RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
BRCA1-213ENST00000476777 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
BRCA1-213ENST00000476777 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
BRCA1-213ENST00000476777 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
BRCA1-213ENST00000476777 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
BRCA1-213ENST00000476777 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
BRCA1-213ENST00000476777 THSD7AQ9UPZ6 1657 aa16.93■□□□□ 0.3
BRCA1-213ENST00000476777 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
BRCA1-213ENST00000476777 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
BRCA1-213ENST00000476777 HIRIP3Q9BW71 556 aaPredicted RBP16.92■□□□□ 0.3
BRCA1-213ENST00000476777 TNS1Q9HBL0 1735 aaKnown RBP16.91■□□□□ 0.3
BRCA1-213ENST00000476777 CAMKK2Q96RR4 588 aa16.91■□□□□ 0.3
BRCA1-213ENST00000476777 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
BRCA1-213ENST00000476777 SPATA31A1Q5TZJ5 1347 aa16.9■□□□□ 0.3
BRCA1-213ENST00000476777 ADGRB1O14514 1584 aa16.89■□□□□ 0.3
BRCA1-213ENST00000476777 TRIM37O94972 964 aa16.89■□□□□ 0.29
BRCA1-213ENST00000476777 CRYBG1Q9Y4K1 1723 aa16.89■□□□□ 0.29
BRCA1-213ENST00000476777 MINK1Q8N4C8 1332 aaPredicted RBP16.89■□□□□ 0.29
BRCA1-213ENST00000476777 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
BRCA1-213ENST00000476777 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
BRCA1-213ENST00000476777 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
BRCA1-213ENST00000476777 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
BRCA1-213ENST00000476777 WASLO00401 505 aaPredicted RBP16.87■□□□□ 0.29
BRCA1-213ENST00000476777 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
BRCA1-213ENST00000476777 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
BRCA1-213ENST00000476777 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
BRCA1-213ENST00000476777 APBA3O96018 575 aa16.85■□□□□ 0.29
BRCA1-213ENST00000476777 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
BRCA1-213ENST00000476777 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
BRCA1-213ENST00000476777 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
BRCA1-213ENST00000476777 BARGINQ6ZT62 677 aa16.82■□□□□ 0.28
BRCA1-213ENST00000476777 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
BRCA1-213ENST00000476777 USP35Q9P2H5 1018 aa16.81■□□□□ 0.28
BRCA1-213ENST00000476777 YY1P25490 414 aa16.8■□□□□ 0.28
BRCA1-213ENST00000476777 NUDT16Q96DE0 195 aaKnown RBP16.8■□□□□ 0.28
BRCA1-213ENST00000476777 ATP7BP35670 1465 aa16.8■□□□□ 0.28
BRCA1-213ENST00000476777 RREB1Q92766 1687 aa16.79■□□□□ 0.28
BRCA1-213ENST00000476777 PDE3BQ13370 1112 aa16.79■□□□□ 0.28
BRCA1-213ENST00000476777 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
BRCA1-213ENST00000476777 SSH2Q76I76 1423 aa16.79■□□□□ 0.28
BRCA1-213ENST00000476777 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
BRCA1-213ENST00000476777 NBPF8Q3BBV2 869 aa16.78■□□□□ 0.28
BRCA1-213ENST00000476777 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
BRCA1-213ENST00000476777 KDM2AQ9Y2K7 1162 aa16.78■□□□□ 0.28
BRCA1-213ENST00000476777 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
BRCA1-213ENST00000476777 EVA1CP58658 441 aa16.77■□□□□ 0.28
BRCA1-213ENST00000476777 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
BRCA1-213ENST00000476777 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
BRCA1-213ENST00000476777 TCP11L2Q8N4U5 519 aa16.76■□□□□ 0.27
BRCA1-213ENST00000476777 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
BRCA1-213ENST00000476777 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
BRCA1-213ENST00000476777 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
BRCA1-213ENST00000476777 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
BRCA1-213ENST00000476777 UTRNP46939 3433 aa16.74■□□□□ 0.27
BRCA1-213ENST00000476777 CDK19Q9BWU1 502 aa16.74■□□□□ 0.27
BRCA1-213ENST00000476777 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
BRCA1-213ENST00000476777 CPDO75976 1380 aa16.74■□□□□ 0.27
BRCA1-213ENST00000476777 ACEP12821 1306 aa16.73■□□□□ 0.27
BRCA1-213ENST00000476777 STAC3Q96MF2 364 aa16.73■□□□□ 0.27
BRCA1-213ENST00000476777 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
BRCA1-213ENST00000476777 KCNQ2O43526 872 aa16.72■□□□□ 0.27
BRCA1-213ENST00000476777 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
BRCA1-213ENST00000476777 THRAP3Q9Y2W1 955 aaKnown RBP16.72■□□□□ 0.27
BRCA1-213ENST00000476777 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
BRCA1-213ENST00000476777 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
BRCA1-213ENST00000476777 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
BRCA1-213ENST00000476777 USP19O94966 1318 aa16.71■□□□□ 0.27
BRCA1-213ENST00000476777 PLEKHG3A1L390 1219 aa16.71■□□□□ 0.27
BRCA1-213ENST00000476777 ABTB2Q8N961 1025 aa16.71■□□□□ 0.27
BRCA1-213ENST00000476777 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
BRCA1-213ENST00000476777 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
BRCA1-213ENST00000476777 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
BRCA1-213ENST00000476777 PARP4Q9UKK3 1724 aaKnown RBP16.68■□□□□ 0.26
BRCA1-213ENST00000476777 C11orf95C9JLR9 678 aaPredicted RBP16.68■□□□□ 0.26
BRCA1-213ENST00000476777 GCP02774 474 aa16.68■□□□□ 0.26
BRCA1-213ENST00000476777 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
BRCA1-213ENST00000476777 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
BRCA1-213ENST00000476777 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
BRCA1-213ENST00000476777 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
BRCA1-213ENST00000476777 OVOS2A0A0G2JMS6 1433 aa16.65■□□□□ 0.26
BRCA1-213ENST00000476777 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
BRCA1-213ENST00000476777 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
BRCA1-213ENST00000476777 PLSCR1O15162 318 aa16.65■□□□□ 0.26
BRCA1-213ENST00000476777 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
BRCA1-213ENST00000476777 CRB1P82279 1406 aa16.64■□□□□ 0.25
BRCA1-213ENST00000476777 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
BRCA1-213ENST00000476777 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
BRCA1-213ENST00000476777 PTF1AQ7RTS3 328 aa16.63■□□□□ 0.25
BRCA1-213ENST00000476777 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
BRCA1-213ENST00000476777 PROM2Q8N271 834 aa16.62■□□□□ 0.25
BRCA1-213ENST00000476777 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-213ENST00000476777 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-213ENST00000476777 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
BRCA1-213ENST00000476777 DDB1Q16531 1140 aa16.61■□□□□ 0.25
BRCA1-213ENST00000476777 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
BRCA1-213ENST00000476777 PPIP5K1Q6PFW1 1433 aa16.61■□□□□ 0.25
BRCA1-213ENST00000476777 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
BRCA1-213ENST00000476777 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
BRCA1-213ENST00000476777 SRPK2P78362 688 aaKnown RBP16.59■□□□□ 0.25
BRCA1-213ENST00000476777 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms