RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
SLF1-204ENST00000475916 BLOC1S3Q6QNY0 202 aa10.25□□□□□ -0.77
SLF1-204ENST00000475916 RNF19BQ6ZMZ0 732 aa10.25□□□□□ -0.77
SLF1-204ENST00000475916 SCUBE3Q8IX30 993 aa10.25□□□□□ -0.77
SLF1-204ENST00000475916 UCN2Q96RP3 112 aa10.25□□□□□ -0.77
SLF1-204ENST00000475916 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
SLF1-204ENST00000475916 JUNDP17535 347 aa10.24□□□□□ -0.77
SLF1-204ENST00000475916 MCCD1P59942 119 aaPredicted RBP10.24□□□□□ -0.77
SLF1-204ENST00000475916 LSM11P83369 360 aaKnown RBP eCLIP10.24□□□□□ -0.77
SLF1-204ENST00000475916 TBC1D9Q6ZT07 1266 aa10.24□□□□□ -0.77
SLF1-204ENST00000475916 NFATC2IPQ8NCF5 419 aa10.24□□□□□ -0.77
SLF1-204ENST00000475916 FBXO45P0C2W1 286 aa10.23□□□□□ -0.77
SLF1-204ENST00000475916 PTK2Q05397 1052 aa10.23□□□□□ -0.77
SLF1-204ENST00000475916 MFAP1P55081 439 aaKnown RBP10.22□□□□□ -0.77
SLF1-204ENST00000475916 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
SLF1-204ENST00000475916 WNT2BQ93097 391 aa10.21□□□□□ -0.77
SLF1-204ENST00000475916 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
SLF1-204ENST00000475916 GPSM3Q9Y4H4 160 aa10.21□□□□□ -0.77
SLF1-204ENST00000475916 SKIP12755 728 aa10.2□□□□□ -0.78
SLF1-204ENST00000475916 APLP1P51693 650 aa10.2□□□□□ -0.78
SLF1-204ENST00000475916 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
SLF1-204ENST00000475916 NBPF14Q5TI25 921 aa10.2□□□□□ -0.78
SLF1-204ENST00000475916 F12P00748 615 aaPredicted RBP10.19□□□□□ -0.78
SLF1-204ENST00000475916 CCNYL3P0C7X3 344 aa10.19□□□□□ -0.78
SLF1-204ENST00000475916 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
SLF1-204ENST00000475916 BCAMP50895 628 aa10.18□□□□□ -0.78
SLF1-204ENST00000475916 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
SLF1-204ENST00000475916 SPSB2Q99619 263 aa10.18□□□□□ -0.78
SLF1-204ENST00000475916 MAP10Q9P2G4 905 aa10.18□□□□□ -0.78
SLF1-204ENST00000475916 HRO43593 1189 aa10.17□□□□□ -0.78
SLF1-204ENST00000475916 ELOAQ14241 798 aaKnown RBP10.17□□□□□ -0.78
SLF1-204ENST00000475916 MSS51Q4VC12 460 aa10.17□□□□□ -0.78
SLF1-204ENST00000475916 PDXDC2PQ6P474 469 aa10.17□□□□□ -0.78
SLF1-204ENST00000475916 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
SLF1-204ENST00000475916 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
SLF1-204ENST00000475916 USP17L3A6NCW0 530 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 USP17L4A6NCW7 530 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 LZTS3O60299 673 aaPredicted RBP10.16□□□□□ -0.78
SLF1-204ENST00000475916 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
SLF1-204ENST00000475916 USP17L2Q6R6M4 530 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 USP17L1Q7RTZ2 530 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 PLEKHM2Q8IWE5 1019 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 PCDHB9Q9Y5E1 797 aa10.16□□□□□ -0.78
SLF1-204ENST00000475916 USP17L5A8MUK1 530 aa10.15□□□□□ -0.78
SLF1-204ENST00000475916 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
SLF1-204ENST00000475916 RNF135Q8IUD6 432 aa10.14□□□□□ -0.79
SLF1-204ENST00000475916 NOVA2Q9UNW9 492 aaKnown RBP10.14□□□□□ -0.79
SLF1-204ENST00000475916 IVNS1ABPQ9Y6Y0 642 aa10.14□□□□□ -0.79
SLF1-204ENST00000475916 TMEM88BA6NKF7 163 aa10.13□□□□□ -0.79
SLF1-204ENST00000475916 ATP5J2-PTCD1G3V325 749 aa10.13□□□□□ -0.79
SLF1-204ENST00000475916 KANK4Q5T7N3 995 aaPredicted RBP10.13□□□□□ -0.79
SLF1-204ENST00000475916 ZBTB33Q86T24 672 aa10.13□□□□□ -0.79
SLF1-204ENST00000475916 CEP126Q9P2H0 1117 aa10.13□□□□□ -0.79
SLF1-204ENST00000475916 MTMR7Q9Y216 660 aa10.13□□□□□ -0.79
SLF1-204ENST00000475916 PIK3CDO00329 1044 aa10.12□□□□□ -0.79
SLF1-204ENST00000475916 DXOO77932 396 aaKnown RBP10.12□□□□□ -0.79
SLF1-204ENST00000475916 CCDC27Q2M243 656 aa10.12□□□□□ -0.79
SLF1-204ENST00000475916 RGS22Q8NE09 1264 aa10.12□□□□□ -0.79
SLF1-204ENST00000475916 CCER1Q8TC90 406 aaPredicted RBP10.12□□□□□ -0.79
SLF1-204ENST00000475916 ARHGAP9Q9BRR9 750 aa10.12□□□□□ -0.79
SLF1-204ENST00000475916 MKRN1Q9UHC7 482 aaKnown RBP10.12□□□□□ -0.79
SLF1-204ENST00000475916 CARNS1A5YM72 827 aa10.11□□□□□ -0.79
SLF1-204ENST00000475916 MAP7D1Q3KQU3 841 aa10.11□□□□□ -0.79
SLF1-204ENST00000475916 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
SLF1-204ENST00000475916 FAM196BA6NMK8 535 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 RASA1P20936 1047 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 MMP16P51512 607 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 COPS2P61201 443 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 EML3Q32P44 896 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 DEPDC4Q8N2C3 294 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
SLF1-204ENST00000475916 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
SLF1-204ENST00000475916 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
SLF1-204ENST00000475916 DZIP3Q86Y13 1208 aaKnown RBP10.09□□□□□ -0.79
SLF1-204ENST00000475916 ATP1A2P50993 1020 aa10.08□□□□□ -0.8
SLF1-204ENST00000475916 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.8
SLF1-204ENST00000475916 FAM160A2Q8N612 972 aaPredicted RBP10.08□□□□□ -0.8
SLF1-204ENST00000475916 PLPP7Q8NBV4 271 aa10.08□□□□□ -0.8
SLF1-204ENST00000475916 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
SLF1-204ENST00000475916 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L10C9JJH3 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L12C9JPN9 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L21D6R901 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 NCOA4Q13772 614 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 TMEM164Q5U3C3 297 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 ADAM32Q8TC27 787 aa10.07□□□□□ -0.8
SLF1-204ENST00000475916 CDCA7Q9BWT1 371 aaPredicted RBP10.07□□□□□ -0.8
SLF1-204ENST00000475916 ADH1BP00325 375 aa10.06□□□□□ -0.8
SLF1-204ENST00000475916 AGERQ15109 404 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms