RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 TRAK1Q9UPV9 953 aa29.88■■■□□ 2.37
APP-215ENST00000474136 COL14A1Q05707 1796 aaKnown RBP29.87■■■□□ 2.37
APP-215ENST00000474136 ADGRB2O60241 1585 aa29.87■■■□□ 2.37
APP-215ENST00000474136 ALS2Q96Q42 1657 aa29.86■■■□□ 2.37
APP-215ENST00000474136 ADGRB1O14514 1584 aa29.83■■■□□ 2.37
APP-215ENST00000474136 PAK3O75914 559 aaPredicted RBP29.82■■■□□ 2.36
APP-215ENST00000474136 EZH2Q15910 746 aaKnown RBP29.82■■■□□ 2.36
APP-215ENST00000474136 PRDM11Q9NQV5 511 aa29.82■■■□□ 2.36
APP-215ENST00000474136 RGPD1P0DJD0 1748 aa29.82■■■□□ 2.36
APP-215ENST00000474136 DISP2A7MBM2 1401 aa29.81■■■□□ 2.36
APP-215ENST00000474136 NGDNQ8NEJ9 315 aaKnown RBP29.8■■■□□ 2.36
APP-215ENST00000474136 THSD7AQ9UPZ6 1657 aa29.8■■■□□ 2.36
APP-215ENST00000474136 WASLO00401 505 aaPredicted RBP29.79■■■□□ 2.36
APP-215ENST00000474136 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
APP-215ENST00000474136 EIF3AQ14152 1382 aaKnown RBP29.78■■■□□ 2.36
APP-215ENST00000474136 SPATA31A1Q5TZJ5 1347 aa29.77■■■□□ 2.36
APP-215ENST00000474136 TRIM37O94972 964 aa29.76■■■□□ 2.36
APP-215ENST00000474136 CHRNA2Q15822 529 aa29.76■■■□□ 2.36
APP-215ENST00000474136 TNS1Q9HBL0 1735 aaKnown RBP29.76■■■□□ 2.35
APP-215ENST00000474136 CAMKK2Q96RR4 588 aa29.75■■■□□ 2.35
APP-215ENST00000474136 CRYBG1Q9Y4K1 1723 aa29.75■■■□□ 2.35
APP-215ENST00000474136 KIAA0232Q92628 1395 aa29.75■■■□□ 2.35
APP-215ENST00000474136 STRN4Q9NRL3 753 aa29.74■■■□□ 2.35
APP-215ENST00000474136 KDM2AQ9Y2K7 1162 aa29.74■■■□□ 2.35
APP-215ENST00000474136 FAM196AQ6ZSG2 479 aa29.71■■■□□ 2.35
APP-215ENST00000474136 APBA3O96018 575 aa29.7■■■□□ 2.34
APP-215ENST00000474136 ZC3H6P61129 1189 aaKnown RBP29.7■■■□□ 2.34
APP-215ENST00000474136 NUTM2GQ5VZR2 741 aa29.7■■■□□ 2.34
APP-215ENST00000474136 USP35Q9P2H5 1018 aa29.69■■■□□ 2.34
APP-215ENST00000474136 DCAF11Q8TEB1 546 aa29.68■■■□□ 2.34
APP-215ENST00000474136 NUDT16Q96DE0 195 aaKnown RBP29.68■■■□□ 2.34
APP-215ENST00000474136 ATP7BP35670 1465 aa29.65■■■□□ 2.34
APP-215ENST00000474136 PHRF1Q9P1Y6 1649 aaKnown RBP29.61■■■□□ 2.33
APP-215ENST00000474136 EVA1CP58658 441 aa29.61■■■□□ 2.33
APP-215ENST00000474136 RAB3GAP2Q9H2M9 1393 aa29.61■■■□□ 2.33
APP-215ENST00000474136 SSH2Q76I76 1423 aa29.6■■■□□ 2.33
APP-215ENST00000474136 PDE3BQ13370 1112 aa29.6■■■□□ 2.33
APP-215ENST00000474136 PARD3Q8TEW0 1356 aa29.6■■■□□ 2.33
APP-215ENST00000474136 LARP1Q6PKG0 1096 aaKnown RBP29.59■■■□□ 2.33
APP-215ENST00000474136 BARGINQ6ZT62 677 aa29.59■■■□□ 2.33
APP-215ENST00000474136 CDK19Q9BWU1 502 aa29.58■■■□□ 2.33
APP-215ENST00000474136 ACEP12821 1306 aa29.57■■■□□ 2.32
APP-215ENST00000474136 NBPF8Q3BBV2 869 aa29.56■■■□□ 2.32
APP-215ENST00000474136 CAMTA1Q9Y6Y1 1673 aa29.55■■■□□ 2.32
APP-215ENST00000474136 ITSN1Q15811 1721 aa29.54■■■□□ 2.32
APP-215ENST00000474136 TCP11L2Q8N4U5 519 aa29.54■■■□□ 2.32
APP-215ENST00000474136 ARHGEF28Q8N1W1 1705 aaKnown RBP29.54■■■□□ 2.32
APP-215ENST00000474136 POLR3AO14802 1390 aaPredicted RBP29.53■■■□□ 2.32
APP-215ENST00000474136 NBPF14Q5TI25 921 aa29.52■■■□□ 2.32
APP-215ENST00000474136 RREB1Q92766 1687 aa29.52■■■□□ 2.32
APP-215ENST00000474136 YY1P25490 414 aa29.51■■■□□ 2.32
APP-215ENST00000474136 ABTB2Q8N961 1025 aa29.51■■■□□ 2.32
APP-215ENST00000474136 NUP188Q5SRE5 1749 aa29.51■■■□□ 2.31
APP-215ENST00000474136 CCDC61Q9Y6R9 512 aa29.5■■■□□ 2.31
APP-215ENST00000474136 NRKQ7Z2Y5 1582 aa29.5■■■□□ 2.31
APP-215ENST00000474136 STAC3Q96MF2 364 aa29.49■■■□□ 2.31
APP-215ENST00000474136 PLEKHG3A1L390 1219 aa29.48■■■□□ 2.31
APP-215ENST00000474136 CPDO75976 1380 aa29.48■■■□□ 2.31
APP-215ENST00000474136 USP19O94966 1318 aa29.47■■■□□ 2.31
APP-215ENST00000474136 LMO7Q8WWI1 1683 aa29.46■■■□□ 2.31
APP-215ENST00000474136 TRIM26Q12899 539 aaPredicted RBP29.45■■■□□ 2.31
APP-215ENST00000474136 TOPAZ1Q8N9V7 1692 aa29.45■■■□□ 2.31
APP-215ENST00000474136 SPON1Q9HCB6 807 aa29.44■■■□□ 2.3
APP-215ENST00000474136 PPP1R1BQ9UD71 204 aaPredicted RBP29.44■■■□□ 2.3
APP-215ENST00000474136 THRAP3Q9Y2W1 955 aaKnown RBP29.44■■■□□ 2.3
APP-215ENST00000474136 KCNQ2O43526 872 aa29.43■■■□□ 2.3
APP-215ENST00000474136 GCP02774 474 aa29.43■■■□□ 2.3
APP-215ENST00000474136 NLRP13Q86W25 1043 aa29.41■■■□□ 2.3
APP-215ENST00000474136 COL5A2P05997 1499 aaPredicted RBP29.4■■■□□ 2.3
APP-215ENST00000474136 ZBTB7CA1YPR0 619 aa29.39■■■□□ 2.3
APP-215ENST00000474136 PARP4Q9UKK3 1724 aaKnown RBP29.36■■■□□ 2.29
APP-215ENST00000474136 CRB1P82279 1406 aa29.35■■■□□ 2.29
APP-215ENST00000474136 PPIP5K1Q6PFW1 1433 aa29.35■■■□□ 2.29
APP-215ENST00000474136 SRPK2P78362 688 aaKnown RBP29.35■■■□□ 2.29
APP-215ENST00000474136 NBPF1Q3BBV0 1214 aa29.35■■■□□ 2.29
APP-215ENST00000474136 PTF1AQ7RTS3 328 aa29.35■■■□□ 2.29
APP-215ENST00000474136 ANO8Q9HCE9 1232 aaPredicted RBP29.35■■■□□ 2.29
APP-215ENST00000474136 OVOS2A0A0G2JMS6 1433 aa29.34■■■□□ 2.29
APP-215ENST00000474136 OVOS2A0A0J9YW53 1432 aa29.34■■■□□ 2.29
APP-215ENST00000474136 OVOS2Q6IE36 1432 aa29.34■■■□□ 2.29
APP-215ENST00000474136 CABP2Q9NPB3 220 aa29.34■■■□□ 2.29
APP-215ENST00000474136 NINLQ9Y2I6 1382 aa29.34■■■□□ 2.29
APP-215ENST00000474136 C11orf95C9JLR9 678 aaPredicted RBP29.32■■■□□ 2.28
APP-215ENST00000474136 PEAK1Q9H792 1746 aa29.31■■■□□ 2.28
APP-215ENST00000474136 PLSCR1O15162 318 aa29.3■■■□□ 2.28
APP-215ENST00000474136 PDGFDQ9GZP0 370 aaPredicted RBP29.3■■■□□ 2.28
APP-215ENST00000474136 DCAF8L1A6NGE4 600 aa29.29■■■□□ 2.28
APP-215ENST00000474136 NLRP6P59044 892 aa29.29■■■□□ 2.28
APP-215ENST00000474136 DDB1Q16531 1140 aa29.29■■■□□ 2.28
APP-215ENST00000474136 AATKQ6ZMQ8 1374 aa29.28■■■□□ 2.28
APP-215ENST00000474136 TOM1L2Q6ZVM7 507 aa29.27■■■□□ 2.28
APP-215ENST00000474136 LRRC37A3O60309 1634 aa29.26■■■□□ 2.28
APP-215ENST00000474136 BCL11BQ9C0K0 894 aaPredicted RBP29.26■■■□□ 2.27
APP-215ENST00000474136 CABP1Q9NZU7 370 aa29.26■■■□□ 2.27
APP-215ENST00000474136 PROM2Q8N271 834 aa29.25■■■□□ 2.27
APP-215ENST00000474136 CENPJQ9HC77 1338 aaPredicted RBP29.25■■■□□ 2.27
APP-215ENST00000474136 MARCH10Q8NA82 808 aaPredicted RBP29.24■■■□□ 2.27
APP-215ENST00000474136 AXIN2Q9Y2T1 843 aa29.24■■■□□ 2.27
APP-215ENST00000474136 USP6P35125 1406 aa29.24■■■□□ 2.27
APP-215ENST00000474136 ZBTB7AO95365 584 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms