RNA–Protein interactions for RNA: ENST00000474106.5

SVIL-208, Transcript of supervillin, humanhuman

TSL 4

Gene SVIL, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-208ENST00000474106 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
SVIL-208ENST00000474106 USP6P35125 1406 aa16.16■□□□□ 0.18
SVIL-208ENST00000474106 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
SVIL-208ENST00000474106 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
SVIL-208ENST00000474106 NRKQ7Z2Y5 1582 aa16.15■□□□□ 0.18
SVIL-208ENST00000474106 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
SVIL-208ENST00000474106 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
SVIL-208ENST00000474106 PSME1Q06323 249 aa16.14■□□□□ 0.17
SVIL-208ENST00000474106 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
SVIL-208ENST00000474106 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
SVIL-208ENST00000474106 XPCQ01831 940 aaPredicted RBP16.13■□□□□ 0.17
SVIL-208ENST00000474106 COG3Q96JB2 828 aa16.13■□□□□ 0.17
SVIL-208ENST00000474106 MST1RQ04912 1400 aa16.12■□□□□ 0.17
SVIL-208ENST00000474106 DCCP43146 1447 aa16.11■□□□□ 0.17
SVIL-208ENST00000474106 FOXO3O43524 673 aa16.11■□□□□ 0.17
SVIL-208ENST00000474106 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
SVIL-208ENST00000474106 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
SVIL-208ENST00000474106 SOX12O15370 315 aa16.1■□□□□ 0.17
SVIL-208ENST00000474106 FBLN1P23142 703 aa16.1■□□□□ 0.17
SVIL-208ENST00000474106 KIF1AQ12756 1690 aa16.1■□□□□ 0.17
SVIL-208ENST00000474106 MTHFSP49914 203 aa16.09■□□□□ 0.17
SVIL-208ENST00000474106 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
SVIL-208ENST00000474106 TTC21AQ8NDW8 1320 aa16.09■□□□□ 0.17
SVIL-208ENST00000474106 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
SVIL-208ENST00000474106 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
SVIL-208ENST00000474106 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SVIL-208ENST00000474106 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
SVIL-208ENST00000474106 KRT28Q7Z3Y7 464 aa16.07■□□□□ 0.16
SVIL-208ENST00000474106 ABTB2Q8N961 1025 aa16.07■□□□□ 0.16
SVIL-208ENST00000474106 SSH2Q76I76 1423 aa16.07■□□□□ 0.16
SVIL-208ENST00000474106 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
SVIL-208ENST00000474106 NLRP6P59044 892 aa16.06■□□□□ 0.16
SVIL-208ENST00000474106 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
SVIL-208ENST00000474106 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
SVIL-208ENST00000474106 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
SVIL-208ENST00000474106 LTBP4Q8N2S1 1624 aa16.05■□□□□ 0.16
SVIL-208ENST00000474106 MAP2P11137 1827 aaKnown RBP16.04■□□□□ 0.16
SVIL-208ENST00000474106 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
SVIL-208ENST00000474106 SLAIN2Q9P270 581 aa16.04■□□□□ 0.16
SVIL-208ENST00000474106 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
SVIL-208ENST00000474106 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
SVIL-208ENST00000474106 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
SVIL-208ENST00000474106 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
SVIL-208ENST00000474106 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
SVIL-208ENST00000474106 CENPBP07199 599 aaPredicted RBP16.01■□□□□ 0.15
SVIL-208ENST00000474106 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
SVIL-208ENST00000474106 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
SVIL-208ENST00000474106 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
SVIL-208ENST00000474106 TRPM3Q9HCF6 1732 aaPredicted RBP16■□□□□ 0.15
SVIL-208ENST00000474106 ADAMTS8Q9UP79 889 aa16■□□□□ 0.15
SVIL-208ENST00000474106 USP31Q70CQ4 1352 aa16■□□□□ 0.15
SVIL-208ENST00000474106 MARF1Q9Y4F3 1742 aaKnown RBP15.99■□□□□ 0.15
SVIL-208ENST00000474106 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
SVIL-208ENST00000474106 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
SVIL-208ENST00000474106 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
SVIL-208ENST00000474106 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
SVIL-208ENST00000474106 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
SVIL-208ENST00000474106 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
SVIL-208ENST00000474106 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
SVIL-208ENST00000474106 AMPHP49418 695 aa15.95■□□□□ 0.14
SVIL-208ENST00000474106 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
SVIL-208ENST00000474106 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
SVIL-208ENST00000474106 PXDNQ92626 1479 aa15.95■□□□□ 0.14
SVIL-208ENST00000474106 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
SVIL-208ENST00000474106 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
SVIL-208ENST00000474106 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
SVIL-208ENST00000474106 ALS2Q96Q42 1657 aa15.94■□□□□ 0.14
SVIL-208ENST00000474106 PEAK1Q9H792 1746 aa15.94■□□□□ 0.14
SVIL-208ENST00000474106 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
SVIL-208ENST00000474106 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
SVIL-208ENST00000474106 ROBO1Q9Y6N7 1651 aa15.93■□□□□ 0.14
SVIL-208ENST00000474106 CDK12Q9NYV4 1490 aaPredicted RBP15.93■□□□□ 0.14
SVIL-208ENST00000474106 SBNO1A3KN83 1393 aa15.93■□□□□ 0.14
SVIL-208ENST00000474106 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
SVIL-208ENST00000474106 LTN1O94822 1766 aa15.92■□□□□ 0.14
SVIL-208ENST00000474106 BLMP54132 1417 aaPredicted RBP15.92■□□□□ 0.14
SVIL-208ENST00000474106 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
SVIL-208ENST00000474106 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
SVIL-208ENST00000474106 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
SVIL-208ENST00000474106 SPATA31A3Q5VYP0 1347 aa15.91■□□□□ 0.14
SVIL-208ENST00000474106 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
SVIL-208ENST00000474106 GCP02774 474 aa15.9■□□□□ 0.14
SVIL-208ENST00000474106 HSP90AB2PQ58FF8 381 aa15.9■□□□□ 0.14
SVIL-208ENST00000474106 LTV1Q96GA3 475 aaPredicted RBP15.9■□□□□ 0.14
SVIL-208ENST00000474106 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
SVIL-208ENST00000474106 TOM1O60784 492 aa15.89■□□□□ 0.13
SVIL-208ENST00000474106 HMOX1P09601 288 aa15.89■□□□□ 0.13
SVIL-208ENST00000474106 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
SVIL-208ENST00000474106 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
SVIL-208ENST00000474106 SOS2Q07890 1332 aaPredicted RBP15.89■□□□□ 0.13
SVIL-208ENST00000474106 SLIT3O75094 1523 aa15.89■□□□□ 0.13
SVIL-208ENST00000474106 FLT4P35916 1363 aa15.88■□□□□ 0.13
SVIL-208ENST00000474106 MED1Q15648 1581 aaPredicted RBP15.88■□□□□ 0.13
SVIL-208ENST00000474106 IL13P35225 146 aa15.88■□□□□ 0.13
SVIL-208ENST00000474106 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
SVIL-208ENST00000474106 USP19O94966 1318 aa15.88■□□□□ 0.13
SVIL-208ENST00000474106 NFAT5O94916 1531 aa15.88■□□□□ 0.13
SVIL-208ENST00000474106 ARHGEF10O15013 1369 aa15.87■□□□□ 0.13
SVIL-208ENST00000474106 PHRF1Q9P1Y6 1649 aaKnown RBP15.87■□□□□ 0.13
SVIL-208ENST00000474106 APAF1O14727 1248 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms