RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 E9PCH4 1651 aa10□□□□□ -0.81
SYCP3-204ENST00000478139 HSPA1LP34931 641 aa10□□□□□ -0.81
SYCP3-204ENST00000478139 SPHKAPQ2M3C7 1700 aa10□□□□□ -0.81
SYCP3-204ENST00000478139 PLEKHH1Q9ULM0 1364 aa10□□□□□ -0.81
SYCP3-204ENST00000478139 BRINP3Q76B58 766 aa10□□□□□ -0.81
SYCP3-204ENST00000478139 U2AF1L5P0DN76 240 aaPredicted RBP9.99□□□□□ -0.81
SYCP3-204ENST00000478139 U2AF1Q01081 240 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYCP3-204ENST00000478139 CLTCL1P53675 1640 aa9.99□□□□□ -0.81
SYCP3-204ENST00000478139 CHRNA2Q15822 529 aa9.99□□□□□ -0.81
SYCP3-204ENST00000478139 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
SYCP3-204ENST00000478139 MROH2AA6NES4 1674 aa9.98□□□□□ -0.81
SYCP3-204ENST00000478139 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
SYCP3-204ENST00000478139 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
SYCP3-204ENST00000478139 PPIP5K1Q6PFW1 1433 aa9.98□□□□□ -0.81
SYCP3-204ENST00000478139 NME9Q86XW9 330 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 MYOM2P54296 1465 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 NEUROD2Q15784 382 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 VWDEQ8N2E2 1590 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 ADGRL3Q9HAR2 1447 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 ARHGEF10O15013 1369 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 DISP3Q9P2K9 1392 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 MYO3AQ8NEV4 1616 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 TTC21AQ8NDW8 1320 aa9.97□□□□□ -0.81
SYCP3-204ENST00000478139 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.81
SYCP3-204ENST00000478139 SYNMO15061 1565 aa9.96□□□□□ -0.81
SYCP3-204ENST00000478139 ADAMTS13Q76LX8 1427 aa9.96□□□□□ -0.81
SYCP3-204ENST00000478139 DEPDC5O75140 1603 aa9.96□□□□□ -0.82
SYCP3-204ENST00000478139 MROH1Q8NDA8 1641 aa9.96□□□□□ -0.82
SYCP3-204ENST00000478139 FAM135BQ49AJ0 1406 aa9.96□□□□□ -0.82
SYCP3-204ENST00000478139 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
SYCP3-204ENST00000478139 PNISRQ8TF01 805 aaKnown RBP9.95□□□□□ -0.82
SYCP3-204ENST00000478139 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
SYCP3-204ENST00000478139 USP21Q9UK80 565 aa9.95□□□□□ -0.82
SYCP3-204ENST00000478139 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
SYCP3-204ENST00000478139 RALBP1Q15311 655 aa9.95□□□□□ -0.82
SYCP3-204ENST00000478139 CPS1P31327 1500 aa9.95□□□□□ -0.82
SYCP3-204ENST00000478139 RALGAPBQ86X10 1494 aa9.94□□□□□ -0.82
SYCP3-204ENST00000478139 ARHGAP23Q9P227 1491 aa9.94□□□□□ -0.82
SYCP3-204ENST00000478139 NINLQ9Y2I6 1382 aa9.94□□□□□ -0.82
SYCP3-204ENST00000478139 TATP17735 454 aaPredicted RBP9.94□□□□□ -0.82
SYCP3-204ENST00000478139 ZNF772Q68DY9 489 aaPredicted RBP9.94□□□□□ -0.82
SYCP3-204ENST00000478139 SLIT1O75093 1534 aa9.94□□□□□ -0.82
SYCP3-204ENST00000478139 PUS7Q96PZ0 661 aaKnown RBP9.94□□□□□ -0.82
SYCP3-204ENST00000478139 PLEKHG3A1L390 1219 aa9.94□□□□□ -0.82
SYCP3-204ENST00000478139 GCP02774 474 aa9.94□□□□□ -0.82
SYCP3-204ENST00000478139 JCADQ9P266 1359 aa9.93□□□□□ -0.82
SYCP3-204ENST00000478139 ALKQ9UM73 1620 aa9.93□□□□□ -0.82
SYCP3-204ENST00000478139 DIAPH1O60610 1272 aaKnown RBP9.93□□□□□ -0.82
SYCP3-204ENST00000478139 NKTRP30414 1462 aaKnown RBP9.93□□□□□ -0.82
SYCP3-204ENST00000478139 RRS1Q15050 365 aaKnown RBP9.93□□□□□ -0.82
SYCP3-204ENST00000478139 BTG4Q9NY30 223 aa9.93□□□□□ -0.82
SYCP3-204ENST00000478139 DDX54Q8TDD1 881 aaKnown RBP9.93□□□□□ -0.82
SYCP3-204ENST00000478139 IPO9Q96P70 1041 aaKnown RBP9.92□□□□□ -0.82
SYCP3-204ENST00000478139 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
SYCP3-204ENST00000478139 NPHP1O15259 732 aa9.92□□□□□ -0.82
SYCP3-204ENST00000478139 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
SYCP3-204ENST00000478139 NSD3Q9BZ95 1437 aa9.91□□□□□ -0.82
SYCP3-204ENST00000478139 QTRT2Q9H974 415 aaKnown RBP9.91□□□□□ -0.82
SYCP3-204ENST00000478139 TRPC5Q9UL62 973 aaPredicted RBP9.91□□□□□ -0.82
SYCP3-204ENST00000478139 NCOA3Q9Y6Q9 1424 aa9.91□□□□□ -0.82
SYCP3-204ENST00000478139 EXOC5O00471 708 aa9.91□□□□□ -0.82
SYCP3-204ENST00000478139 EXOC6Q8TAG9 804 aa9.91□□□□□ -0.82
SYCP3-204ENST00000478139 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
SYCP3-204ENST00000478139 MTHFSP49914 203 aa9.9□□□□□ -0.82
SYCP3-204ENST00000478139 RXRBP28702 533 aa9.9□□□□□ -0.82
SYCP3-204ENST00000478139 PTCH1Q13635 1447 aa9.9□□□□□ -0.83
SYCP3-204ENST00000478139 TEFQ10587 303 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 TMEM131LA2VDJ0 1609 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 TESK2Q96S53 571 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 MED14O60244 1454 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 SPATA31A6Q5VVP1 1343 aa9.89□□□□□ -0.83
SYCP3-204ENST00000478139 C1orf167Q5SNV9 1468 aa9.88□□□□□ -0.83
SYCP3-204ENST00000478139 RRP1P56182 461 aaKnown RBP9.88□□□□□ -0.83
SYCP3-204ENST00000478139 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
SYCP3-204ENST00000478139 CANXP27824 592 aaKnown RBP9.88□□□□□ -0.83
SYCP3-204ENST00000478139 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
SYCP3-204ENST00000478139 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
SYCP3-204ENST00000478139 PTPRUQ92729 1446 aa9.88□□□□□ -0.83
SYCP3-204ENST00000478139 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
SYCP3-204ENST00000478139 SPG7Q9UQ90 795 aa9.88□□□□□ -0.83
SYCP3-204ENST00000478139 ANKRD36BQ8N2N9 1353 aa9.88□□□□□ -0.83
SYCP3-204ENST00000478139 SPATA31A3Q5VYP0 1347 aa9.88□□□□□ -0.83
SYCP3-204ENST00000478139 RTL5Q5HYW3 569 aaPredicted RBP9.87□□□□□ -0.83
SYCP3-204ENST00000478139 DIP2AQ14689 1571 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 PRR36Q9H6K5 1346 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 HMOX1P09601 288 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 ANKARQ7Z5J8 1434 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 ZRANB1Q9UGI0 708 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 RCAN3Q9UKA8 241 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 AFF2P51816 1311 aa9.87□□□□□ -0.83
SYCP3-204ENST00000478139 DDB1Q16531 1140 aa9.86□□□□□ -0.83
SYCP3-204ENST00000478139 UBR1Q8IWV7 1749 aa9.86□□□□□ -0.83
SYCP3-204ENST00000478139 BRD4O60885 1362 aaPredicted RBP9.86□□□□□ -0.83
SYCP3-204ENST00000478139 FYB1O15117 783 aa9.86□□□□□ -0.83
SYCP3-204ENST00000478139 LRRC7Q96NW7 1537 aa9.86□□□□□ -0.83
SYCP3-204ENST00000478139 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms