RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 CENPJQ9HC77 1338 aaPredicted RBP12.55□□□□□ -0.4
XRCC6-208ENST00000478914 GLI3P10071 1580 aa12.55□□□□□ -0.4
XRCC6-208ENST00000478914 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
XRCC6-208ENST00000478914 RALGAPBQ86X10 1494 aa12.54□□□□□ -0.4
XRCC6-208ENST00000478914 SIN3AQ96ST3 1273 aa12.54□□□□□ -0.4
XRCC6-208ENST00000478914 PHRF1Q9P1Y6 1649 aaKnown RBP12.54□□□□□ -0.4
XRCC6-208ENST00000478914 SRPK2P78362 688 aaKnown RBP12.53□□□□□ -0.4
XRCC6-208ENST00000478914 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
XRCC6-208ENST00000478914 VPS72Q15906 364 aa12.52□□□□□ -0.41
XRCC6-208ENST00000478914 FAM83GA6ND36 823 aa12.51□□□□□ -0.41
XRCC6-208ENST00000478914 ACEP12821 1306 aa12.51□□□□□ -0.41
XRCC6-208ENST00000478914 POLR3AO14802 1390 aaPredicted RBP12.51□□□□□ -0.41
XRCC6-208ENST00000478914 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
XRCC6-208ENST00000478914 A0A0G2JS52 829 aa12.5□□□□□ -0.41
XRCC6-208ENST00000478914 PLEKHG3A1L390 1219 aa12.5□□□□□ -0.41
XRCC6-208ENST00000478914 MYT1Q01538 1121 aa12.5□□□□□ -0.41
XRCC6-208ENST00000478914 PRDM11Q9NQV5 511 aa12.5□□□□□ -0.41
XRCC6-208ENST00000478914 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
XRCC6-208ENST00000478914 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
XRCC6-208ENST00000478914 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
XRCC6-208ENST00000478914 EVC2Q86UK5 1308 aa12.48□□□□□ -0.41
XRCC6-208ENST00000478914 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
XRCC6-208ENST00000478914 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
XRCC6-208ENST00000478914 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
XRCC6-208ENST00000478914 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
XRCC6-208ENST00000478914 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
XRCC6-208ENST00000478914 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
XRCC6-208ENST00000478914 NRKQ7Z2Y5 1582 aa12.46□□□□□ -0.42
XRCC6-208ENST00000478914 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
XRCC6-208ENST00000478914 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
XRCC6-208ENST00000478914 KIAA0232Q92628 1395 aa12.45□□□□□ -0.42
XRCC6-208ENST00000478914 ZC3H6P61129 1189 aaKnown RBP12.45□□□□□ -0.42
XRCC6-208ENST00000478914 TRIM26Q12899 539 aaPredicted RBP12.45□□□□□ -0.42
XRCC6-208ENST00000478914 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
XRCC6-208ENST00000478914 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
XRCC6-208ENST00000478914 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
XRCC6-208ENST00000478914 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
XRCC6-208ENST00000478914 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
XRCC6-208ENST00000478914 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
XRCC6-208ENST00000478914 CHRNA2Q15822 529 aa12.43□□□□□ -0.42
XRCC6-208ENST00000478914 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
XRCC6-208ENST00000478914 CABP1Q9NZU7 370 aa12.43□□□□□ -0.42
XRCC6-208ENST00000478914 USP6P35125 1406 aa12.43□□□□□ -0.42
XRCC6-208ENST00000478914 SPATA31A5Q5VU36 1347 aa12.42□□□□□ -0.42
XRCC6-208ENST00000478914 SPATA31A7Q8IWB4 1347 aa12.42□□□□□ -0.42
XRCC6-208ENST00000478914 EVA1CP58658 441 aa12.42□□□□□ -0.42
XRCC6-208ENST00000478914 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
XRCC6-208ENST00000478914 RGPD1P0DJD0 1748 aa12.42□□□□□ -0.42
XRCC6-208ENST00000478914 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
XRCC6-208ENST00000478914 USP19O94966 1318 aa12.41□□□□□ -0.42
XRCC6-208ENST00000478914 ZRANB1Q9UGI0 708 aa12.41□□□□□ -0.42
XRCC6-208ENST00000478914 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
XRCC6-208ENST00000478914 LMO7Q8WWI1 1683 aa12.41□□□□□ -0.42
XRCC6-208ENST00000478914 NLRP6P59044 892 aa12.4□□□□□ -0.42
XRCC6-208ENST00000478914 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
XRCC6-208ENST00000478914 CPDO75976 1380 aa12.4□□□□□ -0.42
XRCC6-208ENST00000478914 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
XRCC6-208ENST00000478914 SRCAPQ6ZRS2 3230 aa12.39□□□□□ -0.43
XRCC6-208ENST00000478914 SPATA31A1Q5TZJ5 1347 aa12.39□□□□□ -0.43
XRCC6-208ENST00000478914 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
XRCC6-208ENST00000478914 GCP02774 474 aa12.39□□□□□ -0.43
XRCC6-208ENST00000478914 SBNO2Q9Y2G9 1366 aa12.39□□□□□ -0.43
XRCC6-208ENST00000478914 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
XRCC6-208ENST00000478914 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
XRCC6-208ENST00000478914 SLIT3O75094 1523 aa12.38□□□□□ -0.43
XRCC6-208ENST00000478914 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
XRCC6-208ENST00000478914 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
XRCC6-208ENST00000478914 BAG6P46379 1132 aa12.37□□□□□ -0.43
XRCC6-208ENST00000478914 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
XRCC6-208ENST00000478914 KTN1Q86UP2 1357 aaKnown RBP12.36□□□□□ -0.43
XRCC6-208ENST00000478914 EP400Q96L91 3159 aa12.36□□□□□ -0.43
XRCC6-208ENST00000478914 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
XRCC6-208ENST00000478914 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
XRCC6-208ENST00000478914 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
XRCC6-208ENST00000478914 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
XRCC6-208ENST00000478914 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
XRCC6-208ENST00000478914 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
XRCC6-208ENST00000478914 COL18A1P39060 1754 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 FAM182BQ5T319 152 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 BARGINQ6ZT62 677 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 TCP11L2Q8N4U5 519 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
XRCC6-208ENST00000478914 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
XRCC6-208ENST00000478914 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
XRCC6-208ENST00000478914 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
XRCC6-208ENST00000478914 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
XRCC6-208ENST00000478914 FAM196AQ6ZSG2 479 aa12.33□□□□□ -0.44
XRCC6-208ENST00000478914 HDGFL2Q7Z4V5 671 aaPredicted RBP12.33□□□□□ -0.44
XRCC6-208ENST00000478914 CRB1P82279 1406 aa12.33□□□□□ -0.44
XRCC6-208ENST00000478914 LTN1O94822 1766 aa12.33□□□□□ -0.44
XRCC6-208ENST00000478914 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
XRCC6-208ENST00000478914 SOX12O15370 315 aa12.32□□□□□ -0.44
XRCC6-208ENST00000478914 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
XRCC6-208ENST00000478914 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
XRCC6-208ENST00000478914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
XRCC6-208ENST00000478914 TERF2IPQ9NYB0 399 aa12.31□□□□□ -0.44
XRCC6-208ENST00000478914 NFAT5O94916 1531 aa12.29□□□□□ -0.44
XRCC6-208ENST00000478914 ABCC6O95255 1503 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms