RNA–Protein interactions for RNA: ENST00000475126.5

CSTF2-204, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 1,693 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-204ENST00000475126 NME9Q86XW9 330 aa16.21■□□□□ 0.19
CSTF2-204ENST00000475126 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
CSTF2-204ENST00000475126 PPP2R1AP30153 589 aa16.21■□□□□ 0.18
CSTF2-204ENST00000475126 TNNT2P45379 298 aaPredicted RBP16.21■□□□□ 0.18
CSTF2-204ENST00000475126 LTBP4Q8N2S1 1624 aa16.2■□□□□ 0.18
CSTF2-204ENST00000475126 TTC21BQ7Z4L5 1316 aa16.2■□□□□ 0.18
CSTF2-204ENST00000475126 NLRP13Q86W25 1043 aa16.2■□□□□ 0.18
CSTF2-204ENST00000475126 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
CSTF2-204ENST00000475126 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
CSTF2-204ENST00000475126 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
CSTF2-204ENST00000475126 FOXO3O43524 673 aa16.17■□□□□ 0.18
CSTF2-204ENST00000475126 XPCQ01831 940 aaPredicted RBP16.16■□□□□ 0.18
CSTF2-204ENST00000475126 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
CSTF2-204ENST00000475126 TTC21AQ8NDW8 1320 aa16.14■□□□□ 0.17
CSTF2-204ENST00000475126 OVOS2A0A0J9YW53 1432 aa16.14■□□□□ 0.17
CSTF2-204ENST00000475126 OVOS2Q6IE36 1432 aa16.14■□□□□ 0.17
CSTF2-204ENST00000475126 PSME1Q06323 249 aa16.14■□□□□ 0.17
CSTF2-204ENST00000475126 DDX17Q92841 729 aaKnown RBP16.14■□□□□ 0.17
CSTF2-204ENST00000475126 KIF1AQ12756 1690 aa16.13■□□□□ 0.17
CSTF2-204ENST00000475126 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
CSTF2-204ENST00000475126 FBLN1P23142 703 aa16.13■□□□□ 0.17
CSTF2-204ENST00000475126 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
CSTF2-204ENST00000475126 COG3Q96JB2 828 aa16.13■□□□□ 0.17
CSTF2-204ENST00000475126 ANKRD26Q9UPS8 1709 aa16.12■□□□□ 0.17
CSTF2-204ENST00000475126 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
CSTF2-204ENST00000475126 SLAIN2Q9P270 581 aa16.12■□□□□ 0.17
CSTF2-204ENST00000475126 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
CSTF2-204ENST00000475126 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
CSTF2-204ENST00000475126 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
CSTF2-204ENST00000475126 MTHFSP49914 203 aa16.1■□□□□ 0.17
CSTF2-204ENST00000475126 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
CSTF2-204ENST00000475126 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
CSTF2-204ENST00000475126 USP31Q70CQ4 1352 aa16.09■□□□□ 0.17
CSTF2-204ENST00000475126 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
CSTF2-204ENST00000475126 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
CSTF2-204ENST00000475126 SOX12O15370 315 aa16.08■□□□□ 0.16
CSTF2-204ENST00000475126 NLRP6P59044 892 aa16.08■□□□□ 0.16
CSTF2-204ENST00000475126 PXDNQ92626 1479 aa16.07■□□□□ 0.16
CSTF2-204ENST00000475126 TRPM3Q9HCF6 1732 aaPredicted RBP16.06■□□□□ 0.16
CSTF2-204ENST00000475126 RRS1Q15050 365 aaKnown RBP16.06■□□□□ 0.16
CSTF2-204ENST00000475126 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
CSTF2-204ENST00000475126 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
CSTF2-204ENST00000475126 AATKQ6ZMQ8 1374 aa16.06■□□□□ 0.16
CSTF2-204ENST00000475126 LMOD2Q6P5Q4 547 aa16.05■□□□□ 0.16
CSTF2-204ENST00000475126 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
CSTF2-204ENST00000475126 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
CSTF2-204ENST00000475126 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
CSTF2-204ENST00000475126 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
CSTF2-204ENST00000475126 MARF1Q9Y4F3 1742 aaKnown RBP16.03■□□□□ 0.16
CSTF2-204ENST00000475126 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
CSTF2-204ENST00000475126 CFAP53Q96M91 514 aa16.02■□□□□ 0.16
CSTF2-204ENST00000475126 SBNO1A3KN83 1393 aa16.02■□□□□ 0.16
CSTF2-204ENST00000475126 USP54Q70EL1 1684 aa16.02■□□□□ 0.16
CSTF2-204ENST00000475126 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
CSTF2-204ENST00000475126 PNPLA6Q8IY17 1366 aa16.01■□□□□ 0.15
CSTF2-204ENST00000475126 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
CSTF2-204ENST00000475126 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
CSTF2-204ENST00000475126 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
CSTF2-204ENST00000475126 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
CSTF2-204ENST00000475126 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
CSTF2-204ENST00000475126 ALS2Q96Q42 1657 aa16■□□□□ 0.15
CSTF2-204ENST00000475126 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
CSTF2-204ENST00000475126 SPATA31A3Q5VYP0 1347 aa16■□□□□ 0.15
CSTF2-204ENST00000475126 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
CSTF2-204ENST00000475126 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
CSTF2-204ENST00000475126 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
CSTF2-204ENST00000475126 USP19O94966 1318 aa15.99■□□□□ 0.15
CSTF2-204ENST00000475126 NFAT5O94916 1531 aa15.99■□□□□ 0.15
CSTF2-204ENST00000475126 SLIT3O75094 1523 aa15.98■□□□□ 0.15
CSTF2-204ENST00000475126 PEAK1Q9H792 1746 aa15.98■□□□□ 0.15
CSTF2-204ENST00000475126 ADRA2BP18089 450 aa15.98■□□□□ 0.15
CSTF2-204ENST00000475126 NHSL1Q5SYE7 1610 aa15.98■□□□□ 0.15
CSTF2-204ENST00000475126 INSRP06213 1382 aa15.97■□□□□ 0.15
CSTF2-204ENST00000475126 MED1Q15648 1581 aaPredicted RBP15.97■□□□□ 0.15
CSTF2-204ENST00000475126 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
CSTF2-204ENST00000475126 PIP4K2BP78356 416 aa15.96■□□□□ 0.15
CSTF2-204ENST00000475126 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
CSTF2-204ENST00000475126 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
CSTF2-204ENST00000475126 GCP02774 474 aa15.95■□□□□ 0.14
CSTF2-204ENST00000475126 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
CSTF2-204ENST00000475126 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
CSTF2-204ENST00000475126 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
CSTF2-204ENST00000475126 TOM1O60784 492 aa15.95■□□□□ 0.14
CSTF2-204ENST00000475126 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
CSTF2-204ENST00000475126 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
CSTF2-204ENST00000475126 FLT4P35916 1363 aa15.94■□□□□ 0.14
CSTF2-204ENST00000475126 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
CSTF2-204ENST00000475126 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
CSTF2-204ENST00000475126 CERKQ8TCT0 537 aa15.94■□□□□ 0.14
CSTF2-204ENST00000475126 IQSEC2Q5JU85 1478 aa15.94■□□□□ 0.14
CSTF2-204ENST00000475126 ZBTB7CA1YPR0 619 aa15.93■□□□□ 0.14
CSTF2-204ENST00000475126 U2AF1L5P0DN76 240 aaPredicted RBP15.93■□□□□ 0.14
CSTF2-204ENST00000475126 AMPHP49418 695 aa15.93■□□□□ 0.14
CSTF2-204ENST00000475126 U2AF1Q01081 240 aaKnown RBP eCLIP15.93■□□□□ 0.14
CSTF2-204ENST00000475126 IL13P35225 146 aa15.92■□□□□ 0.14
CSTF2-204ENST00000475126 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
CSTF2-204ENST00000475126 HOXC9P31274 260 aa15.92■□□□□ 0.14
CSTF2-204ENST00000475126 EIF4A2Q14240 407 aaKnown RBP15.92■□□□□ 0.14
CSTF2-204ENST00000475126 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
CSTF2-204ENST00000475126 PHRF1Q9P1Y6 1649 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms