RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 ATF3P18847 181 aa27.35■■□□□ 1.97
EDEM3-206ENST00000474725 NME9Q86XW9 330 aa27.35■■□□□ 1.97
EDEM3-206ENST00000474725 ANKRD26Q9UPS8 1709 aa27.35■■□□□ 1.97
EDEM3-206ENST00000474725 SCAF1Q9H7N4 1312 aaKnown RBP27.34■■□□□ 1.97
EDEM3-206ENST00000474725 NRKQ7Z2Y5 1582 aa27.34■■□□□ 1.97
EDEM3-206ENST00000474725 DCCP43146 1447 aa27.33■■□□□ 1.96
EDEM3-206ENST00000474725 SSH2Q76I76 1423 aa27.33■■□□□ 1.96
EDEM3-206ENST00000474725 MSH6P52701 1360 aa27.32■■□□□ 1.96
EDEM3-206ENST00000474725 ORAI2Q96SN7 254 aa27.31■■□□□ 1.96
EDEM3-206ENST00000474725 ZRANB1Q9UGI0 708 aa27.31■■□□□ 1.96
EDEM3-206ENST00000474725 C1orf167Q5SNV9 1468 aa27.3■■□□□ 1.96
EDEM3-206ENST00000474725 CADPS2Q86UW7 1296 aa27.29■■□□□ 1.96
EDEM3-206ENST00000474725 MST1RQ04912 1400 aa27.28■■□□□ 1.96
EDEM3-206ENST00000474725 TTC21AQ8NDW8 1320 aa27.26■■□□□ 1.95
EDEM3-206ENST00000474725 COG3Q96JB2 828 aa27.26■■□□□ 1.95
EDEM3-206ENST00000474725 MTHFSP49914 203 aa27.25■■□□□ 1.95
EDEM3-206ENST00000474725 PSME1Q06323 249 aa27.22■■□□□ 1.95
EDEM3-206ENST00000474725 FOXO3O43524 673 aa27.22■■□□□ 1.95
EDEM3-206ENST00000474725 FBLN1P23142 703 aa27.21■■□□□ 1.95
EDEM3-206ENST00000474725 KIF1AQ12756 1690 aa27.19■■□□□ 1.94
EDEM3-206ENST00000474725 OVOS2A0A0J9YW53 1432 aa27.19■■□□□ 1.94
EDEM3-206ENST00000474725 OVOS2Q6IE36 1432 aa27.19■■□□□ 1.94
EDEM3-206ENST00000474725 PAK3O75914 559 aaPredicted RBP27.19■■□□□ 1.94
EDEM3-206ENST00000474725 HNRNPUQ00839 825 aaKnown RBP eCLIP27.19■■□□□ 1.94
EDEM3-206ENST00000474725 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
EDEM3-206ENST00000474725 PIK3C2AO00443 1686 aa27.17■■□□□ 1.94
EDEM3-206ENST00000474725 USP31Q70CQ4 1352 aa27.16■■□□□ 1.94
EDEM3-206ENST00000474725 XPCQ01831 940 aaPredicted RBP27.16■■□□□ 1.94
EDEM3-206ENST00000474725 WDR43Q15061 677 aaKnown RBP eCLIP27.15■■□□□ 1.94
EDEM3-206ENST00000474725 CFAP53Q96M91 514 aa27.15■■□□□ 1.94
EDEM3-206ENST00000474725 POLKQ9UBT6 870 aa27.15■■□□□ 1.94
EDEM3-206ENST00000474725 ABTB2Q8N961 1025 aa27.14■■□□□ 1.94
EDEM3-206ENST00000474725 AATKQ6ZMQ8 1374 aa27.14■■□□□ 1.94
EDEM3-206ENST00000474725 LTBP4Q8N2S1 1624 aa27.14■■□□□ 1.93
EDEM3-206ENST00000474725 KRT28Q7Z3Y7 464 aa27.14■■□□□ 1.93
EDEM3-206ENST00000474725 ADAMTS8Q9UP79 889 aa27.14■■□□□ 1.93
EDEM3-206ENST00000474725 NLRP6P59044 892 aa27.13■■□□□ 1.93
EDEM3-206ENST00000474725 NUTM2GQ5VZR2 741 aa27.13■■□□□ 1.93
EDEM3-206ENST00000474725 SLAIN2Q9P270 581 aa27.12■■□□□ 1.93
EDEM3-206ENST00000474725 MAP2P11137 1827 aaKnown RBP27.11■■□□□ 1.93
EDEM3-206ENST00000474725 DDX17Q92841 729 aaKnown RBP27.1■■□□□ 1.93
EDEM3-206ENST00000474725 EMILIN1Q9Y6C2 1016 aa27.1■■□□□ 1.93
EDEM3-206ENST00000474725 PPM1GO15355 546 aaPredicted RBP27.1■■□□□ 1.93
EDEM3-206ENST00000474725 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
EDEM3-206ENST00000474725 BRINP3Q76B58 766 aa27.09■■□□□ 1.93
EDEM3-206ENST00000474725 SHPRHQ149N8 1683 aa27.08■■□□□ 1.93
EDEM3-206ENST00000474725 INSRP06213 1382 aa27.07■■□□□ 1.92
EDEM3-206ENST00000474725 PNPLA6Q8IY17 1366 aa27.07■■□□□ 1.92
EDEM3-206ENST00000474725 TRPM3Q9HCF6 1732 aaPredicted RBP27.07■■□□□ 1.92
EDEM3-206ENST00000474725 SOX12O15370 315 aa27.07■■□□□ 1.92
EDEM3-206ENST00000474725 COL3A1P02461 1466 aaPredicted RBP27.07■■□□□ 1.92
EDEM3-206ENST00000474725 MARF1Q9Y4F3 1742 aaKnown RBP27.07■■□□□ 1.92
EDEM3-206ENST00000474725 SMG6Q86US8 1419 aaKnown RBP27.06■■□□□ 1.92
EDEM3-206ENST00000474725 USP54Q70EL1 1684 aa27.06■■□□□ 1.92
EDEM3-206ENST00000474725 NPHP3Q7Z494 1330 aa27.06■■□□□ 1.92
EDEM3-206ENST00000474725 BLMP54132 1417 aaPredicted RBP27.05■■□□□ 1.92
EDEM3-206ENST00000474725 SENP3-EIF4A1A0A087X0R7 540 aa27.05■■□□□ 1.92
EDEM3-206ENST00000474725 GTF3C3Q9Y5Q9 886 aa27.03■■□□□ 1.92
EDEM3-206ENST00000474725 LMOD2Q6P5Q4 547 aa27.02■■□□□ 1.92
EDEM3-206ENST00000474725 CDK12Q9NYV4 1490 aaPredicted RBP27.01■■□□□ 1.91
EDEM3-206ENST00000474725 DIAPH1O60610 1272 aaKnown RBP27.01■■□□□ 1.91
EDEM3-206ENST00000474725 PXDNQ92626 1479 aa26.99■■□□□ 1.91
EDEM3-206ENST00000474725 ZBED9Q6R2W3 1325 aa26.99■■□□□ 1.91
EDEM3-206ENST00000474725 NUDCQ9Y266 331 aa26.99■■□□□ 1.91
EDEM3-206ENST00000474725 SBNO1A3KN83 1393 aa26.99■■□□□ 1.91
EDEM3-206ENST00000474725 MAP3K19Q56UN5 1328 aa26.99■■□□□ 1.91
EDEM3-206ENST00000474725 CCDC146Q8IYE0 955 aa26.98■■□□□ 1.91
EDEM3-206ENST00000474725 ALS2Q96Q42 1657 aa26.97■■□□□ 1.91
EDEM3-206ENST00000474725 PEAK1Q9H792 1746 aa26.96■■□□□ 1.91
EDEM3-206ENST00000474725 U2SURPO15042 1029 aaKnown RBP26.96■■□□□ 1.91
EDEM3-206ENST00000474725 U2AF1L5P0DN76 240 aaPredicted RBP26.96■■□□□ 1.91
EDEM3-206ENST00000474725 U2AF1Q01081 240 aaKnown RBP eCLIP26.96■■□□□ 1.91
EDEM3-206ENST00000474725 PLEKHG5O94827 1062 aa26.94■■□□□ 1.9
EDEM3-206ENST00000474725 IL13P35225 146 aa26.94■■□□□ 1.9
EDEM3-206ENST00000474725 KCNH5Q8NCM2 988 aa26.93■■□□□ 1.9
EDEM3-206ENST00000474725 SALL2Q9Y467 1007 aaPredicted RBP26.93■■□□□ 1.9
EDEM3-206ENST00000474725 TNS3Q68CZ2 1445 aa26.93■■□□□ 1.9
EDEM3-206ENST00000474725 SPATA31A3Q5VYP0 1347 aa26.93■■□□□ 1.9
EDEM3-206ENST00000474725 USP19O94966 1318 aa26.92■■□□□ 1.9
EDEM3-206ENST00000474725 SOS2Q07890 1332 aaPredicted RBP26.92■■□□□ 1.9
EDEM3-206ENST00000474725 AMPHP49418 695 aa26.92■■□□□ 1.9
EDEM3-206ENST00000474725 HSP90AB2PQ58FF8 381 aa26.92■■□□□ 1.9
EDEM3-206ENST00000474725 SLIT3O75094 1523 aa26.91■■□□□ 1.9
EDEM3-206ENST00000474725 NFAT5O94916 1531 aa26.91■■□□□ 1.9
EDEM3-206ENST00000474725 GCP02774 474 aa26.9■■□□□ 1.9
EDEM3-206ENST00000474725 FLT4P35916 1363 aa26.89■■□□□ 1.9
EDEM3-206ENST00000474725 EIF4A2Q14240 407 aaKnown RBP26.88■■□□□ 1.89
EDEM3-206ENST00000474725 RUNDC1Q96C34 613 aa26.88■■□□□ 1.89
EDEM3-206ENST00000474725 NHSL1Q5SYE7 1610 aa26.88■■□□□ 1.89
EDEM3-206ENST00000474725 APAF1O14727 1248 aa26.88■■□□□ 1.89
EDEM3-206ENST00000474725 MED1Q15648 1581 aaPredicted RBP26.87■■□□□ 1.89
EDEM3-206ENST00000474725 HOXC9P31274 260 aa26.86■■□□□ 1.89
EDEM3-206ENST00000474725 KIF24Q5T7B8 1368 aa26.86■■□□□ 1.89
EDEM3-206ENST00000474725 ARHGEF10O15013 1369 aa26.86■■□□□ 1.89
EDEM3-206ENST00000474725 LTN1O94822 1766 aa26.85■■□□□ 1.89
EDEM3-206ENST00000474725 ROBO1Q9Y6N7 1651 aa26.85■■□□□ 1.89
EDEM3-206ENST00000474725 ZBTB7CA1YPR0 619 aa26.83■■□□□ 1.89
EDEM3-206ENST00000474725 PLEKHF1Q96S99 279 aa26.83■■□□□ 1.89
EDEM3-206ENST00000474725 ARHGEF25Q86VW2 580 aa26.82■■□□□ 1.88
EDEM3-206ENST00000474725 CABLES1Q8TDN4 633 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms