RNA–Protein interactions for RNA: ENST00000475335.5

SIKE1-208, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-208ENST00000475335 CDK12Q9NYV4 1490 aaPredicted RBP29.85■■■□□ 2.37
SIKE1-208ENST00000475335 CABP1Q9NZU7 370 aa29.84■■■□□ 2.37
SIKE1-208ENST00000475335 USP21Q9UK80 565 aa29.84■■■□□ 2.37
SIKE1-208ENST00000475335 PAK3O75914 559 aaPredicted RBP29.82■■■□□ 2.36
SIKE1-208ENST00000475335 RXRBP28702 533 aa29.82■■■□□ 2.36
SIKE1-208ENST00000475335 QTRT2Q9H974 415 aaKnown RBP29.82■■■□□ 2.36
SIKE1-208ENST00000475335 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.82■■■□□ 2.36
SIKE1-208ENST00000475335 USP6P35125 1406 aa29.81■■■□□ 2.36
SIKE1-208ENST00000475335 SSH2Q76I76 1423 aa29.81■■■□□ 2.36
SIKE1-208ENST00000475335 ATAD2Q6PL18 1390 aa29.81■■■□□ 2.36
SIKE1-208ENST00000475335 PLEKHG5O94827 1062 aa29.8■■■□□ 2.36
SIKE1-208ENST00000475335 TESK2Q96S53 571 aa29.8■■■□□ 2.36
SIKE1-208ENST00000475335 PHRF1Q9P1Y6 1649 aaKnown RBP29.79■■■□□ 2.36
SIKE1-208ENST00000475335 CCER1Q8TC90 406 aaPredicted RBP29.79■■■□□ 2.36
SIKE1-208ENST00000475335 RGS12O14924 1447 aa29.79■■■□□ 2.36
SIKE1-208ENST00000475335 PLCH1Q4KWH8 1693 aa29.79■■■□□ 2.36
SIKE1-208ENST00000475335 BRD4O60885 1362 aaPredicted RBP29.78■■■□□ 2.36
SIKE1-208ENST00000475335 RBM6P78332 1123 aaKnown RBP29.78■■■□□ 2.36
SIKE1-208ENST00000475335 HAP1P54257 671 aaPredicted RBP29.77■■■□□ 2.36
SIKE1-208ENST00000475335 TRPC5Q9UL62 973 aaPredicted RBP29.77■■■□□ 2.36
SIKE1-208ENST00000475335 ST20-MTHFSA0A0A6YYL1 179 aa29.76■■■□□ 2.35
SIKE1-208ENST00000475335 CPSF1Q10570 1443 aaKnown RBP29.76■■■□□ 2.35
SIKE1-208ENST00000475335 USP47Q96K76 1375 aa29.76■■■□□ 2.35
SIKE1-208ENST00000475335 NWD2Q9ULI1 1742 aa29.75■■■□□ 2.35
SIKE1-208ENST00000475335 AKAP12Q02952 1782 aa29.75■■■□□ 2.35
SIKE1-208ENST00000475335 USP19O94966 1318 aa29.74■■■□□ 2.35
SIKE1-208ENST00000475335 NRKQ7Z2Y5 1582 aa29.74■■■□□ 2.35
SIKE1-208ENST00000475335 FAM83GA6ND36 823 aa29.73■■■□□ 2.35
SIKE1-208ENST00000475335 UNC5CLQ8IV45 518 aa29.73■■■□□ 2.35
SIKE1-208ENST00000475335 CD163L1Q9NR16 1453 aa29.73■■■□□ 2.35
SIKE1-208ENST00000475335 NUTM2GQ5VZR2 741 aa29.72■■■□□ 2.35
SIKE1-208ENST00000475335 NRAPQ86VF7 1730 aa29.71■■■□□ 2.35
SIKE1-208ENST00000475335 PIK3C2AO00443 1686 aa29.71■■■□□ 2.35
SIKE1-208ENST00000475335 COL14A1Q05707 1796 aaKnown RBP29.71■■■□□ 2.35
SIKE1-208ENST00000475335 GLI3P10071 1580 aa29.69■■■□□ 2.34
SIKE1-208ENST00000475335 ABTB2Q8N961 1025 aa29.69■■■□□ 2.34
SIKE1-208ENST00000475335 PUS7Q96PZ0 661 aaKnown RBP29.69■■■□□ 2.34
SIKE1-208ENST00000475335 MON2Q7Z3U7 1717 aa29.68■■■□□ 2.34
SIKE1-208ENST00000475335 KIAA0232Q92628 1395 aa29.66■■■□□ 2.34
SIKE1-208ENST00000475335 SLIT3O75094 1523 aa29.66■■■□□ 2.34
SIKE1-208ENST00000475335 GJD4Q96KN9 370 aaPredicted RBP29.65■■■□□ 2.34
SIKE1-208ENST00000475335 ZNF692Q9BU19 519 aaPredicted RBP29.65■■■□□ 2.34
SIKE1-208ENST00000475335 TTC21BQ7Z4L5 1316 aa29.64■■■□□ 2.34
SIKE1-208ENST00000475335 VPS72Q15906 364 aa29.63■■■□□ 2.33
SIKE1-208ENST00000475335 CPDO75976 1380 aa29.63■■■□□ 2.33
SIKE1-208ENST00000475335 KTN1Q86UP2 1357 aaKnown RBP29.63■■■□□ 2.33
SIKE1-208ENST00000475335 NLRP13Q86W25 1043 aa29.61■■■□□ 2.33
SIKE1-208ENST00000475335 SLC12A5Q9H2X9 1139 aa29.61■■■□□ 2.33
SIKE1-208ENST00000475335 PRDM11Q9NQV5 511 aa29.61■■■□□ 2.33
SIKE1-208ENST00000475335 BTG4Q9NY30 223 aa29.61■■■□□ 2.33
SIKE1-208ENST00000475335 TTC21AQ8NDW8 1320 aa29.59■■■□□ 2.33
SIKE1-208ENST00000475335 LMO7Q8WWI1 1683 aa29.59■■■□□ 2.33
SIKE1-208ENST00000475335 A0A1W2PP64 1363 aa29.58■■■□□ 2.33
SIKE1-208ENST00000475335 SLC24A1O60721 1099 aa29.58■■■□□ 2.33
SIKE1-208ENST00000475335 GCP02774 474 aa29.58■■■□□ 2.33
SIKE1-208ENST00000475335 ZC3H6P61129 1189 aaKnown RBP29.58■■■□□ 2.33
SIKE1-208ENST00000475335 NINLQ9Y2I6 1382 aa29.58■■■□□ 2.33
SIKE1-208ENST00000475335 EP400Q96L91 3159 aa29.58■■■□□ 2.33
SIKE1-208ENST00000475335 CHRNA2Q15822 529 aa29.57■■■□□ 2.32
SIKE1-208ENST00000475335 NLRP6P59044 892 aa29.56■■■□□ 2.32
SIKE1-208ENST00000475335 TMC1Q8TDI8 760 aa29.56■■■□□ 2.32
SIKE1-208ENST00000475335 USP54Q70EL1 1684 aa29.56■■■□□ 2.32
SIKE1-208ENST00000475335 EDC4Q6P2E9 1401 aaKnown RBP29.54■■■□□ 2.32
SIKE1-208ENST00000475335 CAMTA1Q9Y6Y1 1673 aa29.53■■■□□ 2.32
SIKE1-208ENST00000475335 TMF1P82094 1093 aa29.53■■■□□ 2.32
SIKE1-208ENST00000475335 NFAT5O94916 1531 aa29.52■■■□□ 2.32
SIKE1-208ENST00000475335 USP31Q70CQ4 1352 aa29.52■■■□□ 2.32
SIKE1-208ENST00000475335 HDGFL2Q7Z4V5 671 aaPredicted RBP29.51■■■□□ 2.31
SIKE1-208ENST00000475335 ONECUT3O60422 494 aaPredicted RBP29.5■■■□□ 2.31
SIKE1-208ENST00000475335 UPF1Q92900 1129 aaKnown RBP eCLIP29.5■■■□□ 2.31
SIKE1-208ENST00000475335 TERF2IPQ9NYB0 399 aa29.5■■■□□ 2.31
SIKE1-208ENST00000475335 SPATA31A5Q5VU36 1347 aa29.49■■■□□ 2.31
SIKE1-208ENST00000475335 SPATA31A7Q8IWB4 1347 aa29.49■■■□□ 2.31
SIKE1-208ENST00000475335 ZRANB1Q9UGI0 708 aa29.48■■■□□ 2.31
SIKE1-208ENST00000475335 NME9Q86XW9 330 aa29.47■■■□□ 2.31
SIKE1-208ENST00000475335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.47■■■□□ 2.31
SIKE1-208ENST00000475335 ANKRD36BQ8N2N9 1353 aa29.47■■■□□ 2.31
SIKE1-208ENST00000475335 CCDC9Q9Y3X0 531 aaKnown RBP29.46■■■□□ 2.31
SIKE1-208ENST00000475335 AATKQ6ZMQ8 1374 aa29.46■■■□□ 2.31
SIKE1-208ENST00000475335 MYOM1P52179 1685 aa29.46■■■□□ 2.31
SIKE1-208ENST00000475335 COL18A1P39060 1754 aa29.46■■■□□ 2.31
SIKE1-208ENST00000475335 COL5A2P05997 1499 aaPredicted RBP29.45■■■□□ 2.31
SIKE1-208ENST00000475335 OVOS2A0A0J9YW53 1432 aa29.45■■■□□ 2.3
SIKE1-208ENST00000475335 OVOS2Q6IE36 1432 aa29.45■■■□□ 2.3
SIKE1-208ENST00000475335 THSD7AQ9UPZ6 1657 aa29.44■■■□□ 2.3
SIKE1-208ENST00000475335 SEPT12Q8IYM1 358 aa29.43■■■□□ 2.3
SIKE1-208ENST00000475335 BRWD3Q6RI45 1802 aa29.43■■■□□ 2.3
SIKE1-208ENST00000475335 SPATA31A1Q5TZJ5 1347 aa29.43■■■□□ 2.3
SIKE1-208ENST00000475335 CDCA8Q53HL2 280 aa29.41■■■□□ 2.3
SIKE1-208ENST00000475335 ARHGEF25Q86VW2 580 aa29.41■■■□□ 2.3
SIKE1-208ENST00000475335 KCNH5Q8NCM2 988 aa29.41■■■□□ 2.3
SIKE1-208ENST00000475335 FAM98CQ17RN3 349 aaKnown RBP29.4■■■□□ 2.3
SIKE1-208ENST00000475335 STRN4Q9NRL3 753 aa29.4■■■□□ 2.3
SIKE1-208ENST00000475335 HSPA5P11021 654 aaKnown RBP29.39■■■□□ 2.3
SIKE1-208ENST00000475335 ABCC6O95255 1503 aa29.39■■■□□ 2.3
SIKE1-208ENST00000475335 EIF4G2P78344 907 aaKnown RBP eCLIP29.38■■■□□ 2.29
SIKE1-208ENST00000475335 LARP1Q6PKG0 1096 aaKnown RBP29.38■■■□□ 2.29
SIKE1-208ENST00000475335 SOX12O15370 315 aa29.36■■■□□ 2.29
SIKE1-208ENST00000475335 AXIN2Q9Y2T1 843 aa29.36■■■□□ 2.29
SIKE1-208ENST00000475335 ZBTB7CA1YPR0 619 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms