RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 EVC2Q86UK5 1308 aa25.1■■□□□ 1.61
PTPN7-209ENST00000477554 RXRBP28702 533 aa25.08■■□□□ 1.61
PTPN7-209ENST00000477554 PLCH1Q4KWH8 1693 aa25.08■■□□□ 1.6
PTPN7-209ENST00000477554 SLIT2O94813 1529 aa25.07■■□□□ 1.6
PTPN7-209ENST00000477554 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
PTPN7-209ENST00000477554 ATRNO75882 1429 aa25.07■■□□□ 1.6
PTPN7-209ENST00000477554 RGS12O14924 1447 aa25.06■■□□□ 1.6
PTPN7-209ENST00000477554 PHRF1Q9P1Y6 1649 aaKnown RBP25.06■■□□□ 1.6
PTPN7-209ENST00000477554 FAM83GA6ND36 823 aa25.05■■□□□ 1.6
PTPN7-209ENST00000477554 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
PTPN7-209ENST00000477554 ST20-MTHFSA0A0A6YYL1 179 aa25.04■■□□□ 1.6
PTPN7-209ENST00000477554 TESK2Q96S53 571 aa25.04■■□□□ 1.6
PTPN7-209ENST00000477554 SBNO2Q9Y2G9 1366 aa25.04■■□□□ 1.6
PTPN7-209ENST00000477554 CLSPNQ9HAW4 1339 aa25.03■■□□□ 1.6
PTPN7-209ENST00000477554 USP6P35125 1406 aa25.02■■□□□ 1.6
PTPN7-209ENST00000477554 AKAP12Q02952 1782 aa25.01■■□□□ 1.59
PTPN7-209ENST00000477554 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.01■■□□□ 1.59
PTPN7-209ENST00000477554 RBM6P78332 1123 aaKnown RBP25.01■■□□□ 1.59
PTPN7-209ENST00000477554 SSH2Q76I76 1423 aa25■■□□□ 1.59
PTPN7-209ENST00000477554 TRPC5Q9UL62 973 aaPredicted RBP25■■□□□ 1.59
PTPN7-209ENST00000477554 GLI3P10071 1580 aa25■■□□□ 1.59
PTPN7-209ENST00000477554 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
PTPN7-209ENST00000477554 CD163L1Q9NR16 1453 aa24.99■■□□□ 1.59
PTPN7-209ENST00000477554 PIK3C2AO00443 1686 aa24.99■■□□□ 1.59
PTPN7-209ENST00000477554 NRKQ7Z2Y5 1582 aa24.98■■□□□ 1.59
PTPN7-209ENST00000477554 UNC5CLQ8IV45 518 aa24.98■■□□□ 1.59
PTPN7-209ENST00000477554 ABTB2Q8N961 1025 aa24.98■■□□□ 1.59
PTPN7-209ENST00000477554 USP47Q96K76 1375 aa24.97■■□□□ 1.59
PTPN7-209ENST00000477554 CDK12Q9NYV4 1490 aaPredicted RBP24.97■■□□□ 1.59
PTPN7-209ENST00000477554 NWD2Q9ULI1 1742 aa24.97■■□□□ 1.59
PTPN7-209ENST00000477554 CHRNA2Q15822 529 aa24.96■■□□□ 1.59
PTPN7-209ENST00000477554 KIAA0232Q92628 1395 aa24.96■■□□□ 1.59
PTPN7-209ENST00000477554 ZC3H6P61129 1189 aaKnown RBP24.95■■□□□ 1.59
PTPN7-209ENST00000477554 SLC12A5Q9H2X9 1139 aa24.95■■□□□ 1.59
PTPN7-209ENST00000477554 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.59
PTPN7-209ENST00000477554 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
PTPN7-209ENST00000477554 ATAD2Q6PL18 1390 aa24.95■■□□□ 1.58
PTPN7-209ENST00000477554 GJD4Q96KN9 370 aaPredicted RBP24.94■■□□□ 1.58
PTPN7-209ENST00000477554 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
PTPN7-209ENST00000477554 USP19O94966 1318 aa24.93■■□□□ 1.58
PTPN7-209ENST00000477554 MON2Q7Z3U7 1717 aa24.93■■□□□ 1.58
PTPN7-209ENST00000477554 ZRANB1Q9UGI0 708 aa24.92■■□□□ 1.58
PTPN7-209ENST00000477554 TMC1Q8TDI8 760 aa24.91■■□□□ 1.58
PTPN7-209ENST00000477554 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
PTPN7-209ENST00000477554 TTC21BQ7Z4L5 1316 aa24.91■■□□□ 1.58
PTPN7-209ENST00000477554 EP400Q96L91 3159 aa24.9■■□□□ 1.58
PTPN7-209ENST00000477554 PRDM11Q9NQV5 511 aa24.9■■□□□ 1.58
PTPN7-209ENST00000477554 KTN1Q86UP2 1357 aaKnown RBP24.89■■□□□ 1.58
PTPN7-209ENST00000477554 NLRP6P59044 892 aa24.87■■□□□ 1.57
PTPN7-209ENST00000477554 VPS72Q15906 364 aa24.87■■□□□ 1.57
PTPN7-209ENST00000477554 BRWD3Q6RI45 1802 aa24.87■■□□□ 1.57
PTPN7-209ENST00000477554 SLIT3O75094 1523 aa24.87■■□□□ 1.57
PTPN7-209ENST00000477554 GCP02774 474 aa24.86■■□□□ 1.57
PTPN7-209ENST00000477554 A0A1W2PP64 1363 aa24.86■■□□□ 1.57
PTPN7-209ENST00000477554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.86■■□□□ 1.57
PTPN7-209ENST00000477554 LMO7Q8WWI1 1683 aa24.85■■□□□ 1.57
PTPN7-209ENST00000477554 CAMTA1Q9Y6Y1 1673 aa24.85■■□□□ 1.57
PTPN7-209ENST00000477554 NLRP13Q86W25 1043 aa24.85■■□□□ 1.57
PTPN7-209ENST00000477554 UPF1Q92900 1129 aaKnown RBP eCLIP24.85■■□□□ 1.57
PTPN7-209ENST00000477554 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
PTPN7-209ENST00000477554 BRD4O60885 1362 aaPredicted RBP24.84■■□□□ 1.57
PTPN7-209ENST00000477554 ZNF692Q9BU19 519 aaPredicted RBP24.84■■□□□ 1.57
PTPN7-209ENST00000477554 SOX12O15370 315 aa24.83■■□□□ 1.57
PTPN7-209ENST00000477554 NME9Q86XW9 330 aa24.83■■□□□ 1.57
PTPN7-209ENST00000477554 ZBTB7CA1YPR0 619 aa24.81■■□□□ 1.56
PTPN7-209ENST00000477554 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
PTPN7-209ENST00000477554 CPDO75976 1380 aa24.81■■□□□ 1.56
PTPN7-209ENST00000477554 COL18A1P39060 1754 aa24.8■■□□□ 1.56
PTPN7-209ENST00000477554 FAM98CQ17RN3 349 aaKnown RBP24.78■■□□□ 1.56
PTPN7-209ENST00000477554 SEPT12Q8IYM1 358 aa24.78■■□□□ 1.56
PTPN7-209ENST00000477554 PUS7Q96PZ0 661 aaKnown RBP24.78■■□□□ 1.56
PTPN7-209ENST00000477554 NFAT5O94916 1531 aa24.78■■□□□ 1.56
PTPN7-209ENST00000477554 SPATA31A5Q5VU36 1347 aa24.78■■□□□ 1.56
PTPN7-209ENST00000477554 SPATA31A7Q8IWB4 1347 aa24.78■■□□□ 1.56
PTPN7-209ENST00000477554 TTC21AQ8NDW8 1320 aa24.78■■□□□ 1.56
PTPN7-209ENST00000477554 MYOM1P52179 1685 aa24.78■■□□□ 1.56
PTPN7-209ENST00000477554 TMF1P82094 1093 aa24.77■■□□□ 1.56
PTPN7-209ENST00000477554 RGPD5Q99666 1765 aa24.76■■□□□ 1.55
PTPN7-209ENST00000477554 LARP1Q6PKG0 1096 aaKnown RBP24.76■■□□□ 1.55
PTPN7-209ENST00000477554 AXIN2Q9Y2T1 843 aa24.76■■□□□ 1.55
PTPN7-209ENST00000477554 USP54Q70EL1 1684 aa24.75■■□□□ 1.55
PTPN7-209ENST00000477554 HDGFL2Q7Z4V5 671 aaPredicted RBP24.75■■□□□ 1.55
PTPN7-209ENST00000477554 EDC4Q6P2E9 1401 aaKnown RBP24.75■■□□□ 1.55
PTPN7-209ENST00000477554 ONECUT3O60422 494 aaPredicted RBP24.74■■□□□ 1.55
PTPN7-209ENST00000477554 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
PTPN7-209ENST00000477554 USP35Q9P2H5 1018 aa24.74■■□□□ 1.55
PTPN7-209ENST00000477554 COL5A2P05997 1499 aaPredicted RBP24.73■■□□□ 1.55
PTPN7-209ENST00000477554 ZEB1P37275 1124 aaPredicted RBP24.73■■□□□ 1.55
PTPN7-209ENST00000477554 SPATA31A1Q5TZJ5 1347 aa24.73■■□□□ 1.55
PTPN7-209ENST00000477554 USP31Q70CQ4 1352 aa24.72■■□□□ 1.55
PTPN7-209ENST00000477554 TERF2IPQ9NYB0 399 aa24.72■■□□□ 1.55
PTPN7-209ENST00000477554 THSD7AQ9UPZ6 1657 aa24.72■■□□□ 1.55
PTPN7-209ENST00000477554 ARHGEF25Q86VW2 580 aa24.71■■□□□ 1.55
PTPN7-209ENST00000477554 FBLN1P23142 703 aa24.7■■□□□ 1.55
PTPN7-209ENST00000477554 FAM182BQ5T319 152 aa24.7■■□□□ 1.55
PTPN7-209ENST00000477554 OVOS2A0A0J9YW53 1432 aa24.7■■□□□ 1.54
PTPN7-209ENST00000477554 OVOS2Q6IE36 1432 aa24.7■■□□□ 1.54
PTPN7-209ENST00000477554 AATKQ6ZMQ8 1374 aa24.69■■□□□ 1.54
PTPN7-209ENST00000477554 ANKRD36BQ8N2N9 1353 aa24.69■■□□□ 1.54
PTPN7-209ENST00000477554 A0A0G2JS52 829 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms