RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
SSPO-205ENST00000475488 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
SSPO-205ENST00000475488 NUCB2P80303 420 aa16.99■□□□□ 0.31
SSPO-205ENST00000475488 DEF6Q9H4E7 631 aa16.99■□□□□ 0.31
SSPO-205ENST00000475488 WDHD1O75717 1129 aaPredicted RBP16.99■□□□□ 0.31
SSPO-205ENST00000475488 STIM1Q13586 685 aa16.99■□□□□ 0.31
SSPO-205ENST00000475488 GNAI1P63096 354 aa16.99■□□□□ 0.31
SSPO-205ENST00000475488 ZNF76P36508 570 aa16.98■□□□□ 0.31
SSPO-205ENST00000475488 LUC7LQ9NQ29 371 aaKnown RBP16.98■□□□□ 0.31
SSPO-205ENST00000475488 SOGA3Q5TF21 947 aa16.98■□□□□ 0.31
SSPO-205ENST00000475488 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
SSPO-205ENST00000475488 EZRP15311 586 aaKnown RBP16.98■□□□□ 0.31
SSPO-205ENST00000475488 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
SSPO-205ENST00000475488 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
SSPO-205ENST00000475488 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
SSPO-205ENST00000475488 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
SSPO-205ENST00000475488 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
SSPO-205ENST00000475488 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
SSPO-205ENST00000475488 HIP1O00291 1037 aa16.96■□□□□ 0.31
SSPO-205ENST00000475488 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
SSPO-205ENST00000475488 APAF1O14727 1248 aa16.96■□□□□ 0.31
SSPO-205ENST00000475488 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
SSPO-205ENST00000475488 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
SSPO-205ENST00000475488 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.31
SSPO-205ENST00000475488 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
SSPO-205ENST00000475488 AXDND1Q5T1B0 1012 aaPredicted RBP16.96■□□□□ 0.31
SSPO-205ENST00000475488 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
SSPO-205ENST00000475488 CABP4P57796 275 aa16.95■□□□□ 0.3
SSPO-205ENST00000475488 TSPYL1Q9H0U9 437 aa16.95■□□□□ 0.3
SSPO-205ENST00000475488 NLRP6P59044 892 aa16.95■□□□□ 0.3
SSPO-205ENST00000475488 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
SSPO-205ENST00000475488 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
SSPO-205ENST00000475488 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
SSPO-205ENST00000475488 ZNF396Q96N95 335 aaPredicted RBP16.95■□□□□ 0.3
SSPO-205ENST00000475488 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
SSPO-205ENST00000475488 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
SSPO-205ENST00000475488 CCP110O43303 1012 aa16.94■□□□□ 0.3
SSPO-205ENST00000475488 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
SSPO-205ENST00000475488 PDE4AP27815 886 aa16.94■□□□□ 0.3
SSPO-205ENST00000475488 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
SSPO-205ENST00000475488 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.94■□□□□ 0.3
SSPO-205ENST00000475488 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
SSPO-205ENST00000475488 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
SSPO-205ENST00000475488 NACAP1Q9BZK3 213 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
SSPO-205ENST00000475488 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
SSPO-205ENST00000475488 TOM1L2Q6ZVM7 507 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 SCLT1Q96NL6 688 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 LETM1O95202 739 aaPredicted RBP16.93■□□□□ 0.3
SSPO-205ENST00000475488 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 TXLNBQ8N3L3 684 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 GSE1Q14687 1217 aa16.93■□□□□ 0.3
SSPO-205ENST00000475488 WDR70Q9NW82 654 aa16.92■□□□□ 0.3
SSPO-205ENST00000475488 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
SSPO-205ENST00000475488 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
SSPO-205ENST00000475488 TRIM5Q9C035 493 aa16.92■□□□□ 0.3
SSPO-205ENST00000475488 TAX1BP1Q86VP1 789 aa16.92■□□□□ 0.3
SSPO-205ENST00000475488 NUP133Q8WUM0 1156 aa16.91■□□□□ 0.3
SSPO-205ENST00000475488 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
SSPO-205ENST00000475488 DRC1Q96MC2 740 aa16.91■□□□□ 0.3
SSPO-205ENST00000475488 ANAPC15P60006 121 aa16.9■□□□□ 0.3
SSPO-205ENST00000475488 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
SSPO-205ENST00000475488 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
SSPO-205ENST00000475488 CENPHQ9H3R5 247 aa16.9■□□□□ 0.3
SSPO-205ENST00000475488 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSPO-205ENST00000475488 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
SSPO-205ENST00000475488 TMOD2Q9NZR1 351 aa16.9■□□□□ 0.3
SSPO-205ENST00000475488 SURF6O75683 361 aaKnown RBP16.89■□□□□ 0.3
SSPO-205ENST00000475488 PPFIBP1Q86W92 1011 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 DACH1Q9UI36 760 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 SERPINC1P01008 464 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 STK38Q15208 465 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 CCDC112Q8NEF3 446 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 ZNF428Q96B54 188 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 USP5P45974 858 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 TNIP1Q15025 636 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 CCDC39Q9UFE4 941 aa16.89■□□□□ 0.29
SSPO-205ENST00000475488 USP47Q96K76 1375 aa16.88■□□□□ 0.29
SSPO-205ENST00000475488 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
SSPO-205ENST00000475488 RABEP1Q15276 862 aa16.88■□□□□ 0.29
SSPO-205ENST00000475488 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
SSPO-205ENST00000475488 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
SSPO-205ENST00000475488 MYL6BP14649 208 aa16.87■□□□□ 0.29
SSPO-205ENST00000475488 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
SSPO-205ENST00000475488 CDC45O75419 566 aa16.87■□□□□ 0.29
SSPO-205ENST00000475488 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
SSPO-205ENST00000475488 NOL7Q9UMY1 257 aaKnown RBP16.87■□□□□ 0.29
SSPO-205ENST00000475488 ZSCAN25Q6NSZ9 544 aa16.87■□□□□ 0.29
SSPO-205ENST00000475488 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
SSPO-205ENST00000475488 HSP90AB3PQ58FF7 597 aa16.86■□□□□ 0.29
SSPO-205ENST00000475488 DHX37Q8IY37 1157 aaKnown RBP16.86■□□□□ 0.29
SSPO-205ENST00000475488 C22orf23Q9BZE7 217 aa16.86■□□□□ 0.29
SSPO-205ENST00000475488 PDCP20941 246 aa16.85■□□□□ 0.29
SSPO-205ENST00000475488 BICDL1Q6ZP65 573 aa16.85■□□□□ 0.29
SSPO-205ENST00000475488 SIL1Q9H173 461 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms