RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 FAM98CQ17RN3 349 aaKnown RBP27.23■■□□□ 1.95
PRKCD-204ENST00000477794 PRR36Q9H6K5 1346 aa27.2■■□□□ 1.95
PRKCD-204ENST00000477794 COL14A1Q05707 1796 aaKnown RBP27.2■■□□□ 1.95
PRKCD-204ENST00000477794 PRDM11Q9NQV5 511 aa27.2■■□□□ 1.94
PRKCD-204ENST00000477794 TRPM3Q9HCF6 1732 aaPredicted RBP27.19■■□□□ 1.94
PRKCD-204ENST00000477794 HRCP23327 699 aa27.17■■□□□ 1.94
PRKCD-204ENST00000477794 ALS2Q96Q42 1657 aa27.17■■□□□ 1.94
PRKCD-204ENST00000477794 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
PRKCD-204ENST00000477794 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
PRKCD-204ENST00000477794 NUDT16Q96DE0 195 aaKnown RBP27.14■■□□□ 1.94
PRKCD-204ENST00000477794 NRAPQ86VF7 1730 aa27.13■■□□□ 1.93
PRKCD-204ENST00000477794 ITSN1Q15811 1721 aa27.11■■□□□ 1.93
PRKCD-204ENST00000477794 ATP7BP35670 1465 aa27.11■■□□□ 1.93
PRKCD-204ENST00000477794 CDK19Q9BWU1 502 aa27.07■■□□□ 1.92
PRKCD-204ENST00000477794 CCDC61Q9Y6R9 512 aa27.07■■□□□ 1.92
PRKCD-204ENST00000477794 KIAA0232Q92628 1395 aa27.07■■□□□ 1.92
PRKCD-204ENST00000477794 SPATA31A1Q5TZJ5 1347 aa27.05■■□□□ 1.92
PRKCD-204ENST00000477794 LRP5O75197 1615 aa27.05■■□□□ 1.92
PRKCD-204ENST00000477794 ARHGEF28Q8N1W1 1705 aaKnown RBP27.04■■□□□ 1.92
PRKCD-204ENST00000477794 EVA1CP58658 441 aa27.04■■□□□ 1.92
PRKCD-204ENST00000477794 FAM196AQ6ZSG2 479 aa27.04■■□□□ 1.92
PRKCD-204ENST00000477794 STRN4Q9NRL3 753 aa27.04■■□□□ 1.92
PRKCD-204ENST00000477794 RGPD1P0DJD0 1748 aa27.04■■□□□ 1.92
PRKCD-204ENST00000477794 PSDA5PKW4 1024 aaPredicted RBP27.03■■□□□ 1.92
PRKCD-204ENST00000477794 EN1Q05925 392 aaPredicted RBP27.03■■□□□ 1.92
PRKCD-204ENST00000477794 DISP2A7MBM2 1401 aa27.02■■□□□ 1.92
PRKCD-204ENST00000477794 POLR3AO14802 1390 aaPredicted RBP27.02■■□□□ 1.92
PRKCD-204ENST00000477794 ZC3H6P61129 1189 aaKnown RBP27.02■■□□□ 1.92
PRKCD-204ENST00000477794 CHRNA2Q15822 529 aa27.02■■□□□ 1.92
PRKCD-204ENST00000477794 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
PRKCD-204ENST00000477794 ACEP12821 1306 aa27.01■■□□□ 1.91
PRKCD-204ENST00000477794 NBPF8Q3BBV2 869 aa27.01■■□□□ 1.91
PRKCD-204ENST00000477794 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.91
PRKCD-204ENST00000477794 PLEKHG3A1L390 1219 aa27■■□□□ 1.91
PRKCD-204ENST00000477794 FAM182BQ5T319 152 aa27■■□□□ 1.91
PRKCD-204ENST00000477794 NUTM2GQ5VZR2 741 aa26.99■■□□□ 1.91
PRKCD-204ENST00000477794 ABTB2Q8N961 1025 aa26.99■■□□□ 1.91
PRKCD-204ENST00000477794 PDE3BQ13370 1112 aa26.98■■□□□ 1.91
PRKCD-204ENST00000477794 PARD3Q8TEW0 1356 aa26.97■■□□□ 1.91
PRKCD-204ENST00000477794 SRPK2P78362 688 aaKnown RBP26.96■■□□□ 1.91
PRKCD-204ENST00000477794 BARGINQ6ZT62 677 aa26.96■■□□□ 1.91
PRKCD-204ENST00000477794 USP35Q9P2H5 1018 aa26.96■■□□□ 1.91
PRKCD-204ENST00000477794 PHRF1Q9P1Y6 1649 aaKnown RBP26.95■■□□□ 1.91
PRKCD-204ENST00000477794 NLRP13Q86W25 1043 aa26.95■■□□□ 1.9
PRKCD-204ENST00000477794 KIAA1210Q9ULL0 1709 aa26.95■■□□□ 1.9
PRKCD-204ENST00000477794 SSH2Q76I76 1423 aa26.94■■□□□ 1.9
PRKCD-204ENST00000477794 TRIM37O94972 964 aa26.94■■□□□ 1.9
PRKCD-204ENST00000477794 R3HDM1Q15032 1099 aaKnown RBP26.94■■□□□ 1.9
PRKCD-204ENST00000477794 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
PRKCD-204ENST00000477794 CPDO75976 1380 aa26.94■■□□□ 1.9
PRKCD-204ENST00000477794 C11orf95C9JLR9 678 aaPredicted RBP26.92■■□□□ 1.9
PRKCD-204ENST00000477794 TCP11L2Q8N4U5 519 aa26.92■■□□□ 1.9
PRKCD-204ENST00000477794 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
PRKCD-204ENST00000477794 CENPJQ9HC77 1338 aaPredicted RBP26.91■■□□□ 1.9
PRKCD-204ENST00000477794 APBA3O96018 575 aa26.91■■□□□ 1.9
PRKCD-204ENST00000477794 THRAP3Q9Y2W1 955 aaKnown RBP26.91■■□□□ 1.9
PRKCD-204ENST00000477794 EZH2Q15910 746 aaKnown RBP26.9■■□□□ 1.9
PRKCD-204ENST00000477794 USP19O94966 1318 aa26.9■■□□□ 1.9
PRKCD-204ENST00000477794 PPIP5K1Q6PFW1 1433 aa26.89■■□□□ 1.89
PRKCD-204ENST00000477794 CAMKK2Q96RR4 588 aa26.88■■□□□ 1.89
PRKCD-204ENST00000477794 TNS1Q9HBL0 1735 aaKnown RBP26.87■■□□□ 1.89
PRKCD-204ENST00000477794 GCP02774 474 aa26.87■■□□□ 1.89
PRKCD-204ENST00000477794 LARP1Q6PKG0 1096 aaKnown RBP26.87■■□□□ 1.89
PRKCD-204ENST00000477794 NRKQ7Z2Y5 1582 aa26.87■■□□□ 1.89
PRKCD-204ENST00000477794 NBPF1Q3BBV0 1214 aa26.86■■□□□ 1.89
PRKCD-204ENST00000477794 NBPF14Q5TI25 921 aa26.86■■□□□ 1.89
PRKCD-204ENST00000477794 CAMTA1Q9Y6Y1 1673 aa26.84■■□□□ 1.89
PRKCD-204ENST00000477794 CABP2Q9NPB3 220 aa26.83■■□□□ 1.89
PRKCD-204ENST00000477794 NLRP6P59044 892 aa26.8■■□□□ 1.88
PRKCD-204ENST00000477794 CRB1P82279 1406 aa26.79■■□□□ 1.88
PRKCD-204ENST00000477794 LMO7Q8WWI1 1683 aa26.79■■□□□ 1.88
PRKCD-204ENST00000477794 ZBTB7CA1YPR0 619 aa26.78■■□□□ 1.88
PRKCD-204ENST00000477794 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
PRKCD-204ENST00000477794 COL5A2P05997 1499 aaPredicted RBP26.78■■□□□ 1.88
PRKCD-204ENST00000477794 USP6P35125 1406 aa26.77■■□□□ 1.88
PRKCD-204ENST00000477794 AATKQ6ZMQ8 1374 aa26.77■■□□□ 1.88
PRKCD-204ENST00000477794 EVC2Q86UK5 1308 aa26.77■■□□□ 1.88
PRKCD-204ENST00000477794 OVOS2A0A0G2JMS6 1433 aa26.73■■□□□ 1.87
PRKCD-204ENST00000477794 OVOS2A0A0J9YW53 1432 aa26.73■■□□□ 1.87
PRKCD-204ENST00000477794 OVOS2Q6IE36 1432 aa26.73■■□□□ 1.87
PRKCD-204ENST00000477794 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
PRKCD-204ENST00000477794 TOM1L2Q6ZVM7 507 aa26.72■■□□□ 1.87
PRKCD-204ENST00000477794 ZNF692Q9BU19 519 aaPredicted RBP26.72■■□□□ 1.87
PRKCD-204ENST00000477794 CDCA7Q9BWT1 371 aaPredicted RBP26.72■■□□□ 1.87
PRKCD-204ENST00000477794 DDB1Q16531 1140 aa26.71■■□□□ 1.87
PRKCD-204ENST00000477794 PARP4Q9UKK3 1724 aaKnown RBP26.7■■□□□ 1.87
PRKCD-204ENST00000477794 KCNH5Q8NCM2 988 aa26.7■■□□□ 1.86
PRKCD-204ENST00000477794 PPP1R1BQ9UD71 204 aaPredicted RBP26.69■■□□□ 1.86
PRKCD-204ENST00000477794 L3MBTL2Q969R5 705 aa26.68■■□□□ 1.86
PRKCD-204ENST00000477794 SPON1Q9HCB6 807 aa26.68■■□□□ 1.86
PRKCD-204ENST00000477794 RREB1Q92766 1687 aa26.68■■□□□ 1.86
PRKCD-204ENST00000477794 SLIT3O75094 1523 aa26.68■■□□□ 1.86
PRKCD-204ENST00000477794 DCAF8L1A6NGE4 600 aa26.67■■□□□ 1.86
PRKCD-204ENST00000477794 WDR17Q8IZU2 1322 aa26.66■■□□□ 1.86
PRKCD-204ENST00000477794 ROCK2O75116 1388 aaKnown RBP26.65■■□□□ 1.86
PRKCD-204ENST00000477794 TTC21AQ8NDW8 1320 aa26.65■■□□□ 1.86
PRKCD-204ENST00000477794 PLSCR1O15162 318 aa26.64■■□□□ 1.86
PRKCD-204ENST00000477794 CSB-PGBD3P0DP91 1061 aa26.64■■□□□ 1.86
PRKCD-204ENST00000477794 NUP188Q5SRE5 1749 aa26.64■■□□□ 1.85
PRKCD-204ENST00000477794 CPSF1Q10570 1443 aaKnown RBP26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms