RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
TTC38-206ENST00000475467 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
TTC38-206ENST00000475467 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
TTC38-206ENST00000475467 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
TTC38-206ENST00000475467 PRR36Q9H6K5 1346 aa18.04■□□□□ 0.48
TTC38-206ENST00000475467 FAM98CQ17RN3 349 aaKnown RBP18.04■□□□□ 0.48
TTC38-206ENST00000475467 PRDM11Q9NQV5 511 aa18.04■□□□□ 0.48
TTC38-206ENST00000475467 NRAPQ86VF7 1730 aa18.03■□□□□ 0.48
TTC38-206ENST00000475467 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
TTC38-206ENST00000475467 ATP7BP35670 1465 aa18.02■□□□□ 0.48
TTC38-206ENST00000475467 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.48
TTC38-206ENST00000475467 NUDT16Q96DE0 195 aaKnown RBP18.02■□□□□ 0.48
TTC38-206ENST00000475467 PLEKHG5O94827 1062 aa18.01■□□□□ 0.47
TTC38-206ENST00000475467 CCDC61Q9Y6R9 512 aa18.01■□□□□ 0.47
TTC38-206ENST00000475467 DISP2A7MBM2 1401 aa18■□□□□ 0.47
TTC38-206ENST00000475467 LRP5O75197 1615 aa17.99■□□□□ 0.47
TTC38-206ENST00000475467 FAM196AQ6ZSG2 479 aa17.99■□□□□ 0.47
TTC38-206ENST00000475467 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
TTC38-206ENST00000475467 POLR3AO14802 1390 aaPredicted RBP17.98■□□□□ 0.47
TTC38-206ENST00000475467 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
TTC38-206ENST00000475467 RGPD1P0DJD0 1748 aa17.98■□□□□ 0.47
TTC38-206ENST00000475467 PARD3Q8TEW0 1356 aa17.97■□□□□ 0.47
TTC38-206ENST00000475467 PLEKHG3A1L390 1219 aa17.97■□□□□ 0.47
TTC38-206ENST00000475467 SPATA31A1Q5TZJ5 1347 aa17.97■□□□□ 0.47
TTC38-206ENST00000475467 CRYBG1Q9Y4K1 1723 aa17.96■□□□□ 0.47
TTC38-206ENST00000475467 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
TTC38-206ENST00000475467 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
TTC38-206ENST00000475467 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
TTC38-206ENST00000475467 NBPF8Q3BBV2 869 aa17.95■□□□□ 0.46
TTC38-206ENST00000475467 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
TTC38-206ENST00000475467 THSD7AQ9UPZ6 1657 aa17.95■□□□□ 0.46
TTC38-206ENST00000475467 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
TTC38-206ENST00000475467 EVA1CP58658 441 aa17.94■□□□□ 0.46
TTC38-206ENST00000475467 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
TTC38-206ENST00000475467 ACEP12821 1306 aa17.93■□□□□ 0.46
TTC38-206ENST00000475467 CPDO75976 1380 aa17.92■□□□□ 0.46
TTC38-206ENST00000475467 EN1Q05925 392 aaPredicted RBP17.92■□□□□ 0.46
TTC38-206ENST00000475467 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
TTC38-206ENST00000475467 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
TTC38-206ENST00000475467 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
TTC38-206ENST00000475467 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.45
TTC38-206ENST00000475467 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
TTC38-206ENST00000475467 STRN4Q9NRL3 753 aa17.89■□□□□ 0.45
TTC38-206ENST00000475467 PHRF1Q9P1Y6 1649 aaKnown RBP17.88■□□□□ 0.45
TTC38-206ENST00000475467 USP19O94966 1318 aa17.88■□□□□ 0.45
TTC38-206ENST00000475467 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
TTC38-206ENST00000475467 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
TTC38-206ENST00000475467 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
TTC38-206ENST00000475467 CHRNA2Q15822 529 aa17.87■□□□□ 0.45
TTC38-206ENST00000475467 CAMKK2Q96RR4 588 aa17.87■□□□□ 0.45
TTC38-206ENST00000475467 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
TTC38-206ENST00000475467 TRIM37O94972 964 aa17.85■□□□□ 0.45
TTC38-206ENST00000475467 GCP02774 474 aa17.85■□□□□ 0.45
TTC38-206ENST00000475467 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
TTC38-206ENST00000475467 NBPF14Q5TI25 921 aa17.85■□□□□ 0.45
TTC38-206ENST00000475467 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
TTC38-206ENST00000475467 APBA3O96018 575 aa17.84■□□□□ 0.45
TTC38-206ENST00000475467 R3HDM1Q15032 1099 aaKnown RBP17.84■□□□□ 0.45
TTC38-206ENST00000475467 EZH2Q15910 746 aaKnown RBP17.84■□□□□ 0.45
TTC38-206ENST00000475467 FAM182BQ5T319 152 aa17.84■□□□□ 0.45
TTC38-206ENST00000475467 NUTM2GQ5VZR2 741 aa17.83■□□□□ 0.44
TTC38-206ENST00000475467 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
TTC38-206ENST00000475467 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
TTC38-206ENST00000475467 USP35Q9P2H5 1018 aa17.82■□□□□ 0.44
TTC38-206ENST00000475467 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
TTC38-206ENST00000475467 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
TTC38-206ENST00000475467 ZNF692Q9BU19 519 aaPredicted RBP17.81■□□□□ 0.44
TTC38-206ENST00000475467 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
TTC38-206ENST00000475467 LMO7Q8WWI1 1683 aa17.8■□□□□ 0.44
TTC38-206ENST00000475467 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
TTC38-206ENST00000475467 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
TTC38-206ENST00000475467 CRB1P82279 1406 aa17.8■□□□□ 0.44
TTC38-206ENST00000475467 EVC2Q86UK5 1308 aa17.78■□□□□ 0.44
TTC38-206ENST00000475467 COL5A2P05997 1499 aaPredicted RBP17.78■□□□□ 0.44
TTC38-206ENST00000475467 NLRP6P59044 892 aa17.78■□□□□ 0.44
TTC38-206ENST00000475467 USP6P35125 1406 aa17.78■□□□□ 0.44
TTC38-206ENST00000475467 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.44
TTC38-206ENST00000475467 CABP1Q9NZU7 370 aa17.77■□□□□ 0.44
TTC38-206ENST00000475467 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.44
TTC38-206ENST00000475467 PLSCR1O15162 318 aa17.76■□□□□ 0.43
TTC38-206ENST00000475467 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
TTC38-206ENST00000475467 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
TTC38-206ENST00000475467 OVOS2A0A0J9YW53 1432 aa17.75■□□□□ 0.43
TTC38-206ENST00000475467 OVOS2Q6IE36 1432 aa17.75■□□□□ 0.43
TTC38-206ENST00000475467 RREB1Q92766 1687 aa17.74■□□□□ 0.43
TTC38-206ENST00000475467 SLIT3O75094 1523 aa17.74■□□□□ 0.43
TTC38-206ENST00000475467 DDB1Q16531 1140 aa17.74■□□□□ 0.43
TTC38-206ENST00000475467 TTC21AQ8NDW8 1320 aa17.73■□□□□ 0.43
TTC38-206ENST00000475467 BCL9O00512 1426 aa17.73■□□□□ 0.43
TTC38-206ENST00000475467 DCAF8L1A6NGE4 600 aa17.73■□□□□ 0.43
TTC38-206ENST00000475467 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
TTC38-206ENST00000475467 SPON1Q9HCB6 807 aa17.72■□□□□ 0.43
TTC38-206ENST00000475467 WDR17Q8IZU2 1322 aa17.72■□□□□ 0.43
TTC38-206ENST00000475467 QRICH2Q9H0J4 1663 aa17.71■□□□□ 0.43
TTC38-206ENST00000475467 BCL11BQ9C0K0 894 aaPredicted RBP17.71■□□□□ 0.43
TTC38-206ENST00000475467 RGPD3A6NKT7 1758 aaPredicted RBP17.71■□□□□ 0.43
TTC38-206ENST00000475467 RGPD4Q7Z3J3 1758 aa17.71■□□□□ 0.43
TTC38-206ENST00000475467 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
TTC38-206ENST00000475467 KCNQ2O43526 872 aa17.69■□□□□ 0.42
TTC38-206ENST00000475467 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms