RNA–Protein interactions for RNA: ENST00000477909.5

NXPE3-203, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-203ENST00000477909 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
NXPE3-203ENST00000477909 KDM2BQ8NHM5 1336 aa9.51□□□□□ -0.89
NXPE3-203ENST00000477909 YTHDC2Q9H6S0 1430 aaKnown RBP9.51□□□□□ -0.89
NXPE3-203ENST00000477909 GGNBP2Q9H3C7 697 aa9.51□□□□□ -0.89
NXPE3-203ENST00000477909 MLECQ14165 292 aa9.5□□□□□ -0.89
NXPE3-203ENST00000477909 PRAM1Q96QH2 718 aa9.5□□□□□ -0.89
NXPE3-203ENST00000477909 ATP7BP35670 1465 aa9.5□□□□□ -0.89
NXPE3-203ENST00000477909 FAM135BQ49AJ0 1406 aa9.5□□□□□ -0.89
NXPE3-203ENST00000477909 RUNDC1Q96C34 613 aa9.5□□□□□ -0.89
NXPE3-203ENST00000477909 U2AF1L5P0DN76 240 aaPredicted RBP9.49□□□□□ -0.89
NXPE3-203ENST00000477909 MS4A1P11836 297 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 RGS3P49796 1198 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 U2AF1Q01081 240 aaKnown RBP eCLIP9.49□□□□□ -0.89
NXPE3-203ENST00000477909 PANK1Q8TE04 598 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 POGKQ9P215 609 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 STAG3Q9UJ98 1225 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 TNNQ9UQP3 1299 aa9.49□□□□□ -0.89
NXPE3-203ENST00000477909 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.49□□□□□ -0.89
NXPE3-203ENST00000477909 MARF1Q9Y4F3 1742 aaKnown RBP9.49□□□□□ -0.89
NXPE3-203ENST00000477909 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
NXPE3-203ENST00000477909 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
NXPE3-203ENST00000477909 CENPQQ7L2Z9 268 aaPredicted RBP9.48□□□□□ -0.89
NXPE3-203ENST00000477909 COG6Q9Y2V7 657 aa9.48□□□□□ -0.89
NXPE3-203ENST00000477909 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
NXPE3-203ENST00000477909 CFAP53Q96M91 514 aa9.48□□□□□ -0.89
NXPE3-203ENST00000477909 A0A1W2PP64 1363 aa9.48□□□□□ -0.89
NXPE3-203ENST00000477909 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
NXPE3-203ENST00000477909 U2SURPO15042 1029 aaKnown RBP9.47□□□□□ -0.89
NXPE3-203ENST00000477909 IGHDP01880 384 aa9.47□□□□□ -0.89
NXPE3-203ENST00000477909 FBLN1P23142 703 aa9.47□□□□□ -0.89
NXPE3-203ENST00000477909 GLIPR1L2Q4G1C9 344 aa9.47□□□□□ -0.89
NXPE3-203ENST00000477909 ABCC11Q96J66 1382 aa9.47□□□□□ -0.89
NXPE3-203ENST00000477909 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
NXPE3-203ENST00000477909 FAM43AQ8N2R8 423 aa9.46□□□□□ -0.89
NXPE3-203ENST00000477909 WAPLQ7Z5K2 1190 aa9.46□□□□□ -0.9
NXPE3-203ENST00000477909 RGPD1P0DJD0 1748 aa9.46□□□□□ -0.9
NXPE3-203ENST00000477909 CHD2O14647 1828 aaKnown RBP9.46□□□□□ -0.9
NXPE3-203ENST00000477909 DDRGK1Q96HY6 314 aa9.46□□□□□ -0.9
NXPE3-203ENST00000477909 FMN2Q9NZ56 1722 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 FYB1O15117 783 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 RARSP54136 660 aaKnown RBP9.45□□□□□ -0.9
NXPE3-203ENST00000477909 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 CABP1Q9NZU7 370 aa9.45□□□□□ -0.9
NXPE3-203ENST00000477909 TSR2Q969E8 191 aaKnown RBP9.44□□□□□ -0.9
NXPE3-203ENST00000477909 RLBP1P12271 317 aa9.44□□□□□ -0.9
NXPE3-203ENST00000477909 VSIG10Q8N0Z9 540 aa9.44□□□□□ -0.9
NXPE3-203ENST00000477909 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
NXPE3-203ENST00000477909 ADAMTS13Q76LX8 1427 aa9.44□□□□□ -0.9
NXPE3-203ENST00000477909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.9
NXPE3-203ENST00000477909 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
NXPE3-203ENST00000477909 PHF23Q9BUL5 403 aaPredicted RBP9.44□□□□□ -0.9
NXPE3-203ENST00000477909 MAP2P11137 1827 aaKnown RBP9.43□□□□□ -0.9
NXPE3-203ENST00000477909 CPSF1Q10570 1443 aaKnown RBP9.43□□□□□ -0.9
NXPE3-203ENST00000477909 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
NXPE3-203ENST00000477909 VIRMAQ69YN4 1812 aaKnown RBP9.43□□□□□ -0.9
NXPE3-203ENST00000477909 C8orf34Q49A92 452 aa9.43□□□□□ -0.9
NXPE3-203ENST00000477909 WDR63Q8IWG1 891 aa9.43□□□□□ -0.9
NXPE3-203ENST00000477909 PLEKHG1Q9ULL1 1385 aa9.42□□□□□ -0.9
NXPE3-203ENST00000477909 TERF2IPQ9NYB0 399 aa9.42□□□□□ -0.9
NXPE3-203ENST00000477909 PTCH1Q13635 1447 aa9.42□□□□□ -0.9
NXPE3-203ENST00000477909 CEP170BQ9Y4F5 1589 aaPredicted RBP9.42□□□□□ -0.9
NXPE3-203ENST00000477909 PDE3AQ14432 1141 aa9.42□□□□□ -0.9
NXPE3-203ENST00000477909 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
NXPE3-203ENST00000477909 TNRQ92752 1358 aa9.41□□□□□ -0.9
NXPE3-203ENST00000477909 PHRF1Q9P1Y6 1649 aaKnown RBP9.41□□□□□ -0.9
NXPE3-203ENST00000477909 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
NXPE3-203ENST00000477909 PLEKHF1Q96S99 279 aa9.41□□□□□ -0.9
NXPE3-203ENST00000477909 NWD1Q149M9 1564 aa9.41□□□□□ -0.9
NXPE3-203ENST00000477909 HDGFL2Q7Z4V5 671 aaPredicted RBP9.4□□□□□ -0.9
NXPE3-203ENST00000477909 TMEM2Q9UHN6 1383 aa9.4□□□□□ -0.9
NXPE3-203ENST00000477909 PNPLA6Q8IY17 1366 aa9.4□□□□□ -0.9
NXPE3-203ENST00000477909 TMPOP42166 694 aaKnown RBP9.4□□□□□ -0.9
NXPE3-203ENST00000477909 TRIM35Q9UPQ4 493 aa9.4□□□□□ -0.9
NXPE3-203ENST00000477909 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
NXPE3-203ENST00000477909 NCKAP5LQ9HCH0 1330 aa9.4□□□□□ -0.9
NXPE3-203ENST00000477909 EXOSC9Q06265 439 aaKnown RBP9.4□□□□□ -0.91
NXPE3-203ENST00000477909 CCDC27Q2M243 656 aa9.4□□□□□ -0.91
NXPE3-203ENST00000477909 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
NXPE3-203ENST00000477909 FRAT2O75474 233 aaPredicted RBP9.39□□□□□ -0.91
NXPE3-203ENST00000477909 MYH16Q9H6N6 1097 aa9.39□□□□□ -0.91
NXPE3-203ENST00000477909 DLG5Q8TDM6 1919 aa9.39□□□□□ -0.91
NXPE3-203ENST00000477909 RIPK4P57078 832 aa9.39□□□□□ -0.91
NXPE3-203ENST00000477909 TXNDC2Q86VQ3 553 aa9.39□□□□□ -0.91
NXPE3-203ENST00000477909 MAPK8IP3Q9UPT6 1336 aa9.38□□□□□ -0.91
NXPE3-203ENST00000477909 RGPD8O14715 1765 aaPredicted RBP9.38□□□□□ -0.91
NXPE3-203ENST00000477909 DIAPH1O60610 1272 aaKnown RBP9.38□□□□□ -0.91
NXPE3-203ENST00000477909 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
NXPE3-203ENST00000477909 HMOX1P09601 288 aa9.37□□□□□ -0.91
NXPE3-203ENST00000477909 SEC24BO95487 1268 aa9.37□□□□□ -0.91
NXPE3-203ENST00000477909 RRAGDQ9NQL2 400 aaPredicted RBP9.36□□□□□ -0.91
NXPE3-203ENST00000477909 SMC4Q9NTJ3 1288 aa9.36□□□□□ -0.91
NXPE3-203ENST00000477909 POLKQ9UBT6 870 aa9.36□□□□□ -0.91
NXPE3-203ENST00000477909 METP08581 1390 aa9.36□□□□□ -0.91
NXPE3-203ENST00000477909 NME9Q86XW9 330 aa9.36□□□□□ -0.91
NXPE3-203ENST00000477909 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms