RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ATP6V1AP38606 617 aa10.82□□□□□ -0.68
LRCH3-216ENST00000481048 SULF1Q8IWU6 871 aa10.82□□□□□ -0.68
LRCH3-216ENST00000481048 GDF9O60383 454 aa10.81□□□□□ -0.68
LRCH3-216ENST00000481048 GCGRP47871 477 aa10.81□□□□□ -0.68
LRCH3-216ENST00000481048 MYT1Q01538 1121 aa10.81□□□□□ -0.68
LRCH3-216ENST00000481048 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
LRCH3-216ENST00000481048 PHLDB1Q86UU1 1377 aa10.79□□□□□ -0.68
LRCH3-216ENST00000481048 FAM187AA6NFU0 413 aa10.79□□□□□ -0.68
LRCH3-216ENST00000481048 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
LRCH3-216ENST00000481048 KDM2AQ9Y2K7 1162 aa10.79□□□□□ -0.68
LRCH3-216ENST00000481048 FMNL1O95466 1100 aaPredicted RBP10.78□□□□□ -0.68
LRCH3-216ENST00000481048 ATP10BO94823 1461 aa10.78□□□□□ -0.68
LRCH3-216ENST00000481048 SAMD9Q5K651 1589 aa10.77□□□□□ -0.68
LRCH3-216ENST00000481048 ADGRL1O94910 1474 aa10.77□□□□□ -0.69
LRCH3-216ENST00000481048 FOXC1Q12948 553 aa10.77□□□□□ -0.69
LRCH3-216ENST00000481048 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
LRCH3-216ENST00000481048 FAM160A2Q8N612 972 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-216ENST00000481048 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
LRCH3-216ENST00000481048 ABCA9Q8IUA7 1624 aa10.75□□□□□ -0.69
LRCH3-216ENST00000481048 RAPGEF6Q8TEU7 1601 aa10.75□□□□□ -0.69
LRCH3-216ENST00000481048 RPIAP49247 311 aa10.74□□□□□ -0.69
LRCH3-216ENST00000481048 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
LRCH3-216ENST00000481048 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
LRCH3-216ENST00000481048 CD2BP2O95400 341 aaKnown RBP10.73□□□□□ -0.69
LRCH3-216ENST00000481048 GRIPAP1Q4V328 841 aa10.73□□□□□ -0.69
LRCH3-216ENST00000481048 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
LRCH3-216ENST00000481048 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
LRCH3-216ENST00000481048 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
LRCH3-216ENST00000481048 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.69
LRCH3-216ENST00000481048 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.69
LRCH3-216ENST00000481048 RNF19BQ6ZMZ0 732 aa10.71□□□□□ -0.69
LRCH3-216ENST00000481048 NEO1Q92859 1461 aa10.71□□□□□ -0.69
LRCH3-216ENST00000481048 KIF21BO75037 1637 aa10.7□□□□□ -0.7
LRCH3-216ENST00000481048 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
LRCH3-216ENST00000481048 POTECB2RU33 542 aa10.7□□□□□ -0.7
LRCH3-216ENST00000481048 EFCAB5A4FU69 1503 aa10.69□□□□□ -0.7
LRCH3-216ENST00000481048 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
LRCH3-216ENST00000481048 MAP2K5Q13163 448 aa10.69□□□□□ -0.7
LRCH3-216ENST00000481048 NUP153P49790 1475 aaKnown RBP10.68□□□□□ -0.7
LRCH3-216ENST00000481048 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
LRCH3-216ENST00000481048 CD46P15529 392 aa10.68□□□□□ -0.7
LRCH3-216ENST00000481048 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
LRCH3-216ENST00000481048 ZBTB24O43167 697 aaPredicted RBP10.67□□□□□ -0.7
LRCH3-216ENST00000481048 Q3C1V9 767 aa10.67□□□□□ -0.7
LRCH3-216ENST00000481048 AAASQ9NRG9 546 aa10.67□□□□□ -0.7
LRCH3-216ENST00000481048 FHOD3Q2V2M9 1422 aa10.67□□□□□ -0.7
LRCH3-216ENST00000481048 IRF6O14896 467 aa10.66□□□□□ -0.7
LRCH3-216ENST00000481048 CYP4X1Q8N118 509 aa10.66□□□□□ -0.7
LRCH3-216ENST00000481048 KDM4AO75164 1064 aa10.65□□□□□ -0.7
LRCH3-216ENST00000481048 RAPGEF3O95398 923 aa10.65□□□□□ -0.7
LRCH3-216ENST00000481048 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
LRCH3-216ENST00000481048 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
LRCH3-216ENST00000481048 TOR4AQ9NXH8 423 aa10.65□□□□□ -0.7
LRCH3-216ENST00000481048 CFAP74Q9C0B2 1584 aa10.64□□□□□ -0.71
LRCH3-216ENST00000481048 HECW2Q9P2P5 1572 aa10.64□□□□□ -0.71
LRCH3-216ENST00000481048 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
LRCH3-216ENST00000481048 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
LRCH3-216ENST00000481048 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
LRCH3-216ENST00000481048 ADAMTSL3P82987 1691 aa10.62□□□□□ -0.71
LRCH3-216ENST00000481048 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
LRCH3-216ENST00000481048 RICTORQ6R327 1708 aa10.61□□□□□ -0.71
LRCH3-216ENST00000481048 FMN1Q68DA7 1419 aa10.61□□□□□ -0.71
LRCH3-216ENST00000481048 AKNAQ7Z591 1439 aa10.61□□□□□ -0.71
LRCH3-216ENST00000481048 MMP16P51512 607 aa10.61□□□□□ -0.71
LRCH3-216ENST00000481048 USB1Q9BQ65 265 aaKnown RBP10.61□□□□□ -0.71
LRCH3-216ENST00000481048 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
LRCH3-216ENST00000481048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.61□□□□□ -0.71
LRCH3-216ENST00000481048 FANCAO15360 1455 aa10.61□□□□□ -0.71
LRCH3-216ENST00000481048 TTC24A2A3L6 582 aaPredicted RBP10.6□□□□□ -0.71
LRCH3-216ENST00000481048 HLA-CQ95604 372 aa10.6□□□□□ -0.71
LRCH3-216ENST00000481048 FRMPD1Q5SYB0 1578 aa10.6□□□□□ -0.71
LRCH3-216ENST00000481048 BCORL1Q5H9F3 1711 aa10.59□□□□□ -0.71
LRCH3-216ENST00000481048 AVPP01185 164 aa10.59□□□□□ -0.71
LRCH3-216ENST00000481048 USP46P62068 366 aa10.59□□□□□ -0.71
LRCH3-216ENST00000481048 CRIPAKQ8N1N5 446 aa10.59□□□□□ -0.71
LRCH3-216ENST00000481048 CCDC102AQ96A19 550 aa10.59□□□□□ -0.71
LRCH3-216ENST00000481048 PTPRMP28827 1452 aa10.58□□□□□ -0.72
LRCH3-216ENST00000481048 MAGI2Q86UL8 1455 aa10.58□□□□□ -0.72
LRCH3-216ENST00000481048 AXIN1O15169 862 aa10.58□□□□□ -0.72
LRCH3-216ENST00000481048 TRIM32Q13049 653 aa10.58□□□□□ -0.72
LRCH3-216ENST00000481048 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
LRCH3-216ENST00000481048 PLCH2O75038 1416 aa10.58□□□□□ -0.72
LRCH3-216ENST00000481048 ARID4BQ4LE39 1312 aaPredicted RBP10.58□□□□□ -0.72
LRCH3-216ENST00000481048 WNT7AO00755 349 aa10.57□□□□□ -0.72
LRCH3-216ENST00000481048 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
LRCH3-216ENST00000481048 HECW1Q76N89 1606 aa10.57□□□□□ -0.72
LRCH3-216ENST00000481048 HOXA2O43364 376 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 EFCAB2Q5VUJ9 269 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 CDK13Q14004 1512 aaKnown RBP10.56□□□□□ -0.72
LRCH3-216ENST00000481048 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 ARHGEF40Q8TER5 1519 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 POGZQ7Z3K3 1410 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 TTC37Q6PGP7 1564 aa10.56□□□□□ -0.72
LRCH3-216ENST00000481048 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
LRCH3-216ENST00000481048 CTC1Q2NKJ3 1217 aa10.55□□□□□ -0.72
LRCH3-216ENST00000481048 GPCPD1Q9NPB8 672 aa10.55□□□□□ -0.72
LRCH3-216ENST00000481048 SETD1BQ9UPS6 1966 aaKnown RBP10.55□□□□□ -0.72
LRCH3-216ENST00000481048 MYO5CQ9NQX4 1742 aa10.55□□□□□ -0.72
LRCH3-216ENST00000481048 CLCN1P35523 988 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms