RNA–Protein interactions for RNA: ENST00000478310.1

SLC13A4-205, Transcript of solute carrier family 13 member 4, humanhuman

TSL 2

Gene SLC13A4, Length 1,720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-205ENST00000478310 TTC21BQ7Z4L5 1316 aa23.32■■□□□ 1.32
SLC13A4-205ENST00000478310 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
SLC13A4-205ENST00000478310 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
SLC13A4-205ENST00000478310 NLRP13Q86W25 1043 aa23.3■■□□□ 1.32
SLC13A4-205ENST00000478310 LTBP4Q8N2S1 1624 aa23.29■■□□□ 1.32
SLC13A4-205ENST00000478310 SSH2Q76I76 1423 aa23.29■■□□□ 1.32
SLC13A4-205ENST00000478310 FOXO3O43524 673 aa23.28■■□□□ 1.32
SLC13A4-205ENST00000478310 NRKQ7Z2Y5 1582 aa23.27■■□□□ 1.32
SLC13A4-205ENST00000478310 PSME1Q06323 249 aa23.27■■□□□ 1.32
SLC13A4-205ENST00000478310 KIF20BQ96Q89 1820 aa23.26■■□□□ 1.31
SLC13A4-205ENST00000478310 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
SLC13A4-205ENST00000478310 XPCQ01831 940 aaPredicted RBP23.25■■□□□ 1.31
SLC13A4-205ENST00000478310 YTHDC1Q96MU7 727 aaKnown RBP23.25■■□□□ 1.31
SLC13A4-205ENST00000478310 PAK3O75914 559 aaPredicted RBP23.25■■□□□ 1.31
SLC13A4-205ENST00000478310 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
SLC13A4-205ENST00000478310 TTC21AQ8NDW8 1320 aa23.24■■□□□ 1.31
SLC13A4-205ENST00000478310 FBLN1P23142 703 aa23.22■■□□□ 1.31
SLC13A4-205ENST00000478310 DDX17Q92841 729 aaKnown RBP23.22■■□□□ 1.31
SLC13A4-205ENST00000478310 COG3Q96JB2 828 aa23.22■■□□□ 1.31
SLC13A4-205ENST00000478310 ANKRD26Q9UPS8 1709 aa23.21■■□□□ 1.31
SLC13A4-205ENST00000478310 FAM9BQ8IZU0 186 aa23.21■■□□□ 1.31
SLC13A4-205ENST00000478310 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
SLC13A4-205ENST00000478310 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
SLC13A4-205ENST00000478310 NUTM2GQ5VZR2 741 aa23.19■■□□□ 1.3
SLC13A4-205ENST00000478310 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
SLC13A4-205ENST00000478310 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
SLC13A4-205ENST00000478310 MTHFSP49914 203 aa23.18■■□□□ 1.3
SLC13A4-205ENST00000478310 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
SLC13A4-205ENST00000478310 NLRP6P59044 892 aa23.16■■□□□ 1.3
SLC13A4-205ENST00000478310 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
SLC13A4-205ENST00000478310 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
SLC13A4-205ENST00000478310 PIK3C2AO00443 1686 aa23.15■■□□□ 1.3
SLC13A4-205ENST00000478310 USP31Q70CQ4 1352 aa23.15■■□□□ 1.3
SLC13A4-205ENST00000478310 NPHP3Q7Z494 1330 aa23.14■■□□□ 1.29
SLC13A4-205ENST00000478310 SCAF1Q9H7N4 1312 aaKnown RBP23.14■■□□□ 1.29
SLC13A4-205ENST00000478310 SOX12O15370 315 aa23.13■■□□□ 1.29
SLC13A4-205ENST00000478310 LMOD2Q6P5Q4 547 aa23.12■■□□□ 1.29
SLC13A4-205ENST00000478310 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
SLC13A4-205ENST00000478310 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
SLC13A4-205ENST00000478310 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
SLC13A4-205ENST00000478310 EMILIN1Q9Y6C2 1016 aa23.1■■□□□ 1.29
SLC13A4-205ENST00000478310 TRPM3Q9HCF6 1732 aaPredicted RBP23.09■■□□□ 1.29
SLC13A4-205ENST00000478310 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
SLC13A4-205ENST00000478310 AATKQ6ZMQ8 1374 aa23.09■■□□□ 1.29
SLC13A4-205ENST00000478310 CFAP53Q96M91 514 aa23.08■■□□□ 1.28
SLC13A4-205ENST00000478310 PXDNQ92626 1479 aa23.07■■□□□ 1.28
SLC13A4-205ENST00000478310 MAP2P11137 1827 aaKnown RBP23.06■■□□□ 1.28
SLC13A4-205ENST00000478310 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
SLC13A4-205ENST00000478310 MARF1Q9Y4F3 1742 aaKnown RBP23.05■■□□□ 1.28
SLC13A4-205ENST00000478310 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
SLC13A4-205ENST00000478310 ADAMTS8Q9UP79 889 aa23.05■■□□□ 1.28
SLC13A4-205ENST00000478310 SOS2Q07890 1332 aaPredicted RBP23.03■■□□□ 1.28
SLC13A4-205ENST00000478310 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
SLC13A4-205ENST00000478310 USP54Q70EL1 1684 aa23.02■■□□□ 1.28
SLC13A4-205ENST00000478310 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
SLC13A4-205ENST00000478310 TNS3Q68CZ2 1445 aa23.01■■□□□ 1.27
SLC13A4-205ENST00000478310 ALS2Q96Q42 1657 aa23.01■■□□□ 1.27
SLC13A4-205ENST00000478310 TOM1O60784 492 aa23.01■■□□□ 1.27
SLC13A4-205ENST00000478310 MAP3K19Q56UN5 1328 aa23.01■■□□□ 1.27
SLC13A4-205ENST00000478310 SMG6Q86US8 1419 aaKnown RBP23.01■■□□□ 1.27
SLC13A4-205ENST00000478310 SENP3-EIF4A1A0A087X0R7 540 aa23■■□□□ 1.27
SLC13A4-205ENST00000478310 HNRNPUQ00839 825 aaKnown RBP eCLIP23■■□□□ 1.27
SLC13A4-205ENST00000478310 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
SLC13A4-205ENST00000478310 COL3A1P02461 1466 aaPredicted RBP22.99■■□□□ 1.27
SLC13A4-205ENST00000478310 PIP4K2BP78356 416 aa22.99■■□□□ 1.27
SLC13A4-205ENST00000478310 INSRP06213 1382 aa22.98■■□□□ 1.27
SLC13A4-205ENST00000478310 USP19O94966 1318 aa22.98■■□□□ 1.27
SLC13A4-205ENST00000478310 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
SLC13A4-205ENST00000478310 DIAPH1O60610 1272 aaKnown RBP22.98■■□□□ 1.27
SLC13A4-205ENST00000478310 GCP02774 474 aa22.98■■□□□ 1.27
SLC13A4-205ENST00000478310 CERKQ8TCT0 537 aa22.98■■□□□ 1.27
SLC13A4-205ENST00000478310 KCNH5Q8NCM2 988 aa22.97■■□□□ 1.27
SLC13A4-205ENST00000478310 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
SLC13A4-205ENST00000478310 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
SLC13A4-205ENST00000478310 AMPHP49418 695 aa22.96■■□□□ 1.27
SLC13A4-205ENST00000478310 CABLES1Q8TDN4 633 aa22.96■■□□□ 1.27
SLC13A4-205ENST00000478310 CDK12Q9NYV4 1490 aaPredicted RBP22.96■■□□□ 1.27
SLC13A4-205ENST00000478310 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
SLC13A4-205ENST00000478310 PEAK1Q9H792 1746 aa22.96■■□□□ 1.27
SLC13A4-205ENST00000478310 ZBTB7CA1YPR0 619 aa22.95■■□□□ 1.26
SLC13A4-205ENST00000478310 U2SURPO15042 1029 aaKnown RBP22.95■■□□□ 1.26
SLC13A4-205ENST00000478310 NUDCQ9Y266 331 aa22.95■■□□□ 1.26
SLC13A4-205ENST00000478310 MED1Q15648 1581 aaPredicted RBP22.95■■□□□ 1.26
SLC13A4-205ENST00000478310 ARHGEF10O15013 1369 aa22.95■■□□□ 1.26
SLC13A4-205ENST00000478310 SLIT3O75094 1523 aa22.94■■□□□ 1.26
SLC13A4-205ENST00000478310 NFAT5O94916 1531 aa22.94■■□□□ 1.26
SLC13A4-205ENST00000478310 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
SLC13A4-205ENST00000478310 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
SLC13A4-205ENST00000478310 IL13P35225 146 aa22.93■■□□□ 1.26
SLC13A4-205ENST00000478310 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
SLC13A4-205ENST00000478310 FLT4P35916 1363 aa22.91■■□□□ 1.26
SLC13A4-205ENST00000478310 IQSEC2Q5JU85 1478 aa22.91■■□□□ 1.26
SLC13A4-205ENST00000478310 BLMP54132 1417 aaPredicted RBP22.91■■□□□ 1.26
SLC13A4-205ENST00000478310 HOXC9P31274 260 aa22.91■■□□□ 1.26
SLC13A4-205ENST00000478310 ZC3H6P61129 1189 aaKnown RBP22.91■■□□□ 1.26
SLC13A4-205ENST00000478310 EIF4A2Q14240 407 aaKnown RBP22.91■■□□□ 1.26
SLC13A4-205ENST00000478310 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
SLC13A4-205ENST00000478310 AHDC1Q5TGY3 1603 aaPredicted RBP22.9■■□□□ 1.26
SLC13A4-205ENST00000478310 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
SLC13A4-205ENST00000478310 IP6K1Q92551 441 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms