RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 VTI1AQ96AJ9 217 aa7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 WASHC2CQ9Y4E1 1318 aa7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 ANKRD62A6NC57 917 aa7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 PROX2Q3B8N5 592 aa7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 CLUAP1Q96AJ1 413 aa7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 TRIM44Q96DX7 344 aaPredicted RBP7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 HRO43593 1189 aa7.66□□□□□ -1.18
SPTLC3-205ENST00000476791 OSBPP22059 807 aa7.66□□□□□ -1.18
SPTLC3-205ENST00000476791 ZNF280DQ6N043 979 aa7.66□□□□□ -1.18
SPTLC3-205ENST00000476791 SEMA3EO15041 775 aa7.66□□□□□ -1.18
SPTLC3-205ENST00000476791 CCDC181Q5TID7 509 aa7.65□□□□□ -1.18
SPTLC3-205ENST00000476791 DIEXFQ68CQ4 756 aaKnown RBP7.65□□□□□ -1.18
SPTLC3-205ENST00000476791 MAP2K1Q02750 393 aaPredicted RBP7.64□□□□□ -1.19
SPTLC3-205ENST00000476791 KLHL42Q9P2K6 505 aa7.64□□□□□ -1.19
SPTLC3-205ENST00000476791 DDRGK1Q96HY6 314 aa7.64□□□□□ -1.19
SPTLC3-205ENST00000476791 GOLIM4O00461 696 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 GIMAP6Q6P9H5 292 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 PIK3R5Q8WYR1 880 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 SLC4A5Q9BY07 1137 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 PDCL3Q9H2J4 239 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 LONRF3Q496Y0 759 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 DNTTIP2Q5QJE6 756 aaKnown RBP7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 NBPF10Q6P3W6 841 aaKnown RBP7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 ANKRD23Q86SG2 305 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 PROCA1Q8NCQ7 364 aaPredicted RBP7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.63□□□□□ -1.19
SPTLC3-205ENST00000476791 MTA1Q13330 715 aa7.62□□□□□ -1.19
SPTLC3-205ENST00000476791 ZFYVE27Q5T4F4 411 aa7.62□□□□□ -1.19
SPTLC3-205ENST00000476791 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
SPTLC3-205ENST00000476791 IGF1RP08069 1367 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 RPGRIP1LQ68CZ1 1315 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 NBPF6Q5VWK0 638 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 ZKSCAN2Q63HK3 967 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 NBPF5PQ86XG9 351 aaPredicted RBP7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 BANK1Q8NDB2 785 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 NBPF4Q96M43 638 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 ABCC9O60706 1549 aa7.61□□□□□ -1.19
SPTLC3-205ENST00000476791 BHMG1C9JSJ3 638 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 BARGINQ6ZT62 677 aa7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 GPATCH3Q96I76 525 aa7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 MRPL50Q8N5N7 158 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 ZC3H15Q8WU90 426 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 KCTD12Q96CX2 325 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 GEMIN8Q9NWZ8 242 aaKnown RBP7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 KIAA1468Q9P260 1216 aa7.6□□□□□ -1.19
SPTLC3-205ENST00000476791 CLEC4GQ6UXB4 293 aa7.59□□□□□ -1.19
SPTLC3-205ENST00000476791 WASHC2AQ641Q2 1341 aa7.59□□□□□ -1.19
SPTLC3-205ENST00000476791 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
SPTLC3-205ENST00000476791 KIAA1522Q9P206 1035 aaPredicted RBP7.59□□□□□ -1.19
SPTLC3-205ENST00000476791 RABGEF1Q9UJ41 708 aa7.59□□□□□ -1.19
SPTLC3-205ENST00000476791 TRIM6-TRIM34B2RNG4 842 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 IPO8O15397 1037 aaKnown RBP7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 MSL3Q8N5Y2 521 aaKnown RBP7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 PMM1Q92871 262 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 ZBTB9Q96C00 473 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 NBPF3Q9H094 633 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 CREB3O43889 395 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 ERCC3P19447 782 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 CXorf38Q8TB03 319 aa7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 SEPT9Q9UHD8 586 aaPredicted RBP7.58□□□□□ -1.2
SPTLC3-205ENST00000476791 GOLGA8CPA6NN73 597 aa7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 TDO2P48775 406 aa7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 CDCA7LQ96GN5 454 aa7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 TSKSQ9UJT2 592 aa7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 UTP14CQ5TAP6 766 aaKnown RBP7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 NUTM2GQ5VZR2 741 aa7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 CDCA7Q9BWT1 371 aaPredicted RBP7.57□□□□□ -1.2
SPTLC3-205ENST00000476791 NRDCO43847 1150 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 PARNO95453 639 aaKnown RBP7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 GAS2L2Q8NHY3 880 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 YY1AP1Q9H869 796 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 ANP32CO43423 234 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 SH3BP5O60239 455 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 APLP1P51693 650 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 PRSS12P56730 875 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 GABBR1Q9UBS5 961 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 PPP1R1BQ9UD71 204 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 NUB1Q9Y5A7 615 aa7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 CTDP1Q9Y5B0 961 aaPredicted RBP7.56□□□□□ -1.2
SPTLC3-205ENST00000476791 NUTM2FA1L443 756 aa7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 SATB1Q01826 763 aa7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 CERKQ8TCT0 537 aa7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 CCDC97Q96F63 343 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 NPDC1Q9NQX5 325 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 RAI14Q9P0K7 980 aa7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 FAM198AQ9UFP1 575 aa7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 ZNF777Q9ULD5 760 aaPredicted RBP7.55□□□□□ -1.2
SPTLC3-205ENST00000476791 SMAPO00193 183 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 BDNFP23560 247 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 WNT2BQ93097 391 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 MKL1Q969V6 931 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 CALR3Q96L12 384 aaKnown RBP7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 ARHGEF10LQ9HCE6 1279 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 FRMD4BQ9Y2L6 1034 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 DCAF1Q9Y4B6 1507 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 MYO15BQ96JP2 1530 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 PTPN5P54829 565 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms