RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 PLEKHG3A1L390 1219 aa17.47■□□□□ 0.39
PRKD3-209ENST00000477132 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
PRKD3-209ENST00000477132 ZNF772Q68DY9 489 aaPredicted RBP17.47■□□□□ 0.39
PRKD3-209ENST00000477132 CABLES1Q8TDN4 633 aa17.47■□□□□ 0.39
PRKD3-209ENST00000477132 SBNO2Q9Y2G9 1366 aa17.47■□□□□ 0.39
PRKD3-209ENST00000477132 PLCH1Q4KWH8 1693 aa17.47■□□□□ 0.39
PRKD3-209ENST00000477132 PHRF1Q9P1Y6 1649 aaKnown RBP17.47■□□□□ 0.39
PRKD3-209ENST00000477132 AKAP12Q02952 1782 aa17.46■□□□□ 0.39
PRKD3-209ENST00000477132 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
PRKD3-209ENST00000477132 EVC2Q86UK5 1308 aa17.46■□□□□ 0.38
PRKD3-209ENST00000477132 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
PRKD3-209ENST00000477132 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
PRKD3-209ENST00000477132 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
PRKD3-209ENST00000477132 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
PRKD3-209ENST00000477132 SLIT2O94813 1529 aa17.42■□□□□ 0.38
PRKD3-209ENST00000477132 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
PRKD3-209ENST00000477132 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
PRKD3-209ENST00000477132 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
PRKD3-209ENST00000477132 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
PRKD3-209ENST00000477132 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
PRKD3-209ENST00000477132 USP21Q9UK80 565 aa17.41■□□□□ 0.38
PRKD3-209ENST00000477132 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
PRKD3-209ENST00000477132 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
PRKD3-209ENST00000477132 ATRNO75882 1429 aa17.4■□□□□ 0.38
PRKD3-209ENST00000477132 USP6P35125 1406 aa17.4■□□□□ 0.38
PRKD3-209ENST00000477132 PIK3C2AO00443 1686 aa17.39■□□□□ 0.37
PRKD3-209ENST00000477132 TESK2Q96S53 571 aa17.39■□□□□ 0.37
PRKD3-209ENST00000477132 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
PRKD3-209ENST00000477132 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.37
PRKD3-209ENST00000477132 ATAD2Q6PL18 1390 aa17.39■□□□□ 0.37
PRKD3-209ENST00000477132 RGS12O14924 1447 aa17.38■□□□□ 0.37
PRKD3-209ENST00000477132 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
PRKD3-209ENST00000477132 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
PRKD3-209ENST00000477132 ST20-MTHFSA0A0A6YYL1 179 aa17.38■□□□□ 0.37
PRKD3-209ENST00000477132 HAP1P54257 671 aaPredicted RBP17.38■□□□□ 0.37
PRKD3-209ENST00000477132 USP47Q96K76 1375 aa17.38■□□□□ 0.37
PRKD3-209ENST00000477132 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
PRKD3-209ENST00000477132 RXRBP28702 533 aa17.37■□□□□ 0.37
PRKD3-209ENST00000477132 NUTM2GQ5VZR2 741 aa17.37■□□□□ 0.37
PRKD3-209ENST00000477132 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
PRKD3-209ENST00000477132 GLI3P10071 1580 aa17.36■□□□□ 0.37
PRKD3-209ENST00000477132 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
PRKD3-209ENST00000477132 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
PRKD3-209ENST00000477132 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
PRKD3-209ENST00000477132 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
PRKD3-209ENST00000477132 BRD4O60885 1362 aaPredicted RBP17.33■□□□□ 0.36
PRKD3-209ENST00000477132 USP19O94966 1318 aa17.33■□□□□ 0.36
PRKD3-209ENST00000477132 ABTB2Q8N961 1025 aa17.33■□□□□ 0.36
PRKD3-209ENST00000477132 SLIT3O75094 1523 aa17.32■□□□□ 0.36
PRKD3-209ENST00000477132 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
PRKD3-209ENST00000477132 KIAA0232Q92628 1395 aa17.31■□□□□ 0.36
PRKD3-209ENST00000477132 LMO7Q8WWI1 1683 aa17.31■□□□□ 0.36
PRKD3-209ENST00000477132 USP54Q70EL1 1684 aa17.29■□□□□ 0.36
PRKD3-209ENST00000477132 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
PRKD3-209ENST00000477132 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
PRKD3-209ENST00000477132 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
PRKD3-209ENST00000477132 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
PRKD3-209ENST00000477132 MYOM1P52179 1685 aa17.29■□□□□ 0.36
PRKD3-209ENST00000477132 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
PRKD3-209ENST00000477132 ZC3H6P61129 1189 aaKnown RBP17.28■□□□□ 0.36
PRKD3-209ENST00000477132 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
PRKD3-209ENST00000477132 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
PRKD3-209ENST00000477132 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
PRKD3-209ENST00000477132 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
PRKD3-209ENST00000477132 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
PRKD3-209ENST00000477132 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
PRKD3-209ENST00000477132 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.36
PRKD3-209ENST00000477132 PRDM11Q9NQV5 511 aa17.27■□□□□ 0.36
PRKD3-209ENST00000477132 NLRP6P59044 892 aa17.26■□□□□ 0.35
PRKD3-209ENST00000477132 VPS72Q15906 364 aa17.26■□□□□ 0.35
PRKD3-209ENST00000477132 CPDO75976 1380 aa17.26■□□□□ 0.35
PRKD3-209ENST00000477132 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
PRKD3-209ENST00000477132 COL18A1P39060 1754 aa17.25■□□□□ 0.35
PRKD3-209ENST00000477132 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
PRKD3-209ENST00000477132 GCP02774 474 aa17.24■□□□□ 0.35
PRKD3-209ENST00000477132 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
PRKD3-209ENST00000477132 NFAT5O94916 1531 aa17.24■□□□□ 0.35
PRKD3-209ENST00000477132 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
PRKD3-209ENST00000477132 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
PRKD3-209ENST00000477132 TMF1P82094 1093 aa17.23■□□□□ 0.35
PRKD3-209ENST00000477132 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
PRKD3-209ENST00000477132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKD3-209ENST00000477132 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
PRKD3-209ENST00000477132 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
PRKD3-209ENST00000477132 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
PRKD3-209ENST00000477132 NME9Q86XW9 330 aa17.21■□□□□ 0.35
PRKD3-209ENST00000477132 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
PRKD3-209ENST00000477132 LTN1O94822 1766 aa17.2■□□□□ 0.34
PRKD3-209ENST00000477132 USP31Q70CQ4 1352 aa17.2■□□□□ 0.34
PRKD3-209ENST00000477132 TERF2IPQ9NYB0 399 aa17.2■□□□□ 0.34
PRKD3-209ENST00000477132 SPATA31A5Q5VU36 1347 aa17.2■□□□□ 0.34
PRKD3-209ENST00000477132 SPATA31A7Q8IWB4 1347 aa17.2■□□□□ 0.34
PRKD3-209ENST00000477132 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
PRKD3-209ENST00000477132 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
PRKD3-209ENST00000477132 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
PRKD3-209ENST00000477132 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKD3-209ENST00000477132 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
PRKD3-209ENST00000477132 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
PRKD3-209ENST00000477132 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
PRKD3-209ENST00000477132 SOX12O15370 315 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms