RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-207ENST00000478913 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-207ENST00000478913 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
CCDC171-207ENST00000478913 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-207ENST00000478913 NR6A1Q15406 480 aa10.05□□□□□ -0.8
CCDC171-207ENST00000478913 MAP10Q9P2G4 905 aa10.05□□□□□ -0.8
CCDC171-207ENST00000478913 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
CCDC171-207ENST00000478913 NDUFB9Q9Y6M9 179 aa10.05□□□□□ -0.8
CCDC171-207ENST00000478913 CYB5RLQ6IPT4 315 aa10.04□□□□□ -0.8
CCDC171-207ENST00000478913 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
CCDC171-207ENST00000478913 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
CCDC171-207ENST00000478913 EVA1BQ9NVM1 165 aa10.04□□□□□ -0.8
CCDC171-207ENST00000478913 RNF223E7ERA6 249 aa10.03□□□□□ -0.8
CCDC171-207ENST00000478913 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-207ENST00000478913 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
CCDC171-207ENST00000478913 CLUAP1Q96AJ1 413 aa10.03□□□□□ -0.8
CCDC171-207ENST00000478913 POM121Q96HA1 1249 aa10.03□□□□□ -0.8
CCDC171-207ENST00000478913 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
CCDC171-207ENST00000478913 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
CCDC171-207ENST00000478913 COG6Q9Y2V7 657 aa10.03□□□□□ -0.8
CCDC171-207ENST00000478913 PNMA1Q8ND90 353 aa10.02□□□□□ -0.81
CCDC171-207ENST00000478913 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
CCDC171-207ENST00000478913 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
CCDC171-207ENST00000478913 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-207ENST00000478913 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
CCDC171-207ENST00000478913 ABL2P42684 1182 aa10□□□□□ -0.81
CCDC171-207ENST00000478913 TRIM67Q6ZTA4 783 aa10□□□□□ -0.81
CCDC171-207ENST00000478913 EIF4G1Q04637 1599 aaKnown RBP10□□□□□ -0.81
CCDC171-207ENST00000478913 A6NJR5 290 aa9.99□□□□□ -0.81
CCDC171-207ENST00000478913 ARMC2Q8NEN0 867 aa9.99□□□□□ -0.81
CCDC171-207ENST00000478913 UNC93B1Q9H1C4 597 aa9.99□□□□□ -0.81
CCDC171-207ENST00000478913 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-207ENST00000478913 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
CCDC171-207ENST00000478913 FKBPLQ9UIM3 349 aa9.98□□□□□ -0.81
CCDC171-207ENST00000478913 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
CCDC171-207ENST00000478913 ZBTB24O43167 697 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-207ENST00000478913 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
CCDC171-207ENST00000478913 PLA2G2CQ5R387 149 aa9.95□□□□□ -0.82
CCDC171-207ENST00000478913 NBPF14Q5TI25 921 aa9.95□□□□□ -0.82
CCDC171-207ENST00000478913 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
CCDC171-207ENST00000478913 UNC13AQ9UPW8 1703 aa9.95□□□□□ -0.82
CCDC171-207ENST00000478913 GPR37L1O60883 481 aa9.94□□□□□ -0.82
CCDC171-207ENST00000478913 GPKOWQ92917 476 aaPredicted RBP eCLIP9.94□□□□□ -0.82
CCDC171-207ENST00000478913 EMID1Q96A84 441 aaPredicted RBP9.94□□□□□ -0.82
CCDC171-207ENST00000478913 MYT1Q01538 1121 aa9.93□□□□□ -0.82
CCDC171-207ENST00000478913 CCDC180Q9P1Z9 1646 aa9.93□□□□□ -0.82
CCDC171-207ENST00000478913 IRF5Q13568 498 aa9.92□□□□□ -0.82
CCDC171-207ENST00000478913 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
CCDC171-207ENST00000478913 RPIAP49247 311 aa9.91□□□□□ -0.82
CCDC171-207ENST00000478913 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
CCDC171-207ENST00000478913 BAP1Q92560 729 aa9.91□□□□□ -0.82
CCDC171-207ENST00000478913 RIMBP3CA6NJZ7 1639 aa9.91□□□□□ -0.82
CCDC171-207ENST00000478913 RIMBP3BA6NNM3 1639 aa9.91□□□□□ -0.82
CCDC171-207ENST00000478913 RIMBP3Q9UFD9 1639 aa9.91□□□□□ -0.82
CCDC171-207ENST00000478913 TRAK2O60296 914 aa9.9□□□□□ -0.82
CCDC171-207ENST00000478913 TRIM32Q13049 653 aa9.9□□□□□ -0.82
CCDC171-207ENST00000478913 WASHC4Q2M389 1173 aa9.9□□□□□ -0.82
CCDC171-207ENST00000478913 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
CCDC171-207ENST00000478913 ZNF330Q9Y3S2 320 aaPredicted RBP9.9□□□□□ -0.82
CCDC171-207ENST00000478913 ZNF511Q8NB15 262 aa9.89□□□□□ -0.83
CCDC171-207ENST00000478913 ZBBXA8MT70 800 aa9.88□□□□□ -0.83
CCDC171-207ENST00000478913 PTK2Q05397 1052 aa9.88□□□□□ -0.83
CCDC171-207ENST00000478913 AGERQ15109 404 aa9.88□□□□□ -0.83
CCDC171-207ENST00000478913 GPSM3Q9Y4H4 160 aa9.88□□□□□ -0.83
CCDC171-207ENST00000478913 NACADO15069 1562 aa9.88□□□□□ -0.83
CCDC171-207ENST00000478913 CD2BP2O95400 341 aaKnown RBP9.87□□□□□ -0.83
CCDC171-207ENST00000478913 SLC19A1P41440 591 aa9.87□□□□□ -0.83
CCDC171-207ENST00000478913 VAC14Q08AM6 782 aa9.87□□□□□ -0.83
CCDC171-207ENST00000478913 NR1H3Q13133 447 aa9.87□□□□□ -0.83
CCDC171-207ENST00000478913 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
CCDC171-207ENST00000478913 LIAT1Q6ZQX7 453 aa9.87□□□□□ -0.83
CCDC171-207ENST00000478913 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-207ENST00000478913 ARHGAP9Q9BRR9 750 aa9.87□□□□□ -0.83
CCDC171-207ENST00000478913 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
CCDC171-207ENST00000478913 SH3BP2P78314 561 aa9.86□□□□□ -0.83
CCDC171-207ENST00000478913 SH3BP5LQ7L8J4 393 aa9.86□□□□□ -0.83
CCDC171-207ENST00000478913 MAGEB6P1A0A0J9YX57 407 aa9.85□□□□□ -0.83
CCDC171-207ENST00000478913 WNT7BP56706 349 aa9.85□□□□□ -0.83
CCDC171-207ENST00000478913 FOXJ1Q92949 421 aa9.85□□□□□ -0.83
CCDC171-207ENST00000478913 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
CCDC171-207ENST00000478913 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
CCDC171-207ENST00000478913 ZBTB33Q86T24 672 aa9.84□□□□□ -0.83
CCDC171-207ENST00000478913 POM121CA8CG34 1229 aa9.83□□□□□ -0.84
CCDC171-207ENST00000478913 SKOR1P84550 965 aa9.83□□□□□ -0.84
CCDC171-207ENST00000478913 SH3RF1Q7Z6J0 888 aa9.83□□□□□ -0.84
CCDC171-207ENST00000478913 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
CCDC171-207ENST00000478913 EIF4G2P78344 907 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC171-207ENST00000478913 ADAM32Q8TC27 787 aa9.82□□□□□ -0.84
CCDC171-207ENST00000478913 OCSTAMPQ9BR26 566 aa9.82□□□□□ -0.84
CCDC171-207ENST00000478913 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
CCDC171-207ENST00000478913 SPRYD7Q5W111 196 aa9.81□□□□□ -0.84
CCDC171-207ENST00000478913 EHBP1Q8NDI1 1231 aa9.81□□□□□ -0.84
CCDC171-207ENST00000478913 SOX11P35716 441 aa9.8□□□□□ -0.84
CCDC171-207ENST00000478913 PKDCCQ504Y2 493 aa9.8□□□□□ -0.84
CCDC171-207ENST00000478913 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
CCDC171-207ENST00000478913 ZNF697Q5TEC3 545 aa9.8□□□□□ -0.84
CCDC171-207ENST00000478913 ZNF592Q92610 1267 aa9.8□□□□□ -0.84
CCDC171-207ENST00000478913 DGAT1O75907 488 aa9.79□□□□□ -0.84
CCDC171-207ENST00000478913 VARSP26640 1264 aaKnown RBP9.79□□□□□ -0.84
CCDC171-207ENST00000478913 SEMA3FQ13275 785 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms