RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 QRICH2Q9H0J4 1663 aa26.41■■□□□ 1.82
CCDC171-206ENST00000474193 POLR3AO14802 1390 aaPredicted RBP26.4■■□□□ 1.82
CCDC171-206ENST00000474193 CCDC9Q9Y3X0 531 aaKnown RBP26.39■■□□□ 1.82
CCDC171-206ENST00000474193 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.81
CCDC171-206ENST00000474193 PPIP5K1Q6PFW1 1433 aa26.39■■□□□ 1.81
CCDC171-206ENST00000474193 ABTB2Q8N961 1025 aa26.37■■□□□ 1.81
CCDC171-206ENST00000474193 SLIT2O94813 1529 aa26.37■■□□□ 1.81
CCDC171-206ENST00000474193 FAM83GA6ND36 823 aa26.36■■□□□ 1.81
CCDC171-206ENST00000474193 CABP1Q9NZU7 370 aa26.36■■□□□ 1.81
CCDC171-206ENST00000474193 RGS12O14924 1447 aa26.36■■□□□ 1.81
CCDC171-206ENST00000474193 ALS2Q96Q42 1657 aa26.35■■□□□ 1.81
CCDC171-206ENST00000474193 UPF1Q92900 1129 aaKnown RBP eCLIP26.35■■□□□ 1.81
CCDC171-206ENST00000474193 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.81
CCDC171-206ENST00000474193 VPS72Q15906 364 aa26.33■■□□□ 1.81
CCDC171-206ENST00000474193 NUTM2GQ5VZR2 741 aa26.33■■□□□ 1.81
CCDC171-206ENST00000474193 PRDM11Q9NQV5 511 aa26.33■■□□□ 1.81
CCDC171-206ENST00000474193 TOPAZ1Q8N9V7 1692 aa26.33■■□□□ 1.81
CCDC171-206ENST00000474193 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.32■■□□□ 1.8
CCDC171-206ENST00000474193 NLRP13Q86W25 1043 aa26.32■■□□□ 1.8
CCDC171-206ENST00000474193 ZNF692Q9BU19 519 aaPredicted RBP26.32■■□□□ 1.8
CCDC171-206ENST00000474193 BTG4Q9NY30 223 aa26.31■■□□□ 1.8
CCDC171-206ENST00000474193 ABCA3Q99758 1704 aa26.3■■□□□ 1.8
CCDC171-206ENST00000474193 ATAD2Q6PL18 1390 aa26.3■■□□□ 1.8
CCDC171-206ENST00000474193 SLC24A1O60721 1099 aa26.29■■□□□ 1.8
CCDC171-206ENST00000474193 RALGAPBQ86X10 1494 aa26.29■■□□□ 1.8
CCDC171-206ENST00000474193 NWD2Q9ULI1 1742 aa26.28■■□□□ 1.8
CCDC171-206ENST00000474193 ZC3H6P61129 1189 aaKnown RBP26.26■■□□□ 1.79
CCDC171-206ENST00000474193 SBNO2Q9Y2G9 1366 aa26.25■■□□□ 1.79
CCDC171-206ENST00000474193 TIMELESSQ9UNS1 1208 aa26.25■■□□□ 1.79
CCDC171-206ENST00000474193 COL14A1Q05707 1796 aaKnown RBP26.25■■□□□ 1.79
CCDC171-206ENST00000474193 PLCH1Q4KWH8 1693 aa26.25■■□□□ 1.79
CCDC171-206ENST00000474193 A0A0G2JS52 829 aa26.24■■□□□ 1.79
CCDC171-206ENST00000474193 NLRP6P59044 892 aa26.24■■□□□ 1.79
CCDC171-206ENST00000474193 MYT1Q01538 1121 aa26.24■■□□□ 1.79
CCDC171-206ENST00000474193 KIAA0232Q92628 1395 aa26.22■■□□□ 1.79
CCDC171-206ENST00000474193 EVA1CP58658 441 aa26.22■■□□□ 1.79
CCDC171-206ENST00000474193 USP6P35125 1406 aa26.22■■□□□ 1.79
CCDC171-206ENST00000474193 SEPT12Q8IYM1 358 aa26.21■■□□□ 1.79
CCDC171-206ENST00000474193 CHRNA2Q15822 529 aa26.2■■□□□ 1.78
CCDC171-206ENST00000474193 GCP02774 474 aa26.19■■□□□ 1.78
CCDC171-206ENST00000474193 CCDC125Q86Z20 511 aa26.19■■□□□ 1.78
CCDC171-206ENST00000474193 TMC1Q8TDI8 760 aa26.19■■□□□ 1.78
CCDC171-206ENST00000474193 ONECUT3O60422 494 aaPredicted RBP26.18■■□□□ 1.78
CCDC171-206ENST00000474193 GLI3P10071 1580 aa26.18■■□□□ 1.78
CCDC171-206ENST00000474193 STRN4Q9NRL3 753 aa26.17■■□□□ 1.78
CCDC171-206ENST00000474193 CRYBG1Q9Y4K1 1723 aa26.17■■□□□ 1.78
CCDC171-206ENST00000474193 USP19O94966 1318 aa26.16■■□□□ 1.78
CCDC171-206ENST00000474193 HDGFL2Q7Z4V5 671 aaPredicted RBP26.16■■□□□ 1.78
CCDC171-206ENST00000474193 PUS7Q96PZ0 661 aaKnown RBP26.16■■□□□ 1.78
CCDC171-206ENST00000474193 KTN1Q86UP2 1357 aaKnown RBP26.16■■□□□ 1.78
CCDC171-206ENST00000474193 TTC21AQ8NDW8 1320 aa26.15■■□□□ 1.78
CCDC171-206ENST00000474193 PHRF1Q9P1Y6 1649 aaKnown RBP26.15■■□□□ 1.78
CCDC171-206ENST00000474193 ST20-MTHFSA0A0A6YYL1 179 aa26.15■■□□□ 1.78
CCDC171-206ENST00000474193 FAM98CQ17RN3 349 aaKnown RBP26.15■■□□□ 1.78
CCDC171-206ENST00000474193 TTC21BQ7Z4L5 1316 aa26.14■■□□□ 1.78
CCDC171-206ENST00000474193 ZBTB7CA1YPR0 619 aa26.14■■□□□ 1.78
CCDC171-206ENST00000474193 SPATA31A5Q5VU36 1347 aa26.14■■□□□ 1.77
CCDC171-206ENST00000474193 SPATA31A7Q8IWB4 1347 aa26.14■■□□□ 1.77
CCDC171-206ENST00000474193 CPDO75976 1380 aa26.13■■□□□ 1.77
CCDC171-206ENST00000474193 KRT27Q7Z3Y8 459 aa26.13■■□□□ 1.77
CCDC171-206ENST00000474193 KCNH5Q8NCM2 988 aa26.13■■□□□ 1.77
CCDC171-206ENST00000474193 TERF2IPQ9NYB0 399 aa26.13■■□□□ 1.77
CCDC171-206ENST00000474193 SF3B2Q13435 895 aaKnown RBP26.11■■□□□ 1.77
CCDC171-206ENST00000474193 NRAPQ86VF7 1730 aa26.11■■□□□ 1.77
CCDC171-206ENST00000474193 CPSF1Q10570 1443 aaKnown RBP26.09■■□□□ 1.77
CCDC171-206ENST00000474193 SSH2Q76I76 1423 aa26.09■■□□□ 1.77
CCDC171-206ENST00000474193 SLC12A5Q9H2X9 1139 aa26.08■■□□□ 1.77
CCDC171-206ENST00000474193 TMF1P82094 1093 aa26.07■■□□□ 1.76
CCDC171-206ENST00000474193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.07■■□□□ 1.76
CCDC171-206ENST00000474193 USP35Q9P2H5 1018 aa26.07■■□□□ 1.76
CCDC171-206ENST00000474193 SPATA31A1Q5TZJ5 1347 aa26.07■■□□□ 1.76
CCDC171-206ENST00000474193 NRKQ7Z2Y5 1582 aa26.07■■□□□ 1.76
CCDC171-206ENST00000474193 AKAP12Q02952 1782 aa26.06■■□□□ 1.76
CCDC171-206ENST00000474193 CDCA8Q53HL2 280 aa26.05■■□□□ 1.76
CCDC171-206ENST00000474193 TESK2Q96S53 571 aa26.05■■□□□ 1.76
CCDC171-206ENST00000474193 USP47Q96K76 1375 aa26.04■■□□□ 1.76
CCDC171-206ENST00000474193 NINLQ9Y2I6 1382 aa26.04■■□□□ 1.76
CCDC171-206ENST00000474193 BRWD3Q6RI45 1802 aa26.03■■□□□ 1.76
CCDC171-206ENST00000474193 SOX12O15370 315 aa26.03■■□□□ 1.76
CCDC171-206ENST00000474193 LARP1Q6PKG0 1096 aaKnown RBP26.02■■□□□ 1.76
CCDC171-206ENST00000474193 AATKQ6ZMQ8 1374 aa26.02■■□□□ 1.76
CCDC171-206ENST00000474193 BLMP54132 1417 aaPredicted RBP26.01■■□□□ 1.75
CCDC171-206ENST00000474193 TCP11L2Q8N4U5 519 aa26.01■■□□□ 1.75
CCDC171-206ENST00000474193 THRAP3Q9Y2W1 955 aaKnown RBP26.01■■□□□ 1.75
CCDC171-206ENST00000474193 PIK3C2AO00443 1686 aa26■■□□□ 1.75
CCDC171-206ENST00000474193 CAMTA1Q9Y6Y1 1673 aa26■■□□□ 1.75
CCDC171-206ENST00000474193 SLIT3O75094 1523 aa26■■□□□ 1.75
CCDC171-206ENST00000474193 BARGINQ6ZT62 677 aa26■■□□□ 1.75
CCDC171-206ENST00000474193 PDE3BQ13370 1112 aa25.98■■□□□ 1.75
CCDC171-206ENST00000474193 ARHGEF25Q86VW2 580 aa25.98■■□□□ 1.75
CCDC171-206ENST00000474193 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
CCDC171-206ENST00000474193 TOM1L2Q6ZVM7 507 aa25.97■■□□□ 1.75
CCDC171-206ENST00000474193 MON2Q7Z3U7 1717 aa25.97■■□□□ 1.75
CCDC171-206ENST00000474193 NME9Q86XW9 330 aa25.96■■□□□ 1.75
CCDC171-206ENST00000474193 USP31Q70CQ4 1352 aa25.95■■□□□ 1.75
CCDC171-206ENST00000474193 CSB-PGBD3P0DP91 1061 aa25.95■■□□□ 1.74
CCDC171-206ENST00000474193 LMO7Q8WWI1 1683 aa25.95■■□□□ 1.74
CCDC171-206ENST00000474193 A0A1W2PP64 1363 aa25.95■■□□□ 1.74
CCDC171-206ENST00000474193 COL5A2P05997 1499 aaPredicted RBP25.94■■□□□ 1.74
CCDC171-206ENST00000474193 ZRANB1Q9UGI0 708 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms