RNA–Protein interactions for RNA: ENST00000477193.1

SRSF4-203, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 206 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-203ENST00000477193 HPS5Q9UPZ3 1129 aa6.26□□□□□ -1.41
SRSF4-203ENST00000477193 SOWAHBA6NEL2 793 aa6.25□□□□□ -1.41
SRSF4-203ENST00000477193 JUNDP17535 347 aa6.25□□□□□ -1.41
SRSF4-203ENST00000477193 MFAP1P55081 439 aaKnown RBP6.25□□□□□ -1.41
SRSF4-203ENST00000477193 KCNA1Q09470 495 aa6.25□□□□□ -1.41
SRSF4-203ENST00000477193 KANK4Q5T7N3 995 aaPredicted RBP6.25□□□□□ -1.41
SRSF4-203ENST00000477193 LHX8Q68G74 356 aa6.25□□□□□ -1.41
SRSF4-203ENST00000477193 FAM174AQ8TBP5 190 aa6.25□□□□□ -1.41
SRSF4-203ENST00000477193 MTMR7Q9Y216 660 aa6.25□□□□□ -1.41
SRSF4-203ENST00000477193 FMNL1O95466 1100 aaPredicted RBP6.24□□□□□ -1.41
SRSF4-203ENST00000477193 PPP4CP60510 307 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 PTPRNQ16849 979 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
SRSF4-203ENST00000477193 FAM160A2Q8N612 972 aaPredicted RBP6.24□□□□□ -1.41
SRSF4-203ENST00000477193 PNMA1Q8ND90 353 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 ANKK1Q8NFD2 765 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 OCSTAMPQ9BR26 566 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 PRR14Q9BWN1 585 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 ZMIZ1Q9ULJ6 1067 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
SRSF4-203ENST00000477193 VRTNQ9H8Y1 702 aa6.23□□□□□ -1.41
SRSF4-203ENST00000477193 TSR3Q9UJK0 312 aaKnown RBP6.23□□□□□ -1.41
SRSF4-203ENST00000477193 STK32AQ8WU08 396 aa6.22□□□□□ -1.41
SRSF4-203ENST00000477193 PRDM9Q9NQV7 894 aa6.22□□□□□ -1.41
SRSF4-203ENST00000477193 ZC3H4Q9UPT8 1303 aaKnown RBP6.22□□□□□ -1.41
SRSF4-203ENST00000477193 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 NR1I2O75469 434 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 DXOO77932 396 aaKnown RBP6.21□□□□□ -1.42
SRSF4-203ENST00000477193 SKIP12755 728 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 CTHP32929 405 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 MSS51Q4VC12 460 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 NFATC2IPQ8NCF5 419 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 IVNS1ABPQ9Y6Y0 642 aa6.21□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L5A8MUK1 530 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 PATL2C9JE40 543 aaKnown RBP6.2□□□□□ -1.42
SRSF4-203ENST00000477193 CCNYL3P0C7X3 344 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 ELOAQ14241 798 aaKnown RBP6.2□□□□□ -1.42
SRSF4-203ENST00000477193 TMEM164Q5U3C3 297 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 FOXD4L5Q5VV16 416 aaPredicted RBP6.2□□□□□ -1.42
SRSF4-203ENST00000477193 PLEKHM2Q8IWE5 1019 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 FOXD4L4Q8WXT5 416 aaPredicted RBP6.2□□□□□ -1.42
SRSF4-203ENST00000477193 FAM163AQ96GL9 167 aaPredicted RBP6.2□□□□□ -1.42
SRSF4-203ENST00000477193 EVA1BQ9NVM1 165 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 WBP1LQ9NX94 342 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 SLAIN2Q9P270 581 aa6.2□□□□□ -1.42
SRSF4-203ENST00000477193 GOLGA8CPA6NN73 597 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 MMP16P51512 607 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 KCNH2Q12809 1159 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 PHLDB3Q6NSJ2 640 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 ANKRD13DQ6ZTN6 518 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 WNT2BQ93097 391 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 NUDT12Q9BQG2 462 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 CEP126Q9P2H0 1117 aa6.19□□□□□ -1.42
SRSF4-203ENST00000477193 TLL1O43897 1013 aa6.18□□□□□ -1.42
SRSF4-203ENST00000477193 COPS2P61201 443 aa6.18□□□□□ -1.42
SRSF4-203ENST00000477193 CRTC2Q53ET0 693 aaPredicted RBP6.18□□□□□ -1.42
SRSF4-203ENST00000477193 PDXDC2PQ6P474 469 aa6.18□□□□□ -1.42
SRSF4-203ENST00000477193 ZNF428Q96B54 188 aa6.18□□□□□ -1.42
SRSF4-203ENST00000477193 SPSB2Q99619 263 aa6.18□□□□□ -1.42
SRSF4-203ENST00000477193 NOVA2Q9UNW9 492 aaKnown RBP6.18□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L15C9J2P7 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L10C9JJH3 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L13C9JLJ4 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L11C9JVI0 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L21D6R901 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L18D6R9N7 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L22D6RA61 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L17D6RBQ6 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L19D6RCP7 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L20D6RJB6 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 USP17L24Q0WX57 530 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 NCOA4Q13772 614 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 TSGA10IPQ3SY00 556 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 PTCRAQ6ISU1 281 aaPredicted RBP6.17□□□□□ -1.42
SRSF4-203ENST00000477193 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
SRSF4-203ENST00000477193 GPSM3Q9Y4H4 160 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 PCDHB9Q9Y5E1 797 aa6.17□□□□□ -1.42
SRSF4-203ENST00000477193 FAM196BA6NMK8 535 aa6.16□□□□□ -1.42
SRSF4-203ENST00000477193 PTK2Q05397 1052 aa6.16□□□□□ -1.42
SRSF4-203ENST00000477193 FAM69CQ0P6D2 419 aa6.16□□□□□ -1.42
SRSF4-203ENST00000477193 ADAM32Q8TC27 787 aa6.16□□□□□ -1.42
SRSF4-203ENST00000477193 GPKOWQ92917 476 aaPredicted RBP eCLIP6.16□□□□□ -1.423e-6■■□□□ 13.3
SRSF4-203ENST00000477193 STAC3Q96MF2 364 aa6.16□□□□□ -1.42
SRSF4-203ENST00000477193 CHIC2Q9UKJ5 165 aa6.16□□□□□ -1.42
SRSF4-203ENST00000477193 GNEQ9Y223 722 aaKnown RBP6.16□□□□□ -1.42
SRSF4-203ENST00000477193 PTK7Q13308 1070 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 TRAF7Q6Q0C0 670 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 THSD4Q6ZMP0 1018 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 SND1Q7KZF4 910 aaKnown RBP eCLIP6.15□□□□□ -1.42
SRSF4-203ENST00000477193 SH3BP5LQ7L8J4 393 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 RNF135Q8IUD6 432 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 PLPP7Q8NBV4 271 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 ARMC2Q8NEN0 867 aa6.15□□□□□ -1.42
SRSF4-203ENST00000477193 ADH1BP00325 375 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms