RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PHRF1Q9P1Y6 1649 aaKnown RBP9.86□□□□□ -0.83
RTFDC1-206ENST00000477485 ARHGEF28Q8N1W1 1705 aaKnown RBP9.86□□□□□ -0.83
RTFDC1-206ENST00000477485 SIRT1Q96EB6 747 aa9.86□□□□□ -0.83
RTFDC1-206ENST00000477485 TRAK1Q9UPV9 953 aa9.86□□□□□ -0.83
RTFDC1-206ENST00000477485 EN1Q05925 392 aaPredicted RBP9.85□□□□□ -0.83
RTFDC1-206ENST00000477485 NGDNQ8NEJ9 315 aaKnown RBP9.85□□□□□ -0.83
RTFDC1-206ENST00000477485 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
RTFDC1-206ENST00000477485 THSD7AQ9UPZ6 1657 aa9.85□□□□□ -0.83
RTFDC1-206ENST00000477485 TULP4Q9NRJ4 1543 aa9.85□□□□□ -0.83
RTFDC1-206ENST00000477485 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
RTFDC1-206ENST00000477485 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
RTFDC1-206ENST00000477485 ACIN1Q9UKV3 1341 aaKnown RBP9.83□□□□□ -0.84
RTFDC1-206ENST00000477485 ONECUT3O60422 494 aaPredicted RBP9.83□□□□□ -0.84
RTFDC1-206ENST00000477485 HRCP23327 699 aa9.83□□□□□ -0.84
RTFDC1-206ENST00000477485 R3HDM1Q15032 1099 aaKnown RBP9.83□□□□□ -0.84
RTFDC1-206ENST00000477485 STRN4Q9NRL3 753 aa9.83□□□□□ -0.84
RTFDC1-206ENST00000477485 ADGRB1O14514 1584 aa9.83□□□□□ -0.84
RTFDC1-206ENST00000477485 NUTM2GQ5VZR2 741 aa9.82□□□□□ -0.84
RTFDC1-206ENST00000477485 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
RTFDC1-206ENST00000477485 SPATA31A5Q5VU36 1347 aa9.82□□□□□ -0.84
RTFDC1-206ENST00000477485 SPATA31A7Q8IWB4 1347 aa9.82□□□□□ -0.84
RTFDC1-206ENST00000477485 PRR36Q9H6K5 1346 aa9.82□□□□□ -0.84
RTFDC1-206ENST00000477485 WASLO00401 505 aaPredicted RBP9.81□□□□□ -0.84
RTFDC1-206ENST00000477485 CHRNA2Q15822 529 aa9.81□□□□□ -0.84
RTFDC1-206ENST00000477485 DCAF11Q8TEB1 546 aa9.81□□□□□ -0.84
RTFDC1-206ENST00000477485 RREB1Q92766 1687 aa9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 NUP188Q5SRE5 1749 aa9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 TRIM37O94972 964 aa9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 ZC3H6P61129 1189 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 EZH2Q15910 746 aaKnown RBP9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 TOPAZ1Q8N9V7 1692 aa9.8□□□□□ -0.84
RTFDC1-206ENST00000477485 RAB3GAP2Q9H2M9 1393 aa9.79□□□□□ -0.84
RTFDC1-206ENST00000477485 EVA1CP58658 441 aa9.79□□□□□ -0.84
RTFDC1-206ENST00000477485 ATP7BP35670 1465 aa9.79□□□□□ -0.84
RTFDC1-206ENST00000477485 ZBTB7CA1YPR0 619 aa9.78□□□□□ -0.84
RTFDC1-206ENST00000477485 APBA3O96018 575 aa9.78□□□□□ -0.84
RTFDC1-206ENST00000477485 PDE3BQ13370 1112 aa9.78□□□□□ -0.84
RTFDC1-206ENST00000477485 NRKQ7Z2Y5 1582 aa9.78□□□□□ -0.84
RTFDC1-206ENST00000477485 SPATA31A1Q5TZJ5 1347 aa9.78□□□□□ -0.84
RTFDC1-206ENST00000477485 FAM196AQ6ZSG2 479 aa9.77□□□□□ -0.85
RTFDC1-206ENST00000477485 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-206ENST00000477485 AKAP12Q02952 1782 aa9.76□□□□□ -0.85
RTFDC1-206ENST00000477485 DISP2A7MBM2 1401 aa9.76□□□□□ -0.85
RTFDC1-206ENST00000477485 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
RTFDC1-206ENST00000477485 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 QRICH2Q9H0J4 1663 aa9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 ABTB2Q8N961 1025 aa9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 CDK19Q9BWU1 502 aa9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 PPP1R1BQ9UD71 204 aaPredicted RBP9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 SBF2Q86WG5 1849 aa9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 WNK3Q9BYP7 1800 aa9.75□□□□□ -0.85
RTFDC1-206ENST00000477485 LMO7Q8WWI1 1683 aa9.74□□□□□ -0.85
RTFDC1-206ENST00000477485 KIAA1210Q9ULL0 1709 aa9.74□□□□□ -0.85
RTFDC1-206ENST00000477485 NBPF8Q3BBV2 869 aa9.74□□□□□ -0.85
RTFDC1-206ENST00000477485 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
RTFDC1-206ENST00000477485 ACEP12821 1306 aa9.74□□□□□ -0.85
RTFDC1-206ENST00000477485 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
RTFDC1-206ENST00000477485 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
RTFDC1-206ENST00000477485 LARP1Q6PKG0 1096 aaKnown RBP9.73□□□□□ -0.85
RTFDC1-206ENST00000477485 CAMKK2Q96RR4 588 aa9.73□□□□□ -0.85
RTFDC1-206ENST00000477485 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
RTFDC1-206ENST00000477485 LRRC37A3O60309 1634 aa9.72□□□□□ -0.85
RTFDC1-206ENST00000477485 DCAF8L1A6NGE4 600 aa9.72□□□□□ -0.85
RTFDC1-206ENST00000477485 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
RTFDC1-206ENST00000477485 TCP11L2Q8N4U5 519 aa9.72□□□□□ -0.85
RTFDC1-206ENST00000477485 YY1P25490 414 aa9.71□□□□□ -0.86
RTFDC1-206ENST00000477485 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
RTFDC1-206ENST00000477485 POLR3AO14802 1390 aaPredicted RBP9.71□□□□□ -0.86
RTFDC1-206ENST00000477485 PPIP5K1Q6PFW1 1433 aa9.71□□□□□ -0.86
RTFDC1-206ENST00000477485 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-206ENST00000477485 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
RTFDC1-206ENST00000477485 BARGINQ6ZT62 677 aa9.7□□□□□ -0.86
RTFDC1-206ENST00000477485 COL5A2P05997 1499 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-206ENST00000477485 OVOS2A0A0G2JMS6 1433 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 KAT6BQ8WYB5 2073 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 STAC3Q96MF2 364 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 PEAK1Q9H792 1746 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 SPON1Q9HCB6 807 aa9.69□□□□□ -0.86
RTFDC1-206ENST00000477485 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 CRB1P82279 1406 aa9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 CPDO75976 1380 aa9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 PIAS4Q8N2W9 510 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 THRAP3Q9Y2W1 955 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-206ENST00000477485 MYOM1P52179 1685 aa9.67□□□□□ -0.86
RTFDC1-206ENST00000477485 USP19O94966 1318 aa9.67□□□□□ -0.86
RTFDC1-206ENST00000477485 SOX12O15370 315 aa9.67□□□□□ -0.86
RTFDC1-206ENST00000477485 GCP02774 474 aa9.67□□□□□ -0.86
RTFDC1-206ENST00000477485 CASZ1Q86V15 1759 aa9.67□□□□□ -0.86
RTFDC1-206ENST00000477485 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
RTFDC1-206ENST00000477485 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
RTFDC1-206ENST00000477485 KCNQ2O43526 872 aa9.66□□□□□ -0.86
RTFDC1-206ENST00000477485 NLRP6P59044 892 aa9.66□□□□□ -0.86
RTFDC1-206ENST00000477485 DDB1Q16531 1140 aa9.66□□□□□ -0.86
RTFDC1-206ENST00000477485 NBPF1Q3BBV0 1214 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms