RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 POGKQ9P215 609 aa10.43□□□□□ -0.74
COL17A1-205ENST00000480127 RGPD1P0DJD0 1748 aa10.43□□□□□ -0.74
COL17A1-205ENST00000480127 THSD7AQ9UPZ6 1657 aa10.43□□□□□ -0.74
COL17A1-205ENST00000480127 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
COL17A1-205ENST00000480127 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
COL17A1-205ENST00000480127 ADGRB1O14514 1584 aa10.42□□□□□ -0.74
COL17A1-205ENST00000480127 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
COL17A1-205ENST00000480127 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
COL17A1-205ENST00000480127 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
COL17A1-205ENST00000480127 CAMKK2Q96RR4 588 aa10.41□□□□□ -0.74
COL17A1-205ENST00000480127 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
COL17A1-205ENST00000480127 TULP4Q9NRJ4 1543 aa10.4□□□□□ -0.74
COL17A1-205ENST00000480127 TRAK1Q9UPV9 953 aa10.4□□□□□ -0.74
COL17A1-205ENST00000480127 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
COL17A1-205ENST00000480127 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
COL17A1-205ENST00000480127 TRIM37O94972 964 aa10.39□□□□□ -0.75
COL17A1-205ENST00000480127 PRDM11Q9NQV5 511 aa10.39□□□□□ -0.75
COL17A1-205ENST00000480127 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
COL17A1-205ENST00000480127 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
COL17A1-205ENST00000480127 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
COL17A1-205ENST00000480127 NGDNQ8NEJ9 315 aaKnown RBP10.38□□□□□ -0.75
COL17A1-205ENST00000480127 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
COL17A1-205ENST00000480127 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
COL17A1-205ENST00000480127 APBA3O96018 575 aa10.36□□□□□ -0.75
COL17A1-205ENST00000480127 STRN4Q9NRL3 753 aa10.36□□□□□ -0.75
COL17A1-205ENST00000480127 PARD3Q8TEW0 1356 aa10.36□□□□□ -0.75
COL17A1-205ENST00000480127 ZC3H6P61129 1189 aaKnown RBP10.35□□□□□ -0.75
COL17A1-205ENST00000480127 BARGINQ6ZT62 677 aa10.35□□□□□ -0.75
COL17A1-205ENST00000480127 ATP7BP35670 1465 aa10.35□□□□□ -0.75
COL17A1-205ENST00000480127 PHRF1Q9P1Y6 1649 aaKnown RBP10.34□□□□□ -0.75
COL17A1-205ENST00000480127 NUTM2GQ5VZR2 741 aa10.34□□□□□ -0.75
COL17A1-205ENST00000480127 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
COL17A1-205ENST00000480127 USP35Q9P2H5 1018 aa10.34□□□□□ -0.75
COL17A1-205ENST00000480127 KDM2AQ9Y2K7 1162 aa10.34□□□□□ -0.75
COL17A1-205ENST00000480127 RREB1Q92766 1687 aa10.34□□□□□ -0.75
COL17A1-205ENST00000480127 SSH2Q76I76 1423 aa10.33□□□□□ -0.76
COL17A1-205ENST00000480127 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
COL17A1-205ENST00000480127 CAMTA1Q9Y6Y1 1673 aa10.32□□□□□ -0.76
COL17A1-205ENST00000480127 POLR3AO14802 1390 aaPredicted RBP10.32□□□□□ -0.76
COL17A1-205ENST00000480127 EVA1CP58658 441 aa10.32□□□□□ -0.76
COL17A1-205ENST00000480127 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
COL17A1-205ENST00000480127 LARP1Q6PKG0 1096 aaKnown RBP10.32□□□□□ -0.76
COL17A1-205ENST00000480127 DCAF11Q8TEB1 546 aa10.32□□□□□ -0.76
COL17A1-205ENST00000480127 ITSN1Q15811 1721 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 YY1P25490 414 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 NBPF8Q3BBV2 869 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 NBPF14Q5TI25 921 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 CDK19Q9BWU1 502 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 LMO7Q8WWI1 1683 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 ACEP12821 1306 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 NRKQ7Z2Y5 1582 aa10.31□□□□□ -0.76
COL17A1-205ENST00000480127 ARHGEF28Q8N1W1 1705 aaKnown RBP10.3□□□□□ -0.76
COL17A1-205ENST00000480127 CPDO75976 1380 aa10.3□□□□□ -0.76
COL17A1-205ENST00000480127 RAB3GAP2Q9H2M9 1393 aa10.3□□□□□ -0.76
COL17A1-205ENST00000480127 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
COL17A1-205ENST00000480127 STAC3Q96MF2 364 aa10.3□□□□□ -0.76
COL17A1-205ENST00000480127 USP19O94966 1318 aa10.3□□□□□ -0.76
COL17A1-205ENST00000480127 TOPAZ1Q8N9V7 1692 aa10.29□□□□□ -0.76
COL17A1-205ENST00000480127 SPON1Q9HCB6 807 aa10.29□□□□□ -0.76
COL17A1-205ENST00000480127 THRAP3Q9Y2W1 955 aaKnown RBP10.29□□□□□ -0.76
COL17A1-205ENST00000480127 CCDC61Q9Y6R9 512 aa10.29□□□□□ -0.76
COL17A1-205ENST00000480127 KCNQ2O43526 872 aa10.28□□□□□ -0.76
COL17A1-205ENST00000480127 ABTB2Q8N961 1025 aa10.28□□□□□ -0.76
COL17A1-205ENST00000480127 COL5A2P05997 1499 aaPredicted RBP10.27□□□□□ -0.77
COL17A1-205ENST00000480127 PARP4Q9UKK3 1724 aaKnown RBP10.27□□□□□ -0.77
COL17A1-205ENST00000480127 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
COL17A1-205ENST00000480127 GCP02774 474 aa10.26□□□□□ -0.77
COL17A1-205ENST00000480127 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
COL17A1-205ENST00000480127 PEAK1Q9H792 1746 aa10.26□□□□□ -0.77
COL17A1-205ENST00000480127 C11orf95C9JLR9 678 aaPredicted RBP10.25□□□□□ -0.77
COL17A1-205ENST00000480127 PLSCR1O15162 318 aa10.25□□□□□ -0.77
COL17A1-205ENST00000480127 PTF1AQ7RTS3 328 aa10.25□□□□□ -0.77
COL17A1-205ENST00000480127 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
COL17A1-205ENST00000480127 ANO8Q9HCE9 1232 aaPredicted RBP10.25□□□□□ -0.77
COL17A1-205ENST00000480127 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
COL17A1-205ENST00000480127 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
COL17A1-205ENST00000480127 CRB1P82279 1406 aa10.24□□□□□ -0.77
COL17A1-205ENST00000480127 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
COL17A1-205ENST00000480127 PDGFDQ9GZP0 370 aaPredicted RBP10.24□□□□□ -0.77
COL17A1-205ENST00000480127 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
COL17A1-205ENST00000480127 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
COL17A1-205ENST00000480127 PROM2Q8N271 834 aa10.23□□□□□ -0.77
COL17A1-205ENST00000480127 RGPD3A6NKT7 1758 aaPredicted RBP10.23□□□□□ -0.77
COL17A1-205ENST00000480127 RGPD4Q7Z3J3 1758 aa10.23□□□□□ -0.77
COL17A1-205ENST00000480127 CASZ1Q86V15 1759 aa10.23□□□□□ -0.77
COL17A1-205ENST00000480127 AATKQ6ZMQ8 1374 aa10.23□□□□□ -0.77
COL17A1-205ENST00000480127 LRRC37A3O60309 1634 aa10.22□□□□□ -0.77
COL17A1-205ENST00000480127 DCAF8L1A6NGE4 600 aa10.22□□□□□ -0.77
COL17A1-205ENST00000480127 DDB1Q16531 1140 aa10.22□□□□□ -0.77
COL17A1-205ENST00000480127 BCL11BQ9C0K0 894 aaPredicted RBP10.22□□□□□ -0.77
COL17A1-205ENST00000480127 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
COL17A1-205ENST00000480127 SLIT3O75094 1523 aa10.22□□□□□ -0.77
COL17A1-205ENST00000480127 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
COL17A1-205ENST00000480127 PTGER2P43116 358 aa10.21□□□□□ -0.77
COL17A1-205ENST00000480127 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
COL17A1-205ENST00000480127 MARCH10Q8NA82 808 aaPredicted RBP10.21□□□□□ -0.77
COL17A1-205ENST00000480127 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
COL17A1-205ENST00000480127 BRD4O60885 1362 aaPredicted RBP10.21□□□□□ -0.78
COL17A1-205ENST00000480127 SBF2Q86WG5 1849 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms