RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 GOLGA6L3A6NEY3 463 aa5.32□□□□□ -1.56
CD55-208ENST00000476590 IRF5Q13568 498 aa5.32□□□□□ -1.56
CD55-208ENST00000476590 FAM43BQ6ZT52 329 aaPredicted RBP5.32□□□□□ -1.56
CD55-208ENST00000476590 WDR70Q9NW82 654 aa5.32□□□□□ -1.56
CD55-208ENST00000476590 WRNQ14191 1432 aaPredicted RBP eCLIP5.31□□□□□ -1.56
CD55-208ENST00000476590 CLUAP1Q96AJ1 413 aa5.31□□□□□ -1.56
CD55-208ENST00000476590 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
CD55-208ENST00000476590 NCAPD3P42695 1498 aa5.31□□□□□ -1.56
CD55-208ENST00000476590 NACADO15069 1562 aa5.31□□□□□ -1.56
CD55-208ENST00000476590 ZSCAN20P17040 1043 aaPredicted RBP5.31□□□□□ -1.56
CD55-208ENST00000476590 HS6ST3Q8IZP7 471 aa5.31□□□□□ -1.56
CD55-208ENST00000476590 DNAJC2Q99543 621 aaKnown RBP5.31□□□□□ -1.56
CD55-208ENST00000476590 YY1AP1Q9H869 796 aa5.31□□□□□ -1.56
CD55-208ENST00000476590 ESPNB1AK53 854 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 CC2D1BQ5T0F9 858 aaKnown RBP5.29□□□□□ -1.56
CD55-208ENST00000476590 KIAA1211Q6ZU35 1233 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 ZNF526Q8TF50 670 aaPredicted RBP5.29□□□□□ -1.56
CD55-208ENST00000476590 ZNF516Q92618 1163 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 ADAMTS8Q9UP79 889 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 RALBP1Q15311 655 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 CEP120Q8N960 986 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 PSMD1Q99460 953 aa5.29□□□□□ -1.56
CD55-208ENST00000476590 KDM4AO75164 1064 aa5.28□□□□□ -1.56
CD55-208ENST00000476590 IRS1P35568 1242 aa5.28□□□□□ -1.56
CD55-208ENST00000476590 SETQ01105 290 aaPredicted RBP5.28□□□□□ -1.56
CD55-208ENST00000476590 RETREG2Q8NC44 543 aa5.28□□□□□ -1.56
CD55-208ENST00000476590 GEMIN8Q9NWZ8 242 aaKnown RBP5.28□□□□□ -1.56
CD55-208ENST00000476590 BAZ1BQ9UIG0 1483 aaKnown RBP5.28□□□□□ -1.56
CD55-208ENST00000476590 TCERG1O14776 1098 aaKnown RBP5.28□□□□□ -1.56
CD55-208ENST00000476590 RIPK4P57078 832 aa5.28□□□□□ -1.56
CD55-208ENST00000476590 CCDC94Q9BW85 323 aaPredicted RBP5.28□□□□□ -1.56
CD55-208ENST00000476590 CARD10Q9BWT7 1032 aa5.28□□□□□ -1.56
CD55-208ENST00000476590 EMID1Q96A84 441 aaPredicted RBP5.27□□□□□ -1.57
CD55-208ENST00000476590 PRDM16Q9HAZ2 1276 aa5.27□□□□□ -1.57
CD55-208ENST00000476590 FRAT2O75474 233 aaPredicted RBP5.26□□□□□ -1.57
CD55-208ENST00000476590 NGEFQ8N5V2 710 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 FAM13BQ9NYF5 915 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 ERBB4Q15303 1308 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 ANP32CO43423 234 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 TRAK2O60296 914 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 MS4A1P11836 297 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 NBPF20Q3BBV1 942 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.26□□□□□ -1.57
CD55-208ENST00000476590 P3H3Q8IVL6 736 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 NKX2-3Q8TAU0 364 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 FBXW7Q969H0 707 aa5.26□□□□□ -1.57
CD55-208ENST00000476590 ZMYND10O75800 440 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 XRCC6P12956 609 aaKnown RBP eCLIP5.25□□□□□ -1.57
CD55-208ENST00000476590 EGFL6Q8IUX8 553 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 PPP1R3GB7ZBB8 358 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 ONECUT3O60422 494 aaPredicted RBP5.25□□□□□ -1.57
CD55-208ENST00000476590 OFD1O75665 1012 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 SLURP2P0DP57 97 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 PDE4AP27815 886 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 OS9Q13438 667 aaPredicted RBP5.25□□□□□ -1.57
CD55-208ENST00000476590 RNF25Q96BH1 459 aaPredicted RBP5.25□□□□□ -1.57
CD55-208ENST00000476590 BACH2Q9BYV9 841 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 KDM4CQ9H3R0 1056 aa5.25□□□□□ -1.57
CD55-208ENST00000476590 ZNF777Q9ULD5 760 aaPredicted RBP5.25□□□□□ -1.57
CD55-208ENST00000476590 DYNC1I1O14576 645 aa5.24□□□□□ -1.57
CD55-208ENST00000476590 HNRNPUQ00839 825 aaKnown RBP eCLIP5.24□□□□□ -1.57
CD55-208ENST00000476590 CCDC125Q86Z20 511 aa5.24□□□□□ -1.57
CD55-208ENST00000476590 GALNT6Q8NCL4 622 aa5.24□□□□□ -1.57
CD55-208ENST00000476590 SPOCK3Q9BQ16 436 aa5.24□□□□□ -1.57
CD55-208ENST00000476590 CGNQ9P2M7 1197 aaKnown RBP5.24□□□□□ -1.57
CD55-208ENST00000476590 PHF8Q9UPP1 1060 aa5.24□□□□□ -1.57
CD55-208ENST00000476590 PEG3Q9GZU2 1588 aa5.24□□□□□ -1.57
CD55-208ENST00000476590 FSD2A1L4K1 749 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 FOSBP53539 338 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 FAM98CQ17RN3 349 aaKnown RBP5.23□□□□□ -1.57
CD55-208ENST00000476590 CCDC27Q2M243 656 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 TSPYL1Q9H0U9 437 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 POGKQ9P215 609 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 UNCXA6NJT0 531 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 YBX3P16989 372 aaKnown RBP eCLIP5.23□□□□□ -1.57
CD55-208ENST00000476590 BARGINQ6ZT62 677 aa5.23□□□□□ -1.57
CD55-208ENST00000476590 ZBED9Q6R2W3 1325 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 SEMA3EO15041 775 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 MRE11P49959 708 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 HSP90AB3PQ58FF7 597 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 MYH16Q9H6N6 1097 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 CIZ1Q9ULV3 898 aaPredicted RBP5.22□□□□□ -1.57
CD55-208ENST00000476590 CADPSQ9ULU8 1353 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 RNF223E7ERA6 249 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 SMARCA5O60264 1052 aaPredicted RBP5.22□□□□□ -1.57
CD55-208ENST00000476590 PPP1R15AO75807 674 aaPredicted RBP5.22□□□□□ -1.57
CD55-208ENST00000476590 ANAPC15P60006 121 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 DDX10Q13206 875 aaKnown RBP5.22□□□□□ -1.57
CD55-208ENST00000476590 CC2D2BQ6DHV5 1058 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 GPATCH11Q8N954 259 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 TMC1Q8TDI8 760 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 FAM117AQ9C073 453 aa5.22□□□□□ -1.57
CD55-208ENST00000476590 CADPS2Q86UW7 1296 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 ANKLE1Q8NAG6 615 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 BANK1Q8NDB2 785 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 ISY1Q9ULR0 285 aaKnown RBP5.21□□□□□ -1.58
CD55-208ENST00000476590 SH3BP1Q9Y3L3 701 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 LMOD3Q0VAK6 560 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 NBPF1Q3BBV0 1214 aa5.21□□□□□ -1.58
CD55-208ENST00000476590 LIAT1Q6ZQX7 453 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms