RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.73
TMCO1-205ENST00000476143 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.72
TMCO1-205ENST00000476143 CABP2Q9NPB3 220 aa19.58■□□□□ 0.72
TMCO1-205ENST00000476143 NWD2Q9ULI1 1742 aa19.58■□□□□ 0.72
TMCO1-205ENST00000476143 BCL9LQ86UU0 1499 aa19.58■□□□□ 0.72
TMCO1-205ENST00000476143 SLIT2O94813 1529 aa19.57■□□□□ 0.72
TMCO1-205ENST00000476143 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
TMCO1-205ENST00000476143 NBPF8Q3BBV2 869 aa19.56■□□□□ 0.72
TMCO1-205ENST00000476143 CCDC9Q9Y3X0 531 aaKnown RBP19.56■□□□□ 0.72
TMCO1-205ENST00000476143 RALGAPBQ86X10 1494 aa19.55■□□□□ 0.72
TMCO1-205ENST00000476143 GJD4Q96KN9 370 aaPredicted RBP19.55■□□□□ 0.72
TMCO1-205ENST00000476143 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
TMCO1-205ENST00000476143 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
TMCO1-205ENST00000476143 ABTB2Q8N961 1025 aa19.53■□□□□ 0.72
TMCO1-205ENST00000476143 PRDM11Q9NQV5 511 aa19.52■□□□□ 0.72
TMCO1-205ENST00000476143 ATAD2Q6PL18 1390 aa19.52■□□□□ 0.72
TMCO1-205ENST00000476143 CABP1Q9NZU7 370 aa19.51■□□□□ 0.71
TMCO1-205ENST00000476143 VPS72Q15906 364 aa19.5■□□□□ 0.71
TMCO1-205ENST00000476143 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
TMCO1-205ENST00000476143 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.71
TMCO1-205ENST00000476143 CRYBG1Q9Y4K1 1723 aa19.5■□□□□ 0.71
TMCO1-205ENST00000476143 PHRF1Q9P1Y6 1649 aaKnown RBP19.5■□□□□ 0.71
TMCO1-205ENST00000476143 SBNO2Q9Y2G9 1366 aa19.49■□□□□ 0.71
TMCO1-205ENST00000476143 FAM83GA6ND36 823 aa19.49■□□□□ 0.71
TMCO1-205ENST00000476143 SLC24A1O60721 1099 aa19.49■□□□□ 0.71
TMCO1-205ENST00000476143 NUTM2GQ5VZR2 741 aa19.49■□□□□ 0.71
TMCO1-205ENST00000476143 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
TMCO1-205ENST00000476143 BTG4Q9NY30 223 aa19.49■□□□□ 0.71
TMCO1-205ENST00000476143 ZNF692Q9BU19 519 aaPredicted RBP19.48■□□□□ 0.71
TMCO1-205ENST00000476143 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
TMCO1-205ENST00000476143 A0A0G2JS52 829 aa19.47■□□□□ 0.71
TMCO1-205ENST00000476143 MYT1Q01538 1121 aa19.47■□□□□ 0.71
TMCO1-205ENST00000476143 USP6P35125 1406 aa19.47■□□□□ 0.71
TMCO1-205ENST00000476143 GLI3P10071 1580 aa19.46■□□□□ 0.71
TMCO1-205ENST00000476143 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
TMCO1-205ENST00000476143 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
TMCO1-205ENST00000476143 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
TMCO1-205ENST00000476143 TIMELESSQ9UNS1 1208 aa19.44■□□□□ 0.7
TMCO1-205ENST00000476143 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
TMCO1-205ENST00000476143 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
TMCO1-205ENST00000476143 EVA1CP58658 441 aa19.42■□□□□ 0.7
TMCO1-205ENST00000476143 NLRP6P59044 892 aa19.42■□□□□ 0.7
TMCO1-205ENST00000476143 SEPT12Q8IYM1 358 aa19.41■□□□□ 0.7
TMCO1-205ENST00000476143 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
TMCO1-205ENST00000476143 USP19O94966 1318 aa19.41■□□□□ 0.7
TMCO1-205ENST00000476143 CHRNA2Q15822 529 aa19.4■□□□□ 0.7
TMCO1-205ENST00000476143 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
TMCO1-205ENST00000476143 TTC21AQ8NDW8 1320 aa19.4■□□□□ 0.7
TMCO1-205ENST00000476143 KTN1Q86UP2 1357 aaKnown RBP19.4■□□□□ 0.7
TMCO1-205ENST00000476143 GCP02774 474 aa19.39■□□□□ 0.69
TMCO1-205ENST00000476143 CCDC125Q86Z20 511 aa19.39■□□□□ 0.69
TMCO1-205ENST00000476143 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
TMCO1-205ENST00000476143 CPDO75976 1380 aa19.39■□□□□ 0.69
TMCO1-205ENST00000476143 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
TMCO1-205ENST00000476143 TTC21BQ7Z4L5 1316 aa19.37■□□□□ 0.69
TMCO1-205ENST00000476143 FAM98CQ17RN3 349 aaKnown RBP19.37■□□□□ 0.69
TMCO1-205ENST00000476143 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
TMCO1-205ENST00000476143 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
TMCO1-205ENST00000476143 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
TMCO1-205ENST00000476143 SPATA31A5Q5VU36 1347 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 SPATA31A7Q8IWB4 1347 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 ST20-MTHFSA0A0A6YYL1 179 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
TMCO1-205ENST00000476143 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
TMCO1-205ENST00000476143 KRT27Q7Z3Y8 459 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 KCNH5Q8NCM2 988 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 BRWD3Q6RI45 1802 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 MON2Q7Z3U7 1717 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 PIK3C2AO00443 1686 aa19.36■□□□□ 0.69
TMCO1-205ENST00000476143 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
TMCO1-205ENST00000476143 NINLQ9Y2I6 1382 aa19.35■□□□□ 0.69
TMCO1-205ENST00000476143 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
TMCO1-205ENST00000476143 USP47Q96K76 1375 aa19.34■□□□□ 0.69
TMCO1-205ENST00000476143 SLIT3O75094 1523 aa19.34■□□□□ 0.69
TMCO1-205ENST00000476143 TMF1P82094 1093 aa19.33■□□□□ 0.68
TMCO1-205ENST00000476143 SPATA31A1Q5TZJ5 1347 aa19.32■□□□□ 0.68
TMCO1-205ENST00000476143 CDCA8Q53HL2 280 aa19.32■□□□□ 0.68
TMCO1-205ENST00000476143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
TMCO1-205ENST00000476143 USP35Q9P2H5 1018 aa19.31■□□□□ 0.68
TMCO1-205ENST00000476143 LMO7Q8WWI1 1683 aa19.3■□□□□ 0.68
TMCO1-205ENST00000476143 BLMP54132 1417 aaPredicted RBP19.3■□□□□ 0.68
TMCO1-205ENST00000476143 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
TMCO1-205ENST00000476143 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
TMCO1-205ENST00000476143 EDC4Q6P2E9 1401 aaKnown RBP19.29■□□□□ 0.68
TMCO1-205ENST00000476143 SOX12O15370 315 aa19.29■□□□□ 0.68
TMCO1-205ENST00000476143 TESK2Q96S53 571 aa19.29■□□□□ 0.68
TMCO1-205ENST00000476143 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
TMCO1-205ENST00000476143 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
TMCO1-205ENST00000476143 THRAP3Q9Y2W1 955 aaKnown RBP19.28■□□□□ 0.68
TMCO1-205ENST00000476143 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.68
TMCO1-205ENST00000476143 A0A1W2PP64 1363 aa19.27■□□□□ 0.68
TMCO1-205ENST00000476143 COL5A2P05997 1499 aaPredicted RBP19.27■□□□□ 0.67
TMCO1-205ENST00000476143 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
TMCO1-205ENST00000476143 LARP1Q6PKG0 1096 aaKnown RBP19.26■□□□□ 0.67
TMCO1-205ENST00000476143 BARGINQ6ZT62 677 aa19.26■□□□□ 0.67
TMCO1-205ENST00000476143 CRB1P82279 1406 aa19.25■□□□□ 0.67
TMCO1-205ENST00000476143 CD163L1Q9NR16 1453 aa19.25■□□□□ 0.67
TMCO1-205ENST00000476143 CSB-PGBD3P0DP91 1061 aa19.25■□□□□ 0.67
TMCO1-205ENST00000476143 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
TMCO1-205ENST00000476143 USP31Q70CQ4 1352 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms