RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 TRIM52Q96A61 297 aa10.95□□□□□ -0.66
SSR1-206ENST00000479365 NEXMIFQ5QGS0 1516 aa10.94□□□□□ -0.66
SSR1-206ENST00000479365 PIK3R4Q99570 1358 aa10.94□□□□□ -0.66
SSR1-206ENST00000479365 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
SSR1-206ENST00000479365 ARXQ96QS3 562 aa10.94□□□□□ -0.66
SSR1-206ENST00000479365 ROBO1Q9Y6N7 1651 aa10.94□□□□□ -0.66
SSR1-206ENST00000479365 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
SSR1-206ENST00000479365 MSH6P52701 1360 aa10.93□□□□□ -0.66
SSR1-206ENST00000479365 SOCS7O14512 581 aa10.93□□□□□ -0.66
SSR1-206ENST00000479365 ZNF326Q5BKZ1 582 aaKnown RBP10.93□□□□□ -0.66
SSR1-206ENST00000479365 METP08581 1390 aa10.92□□□□□ -0.66
SSR1-206ENST00000479365 SLAIN2Q9P270 581 aa10.92□□□□□ -0.66
SSR1-206ENST00000479365 AMOTL2Q9Y2J4 779 aa10.92□□□□□ -0.66
SSR1-206ENST00000479365 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
SSR1-206ENST00000479365 NCOA3Q9Y6Q9 1424 aa10.92□□□□□ -0.66
SSR1-206ENST00000479365 TMEM132AQ24JP5 1023 aa10.9□□□□□ -0.66
SSR1-206ENST00000479365 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.89□□□□□ -0.67
SSR1-206ENST00000479365 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
SSR1-206ENST00000479365 C19orf44Q9H6X5 657 aa10.88□□□□□ -0.67
SSR1-206ENST00000479365 RGS17Q9UGC6 210 aaPredicted RBP10.88□□□□□ -0.67
SSR1-206ENST00000479365 KIF1BO60333 1816 aa10.88□□□□□ -0.67
SSR1-206ENST00000479365 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
SSR1-206ENST00000479365 MPHOSPH9Q99550 1183 aa10.87□□□□□ -0.67
SSR1-206ENST00000479365 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
SSR1-206ENST00000479365 SETD1AO15047 1707 aaKnown RBP10.87□□□□□ -0.67
SSR1-206ENST00000479365 CADPS2Q86UW7 1296 aa10.86□□□□□ -0.67
SSR1-206ENST00000479365 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
SSR1-206ENST00000479365 COL16A1Q07092 1604 aaPredicted RBP10.86□□□□□ -0.67
SSR1-206ENST00000479365 PHLPP1O60346 1717 aa10.86□□□□□ -0.67
SSR1-206ENST00000479365 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
SSR1-206ENST00000479365 ATF3P18847 181 aa10.85□□□□□ -0.67
SSR1-206ENST00000479365 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 DCCP43146 1447 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 MST1RQ04912 1400 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 BRINP3Q76B58 766 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 L3MBTL3Q96JM7 780 aaPredicted RBP10.84□□□□□ -0.67
SSR1-206ENST00000479365 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
SSR1-206ENST00000479365 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 PPLO60437 1756 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 AHDC1Q5TGY3 1603 aaPredicted RBP10.84□□□□□ -0.67
SSR1-206ENST00000479365 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 ADGRL3Q9HAR2 1447 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
SSR1-206ENST00000479365 G3V3G9 751 aa10.83□□□□□ -0.68
SSR1-206ENST00000479365 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
SSR1-206ENST00000479365 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
SSR1-206ENST00000479365 JCADQ9P266 1359 aa10.82□□□□□ -0.68
SSR1-206ENST00000479365 TMEM121BQ9BXQ6 578 aaPredicted RBP10.82□□□□□ -0.68
SSR1-206ENST00000479365 ASXL1Q8IXJ9 1541 aa10.82□□□□□ -0.68
SSR1-206ENST00000479365 PTCH1Q13635 1447 aa10.82□□□□□ -0.68
SSR1-206ENST00000479365 PRAG1Q86YV5 1406 aa10.82□□□□□ -0.68
SSR1-206ENST00000479365 LRP6O75581 1613 aa10.81□□□□□ -0.68
SSR1-206ENST00000479365 RAB3GAP2Q9H2M9 1393 aa10.81□□□□□ -0.68
SSR1-206ENST00000479365 RGL3Q3MIN7 710 aa10.81□□□□□ -0.68
SSR1-206ENST00000479365 POTEAQ6S8J7 498 aa10.8□□□□□ -0.68
SSR1-206ENST00000479365 IFT172Q9UG01 1749 aa10.8□□□□□ -0.68
SSR1-206ENST00000479365 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
SSR1-206ENST00000479365 DDX17Q92841 729 aaKnown RBP10.78□□□□□ -0.68
SSR1-206ENST00000479365 C1orf167Q5SNV9 1468 aa10.78□□□□□ -0.68
SSR1-206ENST00000479365 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.68
SSR1-206ENST00000479365 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.68
SSR1-206ENST00000479365 SHPRHQ149N8 1683 aa10.77□□□□□ -0.69
SSR1-206ENST00000479365 ORAI2Q96SN7 254 aa10.76□□□□□ -0.69
SSR1-206ENST00000479365 SPATA31A6Q5VVP1 1343 aa10.76□□□□□ -0.69
SSR1-206ENST00000479365 LRPPRCP42704 1394 aaKnown RBP10.76□□□□□ -0.69
SSR1-206ENST00000479365 TECPR2O15040 1411 aa10.75□□□□□ -0.69
SSR1-206ENST00000479365 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
SSR1-206ENST00000479365 TMEM132EQ6IEE7 984 aa10.75□□□□□ -0.69
SSR1-206ENST00000479365 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
SSR1-206ENST00000479365 STK26Q9P289 416 aa10.75□□□□□ -0.69
SSR1-206ENST00000479365 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
SSR1-206ENST00000479365 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
SSR1-206ENST00000479365 WAPLQ7Z5K2 1190 aa10.74□□□□□ -0.69
SSR1-206ENST00000479365 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
SSR1-206ENST00000479365 MYOM2P54296 1465 aa10.74□□□□□ -0.69
SSR1-206ENST00000479365 CDC42BPGQ6DT37 1551 aa10.73□□□□□ -0.69
SSR1-206ENST00000479365 LAMC1P11047 1609 aa10.73□□□□□ -0.69
SSR1-206ENST00000479365 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
SSR1-206ENST00000479365 ABCC11Q96J66 1382 aa10.73□□□□□ -0.69
SSR1-206ENST00000479365 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
SSR1-206ENST00000479365 NUTM2BA6NNL0 878 aaPredicted RBP10.72□□□□□ -0.69
SSR1-206ENST00000479365 NUTM2EB1AL46 878 aaPredicted RBP10.72□□□□□ -0.69
SSR1-206ENST00000479365 CFAP70Q5T0N1 1121 aa10.72□□□□□ -0.69
SSR1-206ENST00000479365 NUTM2AQ8IVF1 878 aaPredicted RBP10.72□□□□□ -0.69
SSR1-206ENST00000479365 LRRC59Q96AG4 307 aaKnown RBP10.72□□□□□ -0.69
SSR1-206ENST00000479365 C14orf93Q9H972 538 aaKnown RBP10.72□□□□□ -0.69
SSR1-206ENST00000479365 KNDC1Q76NI1 1749 aa10.72□□□□□ -0.69
SSR1-206ENST00000479365 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
SSR1-206ENST00000479365 MEX3CQ5U5Q3 659 aaKnown RBP10.71□□□□□ -0.69
SSR1-206ENST00000479365 LHX8Q68G74 356 aa10.71□□□□□ -0.69
SSR1-206ENST00000479365 CRISPLD2Q9H0B8 497 aa10.71□□□□□ -0.69
SSR1-206ENST00000479365 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
SSR1-206ENST00000479365 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
SSR1-206ENST00000479365 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
SSR1-206ENST00000479365 HRCP23327 699 aa10.69□□□□□ -0.7
SSR1-206ENST00000479365 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
SSR1-206ENST00000479365 ADGRB1O14514 1584 aa10.69□□□□□ -0.7
SSR1-206ENST00000479365 PXDNQ92626 1479 aa10.68□□□□□ -0.7
SSR1-206ENST00000479365 ESCO1Q5FWF5 840 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms