RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
CHD3-210ENST00000479080 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
CHD3-210ENST00000479080 KIF20BQ96Q89 1820 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 FYB1O15117 783 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 ILDR2Q71H61 639 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 NME9Q86XW9 330 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
CHD3-210ENST00000479080 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
CHD3-210ENST00000479080 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
CHD3-210ENST00000479080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHD3-210ENST00000479080 USP54Q70EL1 1684 aa17.96■□□□□ 0.47
CHD3-210ENST00000479080 ALS2Q96Q42 1657 aa17.96■□□□□ 0.47
CHD3-210ENST00000479080 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
CHD3-210ENST00000479080 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
CHD3-210ENST00000479080 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
CHD3-210ENST00000479080 KRT28Q7Z3Y7 464 aa17.95■□□□□ 0.46
CHD3-210ENST00000479080 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
CHD3-210ENST00000479080 SOS2Q07890 1332 aaPredicted RBP17.95■□□□□ 0.46
CHD3-210ENST00000479080 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
CHD3-210ENST00000479080 BRD4O60885 1362 aaPredicted RBP17.94■□□□□ 0.46
CHD3-210ENST00000479080 NSD2O96028 1365 aa17.94■□□□□ 0.46
CHD3-210ENST00000479080 MIER1Q8N108 512 aa17.94■□□□□ 0.46
CHD3-210ENST00000479080 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
CHD3-210ENST00000479080 TTC21AQ8NDW8 1320 aa17.94■□□□□ 0.46
CHD3-210ENST00000479080 USP31Q70CQ4 1352 aa17.93■□□□□ 0.46
CHD3-210ENST00000479080 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
CHD3-210ENST00000479080 SBNO1A3KN83 1393 aa17.92■□□□□ 0.46
CHD3-210ENST00000479080 COL16A1Q07092 1604 aaPredicted RBP17.91■□□□□ 0.46
CHD3-210ENST00000479080 TNS3Q68CZ2 1445 aa17.91■□□□□ 0.46
CHD3-210ENST00000479080 TOM1O60784 492 aa17.91■□□□□ 0.46
CHD3-210ENST00000479080 PSME1Q06323 249 aa17.91■□□□□ 0.46
CHD3-210ENST00000479080 MED1Q15648 1581 aaPredicted RBP17.9■□□□□ 0.46
CHD3-210ENST00000479080 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.46
CHD3-210ENST00000479080 SPATA31A3Q5VYP0 1347 aa17.89■□□□□ 0.45
CHD3-210ENST00000479080 SLIT3O75094 1523 aa17.88■□□□□ 0.45
CHD3-210ENST00000479080 ANP32CO43423 234 aa17.88■□□□□ 0.45
CHD3-210ENST00000479080 PIP4K2BP78356 416 aa17.88■□□□□ 0.45
CHD3-210ENST00000479080 CCDC184Q52MB2 194 aa17.88■□□□□ 0.45
CHD3-210ENST00000479080 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
CHD3-210ENST00000479080 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
CHD3-210ENST00000479080 FBLN1P23142 703 aa17.87■□□□□ 0.45
CHD3-210ENST00000479080 USP19O94966 1318 aa17.87■□□□□ 0.45
CHD3-210ENST00000479080 NFAT5O94916 1531 aa17.87■□□□□ 0.45
CHD3-210ENST00000479080 RALBP1Q15311 655 aa17.86■□□□□ 0.45
CHD3-210ENST00000479080 PHLPP1O60346 1717 aa17.85■□□□□ 0.45
CHD3-210ENST00000479080 PPP2R1AP30153 589 aa17.85■□□□□ 0.45
CHD3-210ENST00000479080 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
CHD3-210ENST00000479080 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
CHD3-210ENST00000479080 PHRF1Q9P1Y6 1649 aaKnown RBP17.84■□□□□ 0.45
CHD3-210ENST00000479080 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
CHD3-210ENST00000479080 MYBBP1AQ9BQG0 1328 aaKnown RBP17.84■□□□□ 0.45
CHD3-210ENST00000479080 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
CHD3-210ENST00000479080 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.44
CHD3-210ENST00000479080 NLRP6P59044 892 aa17.83■□□□□ 0.44
CHD3-210ENST00000479080 COG3Q96JB2 828 aa17.83■□□□□ 0.44
CHD3-210ENST00000479080 ABCA3Q99758 1704 aa17.83■□□□□ 0.44
CHD3-210ENST00000479080 AATKQ6ZMQ8 1374 aa17.82■□□□□ 0.44
CHD3-210ENST00000479080 PEAK1Q9H792 1746 aa17.82■□□□□ 0.44
CHD3-210ENST00000479080 COL22A1Q8NFW1 1626 aaPredicted RBP17.82■□□□□ 0.44
CHD3-210ENST00000479080 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
CHD3-210ENST00000479080 COL3A1P02461 1466 aaPredicted RBP17.81■□□□□ 0.44
CHD3-210ENST00000479080 ARHGEF10O15013 1369 aa17.8■□□□□ 0.44
CHD3-210ENST00000479080 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
CHD3-210ENST00000479080 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
CHD3-210ENST00000479080 RRS1Q15050 365 aaKnown RBP17.78■□□□□ 0.44
CHD3-210ENST00000479080 LMOD2Q6P5Q4 547 aa17.78■□□□□ 0.44
CHD3-210ENST00000479080 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
CHD3-210ENST00000479080 CABLES1Q8TDN4 633 aa17.78■□□□□ 0.44
CHD3-210ENST00000479080 MAP3K19Q56UN5 1328 aa17.76■□□□□ 0.43
CHD3-210ENST00000479080 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
CHD3-210ENST00000479080 SOX12O15370 315 aa17.76■□□□□ 0.43
CHD3-210ENST00000479080 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
CHD3-210ENST00000479080 GCP02774 474 aa17.75■□□□□ 0.43
CHD3-210ENST00000479080 MTHFSP49914 203 aa17.75■□□□□ 0.43
CHD3-210ENST00000479080 LRRC59Q96AG4 307 aaKnown RBP17.75■□□□□ 0.43
CHD3-210ENST00000479080 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
CHD3-210ENST00000479080 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
CHD3-210ENST00000479080 HSPA1LP34931 641 aa17.74■□□□□ 0.43
CHD3-210ENST00000479080 MAP2P11137 1827 aaKnown RBP17.73■□□□□ 0.43
CHD3-210ENST00000479080 INSRP06213 1382 aa17.73■□□□□ 0.43
CHD3-210ENST00000479080 COL18A1P39060 1754 aa17.72■□□□□ 0.43
CHD3-210ENST00000479080 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
CHD3-210ENST00000479080 LTN1O94822 1766 aa17.71■□□□□ 0.43
CHD3-210ENST00000479080 CPDO75976 1380 aa17.7■□□□□ 0.42
CHD3-210ENST00000479080 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
CHD3-210ENST00000479080 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
CHD3-210ENST00000479080 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
CHD3-210ENST00000479080 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
CHD3-210ENST00000479080 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
CHD3-210ENST00000479080 JCADQ9P266 1359 aa17.68■□□□□ 0.42
CHD3-210ENST00000479080 HOXC9P31274 260 aa17.68■□□□□ 0.42
CHD3-210ENST00000479080 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
CHD3-210ENST00000479080 LRP6O75581 1613 aa17.68■□□□□ 0.42
CHD3-210ENST00000479080 FLT4P35916 1363 aa17.67■□□□□ 0.42
CHD3-210ENST00000479080 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
CHD3-210ENST00000479080 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
CHD3-210ENST00000479080 ABCC6O95255 1503 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms