
CBX3-206ENST00000481057 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
CBX3-206ENST00000481057 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
CBX3-206ENST00000481057 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.45
CBX3-206ENST00000481057 ERICH6Q7L0X2 663 aa12.26□□□□□ -0.45
CBX3-206ENST00000481057 CLUAP1Q96AJ1 413 aa12.26□□□□□ -0.45
CBX3-206ENST00000481057 FKBPLQ9UIM3 349 aa12.26□□□□□ -0.45
CBX3-206ENST00000481057 RAD21O60216 631 aa12.25□□□□□ -0.45
CBX3-206ENST00000481057 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
CBX3-206ENST00000481057 ARMC2Q8NEN0 867 aa12.25□□□□□ -0.45
CBX3-206ENST00000481057 EMID1Q96A84 441 aaPredicted RBP12.25□□□□□ -0.45
CBX3-206ENST00000481057 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
CBX3-206ENST00000481057 ZC3H4Q9UPT8 1303 aaKnown RBP12.24□□□□□ -0.45
CBX3-206ENST00000481057 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
CBX3-206ENST00000481057 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
CBX3-206ENST00000481057 RPIAP49247 311 aa12.23□□□□□ -0.45
CBX3-206ENST00000481057 TRIM32Q13049 653 aa12.22□□□□□ -0.45
CBX3-206ENST00000481057 NBPF14Q5TI25 921 aa12.22□□□□□ -0.45
CBX3-206ENST00000481057 LIAT1Q6ZQX7 453 aa12.22□□□□□ -0.45
CBX3-206ENST00000481057 GPKOWQ92917 476 aaPredicted RBP eCLIP12.22□□□□□ -0.45
CBX3-206ENST00000481057 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.45
CBX3-206ENST00000481057 A6NJR5 290 aa12.21□□□□□ -0.45
CBX3-206ENST00000481057 ABL2P42684 1182 aa12.21□□□□□ -0.45
CBX3-206ENST00000481057 IRF5Q13568 498 aa12.2□□□□□ -0.46
CBX3-206ENST00000481057 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
CBX3-206ENST00000481057 BAP1Q92560 729 aa12.2□□□□□ -0.46
CBX3-206ENST00000481057 ZMYND15Q9H091 742 aa12.2□□□□□ -0.46
CBX3-206ENST00000481057 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
CBX3-206ENST00000481057 ABCC8Q09428 1581 aa12.18□□□□□ -0.46
CBX3-206ENST00000481057 SLC19A1P41440 591 aa12.18□□□□□ -0.46
CBX3-206ENST00000481057 ZNF511Q8NB15 262 aa12.18□□□□□ -0.46
CBX3-206ENST00000481057 PDXDC2PQ6P474 469 aa12.17□□□□□ -0.46
CBX3-206ENST00000481057 CEP170Q5SW79 1584 aa12.17□□□□□ -0.46
CBX3-206ENST00000481057 COL17A1Q9UMD9 1497 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms