RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
SDHB-205ENST00000475506 HRO43593 1189 aa9.52□□□□□ -0.89
SDHB-205ENST00000475506 FOXD4L5Q5VV16 416 aaPredicted RBP9.52□□□□□ -0.89
SDHB-205ENST00000475506 FOXD4L4Q8WXT5 416 aaPredicted RBP9.52□□□□□ -0.89
SDHB-205ENST00000475506 PATL2C9JE40 543 aaKnown RBP9.51□□□□□ -0.89
SDHB-205ENST00000475506 ADGRD1Q6QNK2 874 aa9.51□□□□□ -0.89
SDHB-205ENST00000475506 ZMIZ1Q9ULJ6 1067 aa9.51□□□□□ -0.89
SDHB-205ENST00000475506 FAM174AQ8TBP5 190 aa9.5□□□□□ -0.89
SDHB-205ENST00000475506 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
SDHB-205ENST00000475506 JUNDP17535 347 aa9.49□□□□□ -0.89
SDHB-205ENST00000475506 BCAMP50895 628 aa9.49□□□□□ -0.89
SDHB-205ENST00000475506 LSM11P83369 360 aaKnown RBP eCLIP9.49□□□□□ -0.89
SDHB-205ENST00000475506 PTPRNQ16849 979 aa9.49□□□□□ -0.89
SDHB-205ENST00000475506 ZNF428Q96B54 188 aa9.49□□□□□ -0.89
SDHB-205ENST00000475506 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
SDHB-205ENST00000475506 PRR14Q9BWN1 585 aa9.49□□□□□ -0.89
SDHB-205ENST00000475506 USP17L3A6NCW0 530 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 USP17L4A6NCW7 530 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 USP17L1Q7RTZ2 530 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 NFATC2IPQ8NCF5 419 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 STK32AQ8WU08 396 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
SDHB-205ENST00000475506 SOWAHBA6NEL2 793 aa9.47□□□□□ -0.89
SDHB-205ENST00000475506 FMNL1O95466 1100 aaPredicted RBP9.47□□□□□ -0.89
SDHB-205ENST00000475506 PPP4CP60510 307 aa9.47□□□□□ -0.89
SDHB-205ENST00000475506 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
SDHB-205ENST00000475506 TMEM164Q5U3C3 297 aa9.47□□□□□ -0.89
SDHB-205ENST00000475506 DEPDC4Q8N2C3 294 aa9.47□□□□□ -0.89
SDHB-205ENST00000475506 ZC3H4Q9UPT8 1303 aaKnown RBP9.47□□□□□ -0.89
SDHB-205ENST00000475506 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
SDHB-205ENST00000475506 SKIP12755 728 aa9.46□□□□□ -0.9
SDHB-205ENST00000475506 FAM160A2Q8N612 972 aaPredicted RBP9.46□□□□□ -0.9
SDHB-205ENST00000475506 PCDHB3Q9Y5E6 796 aa9.46□□□□□ -0.9
SDHB-205ENST00000475506 NR1I2O75469 434 aa9.45□□□□□ -0.9
SDHB-205ENST00000475506 CTHP32929 405 aa9.45□□□□□ -0.9
SDHB-205ENST00000475506 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
SDHB-205ENST00000475506 ANKK1Q8NFD2 765 aa9.45□□□□□ -0.9
SDHB-205ENST00000475506 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
SDHB-205ENST00000475506 SLAIN2Q9P270 581 aa9.44□□□□□ -0.9
SDHB-205ENST00000475506 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
SDHB-205ENST00000475506 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
SDHB-205ENST00000475506 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
SDHB-205ENST00000475506 CRTC2Q53ET0 693 aaPredicted RBP9.43□□□□□ -0.9
SDHB-205ENST00000475506 LHX8Q68G74 356 aa9.43□□□□□ -0.9
SDHB-205ENST00000475506 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
SDHB-205ENST00000475506 PHTF2Q8N3S3 785 aa9.43□□□□□ -0.9
SDHB-205ENST00000475506 PRDM9Q9NQV7 894 aa9.43□□□□□ -0.9
SDHB-205ENST00000475506 EVA1BQ9NVM1 165 aa9.43□□□□□ -0.9
SDHB-205ENST00000475506 NOVA2Q9UNW9 492 aaKnown RBP9.43□□□□□ -0.9
SDHB-205ENST00000475506 CCNYL3P0C7X3 344 aa9.42□□□□□ -0.9
SDHB-205ENST00000475506 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
SDHB-205ENST00000475506 GNEQ9Y223 722 aaKnown RBP9.42□□□□□ -0.9
SDHB-205ENST00000475506 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
SDHB-205ENST00000475506 MKRN1Q9UHC7 482 aaKnown RBP9.41□□□□□ -0.9
SDHB-205ENST00000475506 USP17L15C9J2P7 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L12C9JPN9 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L11C9JVI0 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L21D6R901 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L18D6R9N7 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L22D6RA61 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L19D6RCP7 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L20D6RJB6 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 MMP16P51512 607 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 USP17L24Q0WX57 530 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 NCOA4Q13772 614 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 WBP1LQ9NX94 342 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 GPSM3Q9Y4H4 160 aa9.4□□□□□ -0.9
SDHB-205ENST00000475506 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 PTK2Q05397 1052 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 PTK7Q13308 1070 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 CCDC27Q2M243 656 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 WNT2BQ93097 391 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 SPSB2Q99619 263 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 CHIC2Q9UKJ5 165 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 PCDHB9Q9Y5E1 797 aa9.39□□□□□ -0.91
SDHB-205ENST00000475506 RBM25P49756 843 aaKnown RBP9.38□□□□□ -0.91
SDHB-205ENST00000475506 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
SDHB-205ENST00000475506 SLFNL1Q499Z3 407 aa9.37□□□□□ -0.91
SDHB-205ENST00000475506 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
SDHB-205ENST00000475506 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
SDHB-205ENST00000475506 RNF135Q8IUD6 432 aa9.37□□□□□ -0.91
SDHB-205ENST00000475506 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
SDHB-205ENST00000475506 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
SDHB-205ENST00000475506 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.91
SDHB-205ENST00000475506 FAM163AQ96GL9 167 aaPredicted RBP9.37□□□□□ -0.91
SDHB-205ENST00000475506 RASA1P20936 1047 aa9.36□□□□□ -0.91
SDHB-205ENST00000475506 SSFA2P28290 1259 aa9.36□□□□□ -0.91
SDHB-205ENST00000475506 COPS2P61201 443 aa9.36□□□□□ -0.91
SDHB-205ENST00000475506 PTCRAQ6ISU1 281 aaPredicted RBP9.36□□□□□ -0.91
SDHB-205ENST00000475506 TRAF7Q6Q0C0 670 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms