RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TET3O43151 1660 aa23.17■■□□□ 1.3
ECHDC1-214ENST00000474289 MTHFSP49914 203 aa23.17■■□□□ 1.3
ECHDC1-214ENST00000474289 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
ECHDC1-214ENST00000474289 ZBTB40Q9NUA8 1239 aa23.17■■□□□ 1.3
ECHDC1-214ENST00000474289 BAG4O95429 457 aaKnown RBP23.17■■□□□ 1.3
ECHDC1-214ENST00000474289 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
ECHDC1-214ENST00000474289 DEPDC5O75140 1603 aa23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 MAP7D2Q96T17 732 aa23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 MAP3K4Q9Y6R4 1608 aa23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 TMEM57Q8N5G2 664 aa23.16■■□□□ 1.3
ECHDC1-214ENST00000474289 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
ECHDC1-214ENST00000474289 NCBP3Q53F19 620 aaKnown RBP23.15■■□□□ 1.3
ECHDC1-214ENST00000474289 HS1BP3Q53T59 392 aa23.15■■□□□ 1.3
ECHDC1-214ENST00000474289 ZNF445P59923 1031 aa23.14■■□□□ 1.3
ECHDC1-214ENST00000474289 CHD1LQ86WJ1 897 aa23.14■■□□□ 1.3
ECHDC1-214ENST00000474289 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.3
ECHDC1-214ENST00000474289 NOB1Q9ULX3 412 aaKnown RBP23.14■■□□□ 1.29
ECHDC1-214ENST00000474289 NOL7Q9UMY1 257 aaKnown RBP23.14■■□□□ 1.29
ECHDC1-214ENST00000474289 ADGRB2O60241 1585 aa23.13■■□□□ 1.29
ECHDC1-214ENST00000474289 CFAP74Q9C0B2 1584 aa23.13■■□□□ 1.29
ECHDC1-214ENST00000474289 ZNF500O60304 480 aaPredicted RBP23.13■■□□□ 1.29
ECHDC1-214ENST00000474289 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.13■■□□□ 1.29
ECHDC1-214ENST00000474289 CFAP53Q96M91 514 aa23.12■■□□□ 1.29
ECHDC1-214ENST00000474289 ARHGAP31Q2M1Z3 1444 aa23.12■■□□□ 1.29
ECHDC1-214ENST00000474289 KIF3BO15066 747 aa23.12■■□□□ 1.29
ECHDC1-214ENST00000474289 SBNO2Q9Y2G9 1366 aa23.11■■□□□ 1.29
ECHDC1-214ENST00000474289 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
ECHDC1-214ENST00000474289 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
ECHDC1-214ENST00000474289 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
ECHDC1-214ENST00000474289 PDLIM2Q96JY6 352 aa23.11■■□□□ 1.29
ECHDC1-214ENST00000474289 MYOM2P54296 1465 aa23.11■■□□□ 1.29
ECHDC1-214ENST00000474289 UQCRHLA0A096LP55 91 aa23.1■■□□□ 1.29
ECHDC1-214ENST00000474289 UQCRHP07919 91 aa23.1■■□□□ 1.29
ECHDC1-214ENST00000474289 SLC12A5Q9H2X9 1139 aa23.1■■□□□ 1.29
ECHDC1-214ENST00000474289 ADGRL1O94910 1474 aa23.1■■□□□ 1.29
ECHDC1-214ENST00000474289 MYO3AQ8NEV4 1616 aa23.1■■□□□ 1.29
ECHDC1-214ENST00000474289 ZSCAN23Q3MJ62 389 aa23.1■■□□□ 1.29
ECHDC1-214ENST00000474289 NOS1P29475 1434 aa23.09■■□□□ 1.29
ECHDC1-214ENST00000474289 CAVIN1Q6NZI2 390 aaKnown RBP23.09■■□□□ 1.29
ECHDC1-214ENST00000474289 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
ECHDC1-214ENST00000474289 VWDEQ8N2E2 1590 aa23.08■■□□□ 1.29
ECHDC1-214ENST00000474289 RBSNQ9H1K0 784 aa23.08■■□□□ 1.29
ECHDC1-214ENST00000474289 MCTP1Q6DN14 999 aa23.08■■□□□ 1.28
ECHDC1-214ENST00000474289 NCLP19338 710 aaKnown RBP23.06■■□□□ 1.28
ECHDC1-214ENST00000474289 PODXL2Q9NZ53 605 aa23.06■■□□□ 1.28
ECHDC1-214ENST00000474289 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
ECHDC1-214ENST00000474289 MROH2AA6NES4 1674 aa23.05■■□□□ 1.28
ECHDC1-214ENST00000474289 CD109Q6YHK3 1445 aa23.05■■□□□ 1.28
ECHDC1-214ENST00000474289 ABCC11Q96J66 1382 aa23.05■■□□□ 1.28
ECHDC1-214ENST00000474289 LMBRD1Q9NUN5 540 aa23.04■■□□□ 1.28
ECHDC1-214ENST00000474289 ZKSCAN5Q9Y2L8 839 aa23.04■■□□□ 1.28
ECHDC1-214ENST00000474289 USP32Q8NFA0 1604 aa23.04■■□□□ 1.28
ECHDC1-214ENST00000474289 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
ECHDC1-214ENST00000474289 KIF16BQ96L93 1317 aa23.04■■□□□ 1.28
ECHDC1-214ENST00000474289 IFT172Q9UG01 1749 aa23.04■■□□□ 1.28
ECHDC1-214ENST00000474289 PRIM1P49642 420 aaKnown RBP23.03■■□□□ 1.28
ECHDC1-214ENST00000474289 ANKRD45Q5TZF3 282 aa23.03■■□□□ 1.28
ECHDC1-214ENST00000474289 ATP7AQ04656 1500 aa23.03■■□□□ 1.28
ECHDC1-214ENST00000474289 KIF1BO60333 1816 aa23.03■■□□□ 1.28
ECHDC1-214ENST00000474289 TRIM35Q9UPQ4 493 aa23.03■■□□□ 1.28
ECHDC1-214ENST00000474289 DYNC1I1O14576 645 aa23.02■■□□□ 1.28
ECHDC1-214ENST00000474289 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.27
ECHDC1-214ENST00000474289 MTERF4Q7Z6M4 381 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-214ENST00000474289 SMAP1Q8IYB5 467 aaPredicted RBP23.01■■□□□ 1.27
ECHDC1-214ENST00000474289 ARID3AQ99856 593 aa23.01■■□□□ 1.27
ECHDC1-214ENST00000474289 IPO8O15397 1037 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-214ENST00000474289 CYP2E1P05181 493 aaPredicted RBP23.01■■□□□ 1.27
ECHDC1-214ENST00000474289 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
ECHDC1-214ENST00000474289 INO80Q9ULG1 1556 aaPredicted RBP23■■□□□ 1.27
ECHDC1-214ENST00000474289 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
ECHDC1-214ENST00000474289 NUCB2P80303 420 aa23■■□□□ 1.27
ECHDC1-214ENST00000474289 CSPP1Q1MSJ5 1256 aa23■■□□□ 1.27
ECHDC1-214ENST00000474289 NRXN1Q9ULB1 1477 aa23■■□□□ 1.27
ECHDC1-214ENST00000474289 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
ECHDC1-214ENST00000474289 PKP1Q13835 747 aa22.99■■□□□ 1.27
ECHDC1-214ENST00000474289 PLEKHF1Q96S99 279 aa22.99■■□□□ 1.27
ECHDC1-214ENST00000474289 GCC1Q96CN9 775 aa22.98■■□□□ 1.27
ECHDC1-214ENST00000474289 MCM5P33992 734 aa22.98■■□□□ 1.27
ECHDC1-214ENST00000474289 TMEM132EQ6IEE7 984 aa22.98■■□□□ 1.27
ECHDC1-214ENST00000474289 RBM27Q9P2N5 1060 aaKnown RBP22.97■■□□□ 1.27
ECHDC1-214ENST00000474289 MED14O60244 1454 aa22.97■■□□□ 1.27
ECHDC1-214ENST00000474289 ZC3H13Q5T200 1668 aaKnown RBP22.97■■□□□ 1.27
ECHDC1-214ENST00000474289 GPT2Q8TD30 523 aa22.97■■□□□ 1.27
ECHDC1-214ENST00000474289 QRICH2Q9H0J4 1663 aa22.96■■□□□ 1.27
ECHDC1-214ENST00000474289 CDC45O75419 566 aa22.96■■□□□ 1.27
ECHDC1-214ENST00000474289 RABEP1Q15276 862 aa22.96■■□□□ 1.27
ECHDC1-214ENST00000474289 SASS6Q6UVJ0 657 aa22.96■■□□□ 1.27
ECHDC1-214ENST00000474289 IL16Q14005 1332 aa22.95■■□□□ 1.27
ECHDC1-214ENST00000474289 PPRC1Q5VV67 1664 aaKnown RBP22.95■■□□□ 1.26
ECHDC1-214ENST00000474289 EFCAB6Q5THR3 1501 aa22.95■■□□□ 1.26
ECHDC1-214ENST00000474289 C1orf115Q9H7X2 142 aa22.95■■□□□ 1.26
ECHDC1-214ENST00000474289 UHRF1BP1LA0JNW5 1464 aa22.94■■□□□ 1.26
ECHDC1-214ENST00000474289 ARAP3Q8WWN8 1544 aa22.94■■□□□ 1.26
ECHDC1-214ENST00000474289 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
ECHDC1-214ENST00000474289 PRPF40AO75400 957 aaKnown RBP22.94■■□□□ 1.26
ECHDC1-214ENST00000474289 FANCAO15360 1455 aa22.94■■□□□ 1.26
ECHDC1-214ENST00000474289 ZBTB7BO15156 539 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms