RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 FAM135BQ49AJ0 1406 aa10.58□□□□□ -0.72
CCDC93-207ENST00000474006 DIP2AQ14689 1571 aa10.57□□□□□ -0.72
CCDC93-207ENST00000474006 TMF1P82094 1093 aa10.57□□□□□ -0.72
CCDC93-207ENST00000474006 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
CCDC93-207ENST00000474006 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
CCDC93-207ENST00000474006 SOX12O15370 315 aa10.56□□□□□ -0.72
CCDC93-207ENST00000474006 C14orf37Q86TY3 774 aa10.56□□□□□ -0.72
CCDC93-207ENST00000474006 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
CCDC93-207ENST00000474006 IQGAP1P46940 1657 aa10.56□□□□□ -0.72
CCDC93-207ENST00000474006 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
CCDC93-207ENST00000474006 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
CCDC93-207ENST00000474006 POLR3GLQ9BT43 218 aa10.55□□□□□ -0.72
CCDC93-207ENST00000474006 C19orf44Q9H6X5 657 aa10.55□□□□□ -0.72
CCDC93-207ENST00000474006 EVC2Q86UK5 1308 aa10.55□□□□□ -0.72
CCDC93-207ENST00000474006 DLC1Q96QB1 1528 aa10.54□□□□□ -0.72
CCDC93-207ENST00000474006 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
CCDC93-207ENST00000474006 NLRP6P59044 892 aa10.54□□□□□ -0.72
CCDC93-207ENST00000474006 EFCAB3Q8N7B9 438 aa10.54□□□□□ -0.72
CCDC93-207ENST00000474006 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
CCDC93-207ENST00000474006 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
CCDC93-207ENST00000474006 LAMC1P11047 1609 aa10.54□□□□□ -0.72
CCDC93-207ENST00000474006 TMEM94Q12767 1356 aa10.53□□□□□ -0.72
CCDC93-207ENST00000474006 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
CCDC93-207ENST00000474006 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
CCDC93-207ENST00000474006 CDCA8Q53HL2 280 aa10.53□□□□□ -0.72
CCDC93-207ENST00000474006 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
CCDC93-207ENST00000474006 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
CCDC93-207ENST00000474006 WASHC2AQ641Q2 1341 aa10.53□□□□□ -0.72
CCDC93-207ENST00000474006 SETD1AO15047 1707 aaKnown RBP10.53□□□□□ -0.72
CCDC93-207ENST00000474006 SBNO2Q9Y2G9 1366 aa10.52□□□□□ -0.72
CCDC93-207ENST00000474006 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
CCDC93-207ENST00000474006 C19orf67A6NJJ6 358 aa10.52□□□□□ -0.73
CCDC93-207ENST00000474006 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
CCDC93-207ENST00000474006 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.73
CCDC93-207ENST00000474006 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
CCDC93-207ENST00000474006 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
CCDC93-207ENST00000474006 NUDT16Q96DE0 195 aaKnown RBP10.51□□□□□ -0.73
CCDC93-207ENST00000474006 NCOA3Q9Y6Q9 1424 aa10.5□□□□□ -0.73
CCDC93-207ENST00000474006 ATF3P18847 181 aa10.5□□□□□ -0.73
CCDC93-207ENST00000474006 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
CCDC93-207ENST00000474006 CPS1P31327 1500 aa10.49□□□□□ -0.73
CCDC93-207ENST00000474006 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
CCDC93-207ENST00000474006 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
CCDC93-207ENST00000474006 SLC12A5Q9H2X9 1139 aa10.49□□□□□ -0.73
CCDC93-207ENST00000474006 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
CCDC93-207ENST00000474006 PHF8Q9UPP1 1060 aa10.49□□□□□ -0.73
CCDC93-207ENST00000474006 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
CCDC93-207ENST00000474006 LRRC7Q96NW7 1537 aa10.48□□□□□ -0.73
CCDC93-207ENST00000474006 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
CCDC93-207ENST00000474006 CHD2O14647 1828 aaKnown RBP10.47□□□□□ -0.73
CCDC93-207ENST00000474006 PRR36Q9H6K5 1346 aa10.47□□□□□ -0.73
CCDC93-207ENST00000474006 MSH6P52701 1360 aa10.47□□□□□ -0.73
CCDC93-207ENST00000474006 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
CCDC93-207ENST00000474006 NWD1Q149M9 1564 aa10.47□□□□□ -0.73
CCDC93-207ENST00000474006 PPP1R37O75864 691 aa10.46□□□□□ -0.73
CCDC93-207ENST00000474006 ESCO1Q5FWF5 840 aa10.46□□□□□ -0.73
CCDC93-207ENST00000474006 PANK3Q9H999 370 aa10.46□□□□□ -0.73
CCDC93-207ENST00000474006 WDR70Q9NW82 654 aa10.46□□□□□ -0.73
CCDC93-207ENST00000474006 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
CCDC93-207ENST00000474006 ATAD2Q6PL18 1390 aa10.45□□□□□ -0.74
CCDC93-207ENST00000474006 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
CCDC93-207ENST00000474006 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
CCDC93-207ENST00000474006 MS4A3Q96HJ5 214 aa10.45□□□□□ -0.74
CCDC93-207ENST00000474006 ORAI2Q96SN7 254 aa10.45□□□□□ -0.74
CCDC93-207ENST00000474006 ARHGEF28Q8N1W1 1705 aaKnown RBP10.44□□□□□ -0.74
CCDC93-207ENST00000474006 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.44□□□□□ -0.74
CCDC93-207ENST00000474006 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
CCDC93-207ENST00000474006 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
CCDC93-207ENST00000474006 TMEM106CQ9BVX2 250 aa10.44□□□□□ -0.74
CCDC93-207ENST00000474006 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
CCDC93-207ENST00000474006 NGDNQ8NEJ9 315 aaKnown RBP10.43□□□□□ -0.74
CCDC93-207ENST00000474006 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
CCDC93-207ENST00000474006 STRCP1A6NGW2 1772 aa10.43□□□□□ -0.74
CCDC93-207ENST00000474006 KNDC1Q76NI1 1749 aa10.43□□□□□ -0.74
CCDC93-207ENST00000474006 ACEP12821 1306 aa10.42□□□□□ -0.74
CCDC93-207ENST00000474006 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
CCDC93-207ENST00000474006 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
CCDC93-207ENST00000474006 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
CCDC93-207ENST00000474006 FOXO3O43524 673 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 TOM1O60784 492 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 TIE1P35590 1138 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 PSME1Q06323 249 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 GOLGA2Q08379 1002 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 DCCP43146 1447 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 PPIP5K1Q6PFW1 1433 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 ANKARQ7Z5J8 1434 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 QRICH2Q9H0J4 1663 aa10.41□□□□□ -0.74
CCDC93-207ENST00000474006 UBAP1LF5GYI3 381 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 BRINP3Q76B58 766 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 TRPC6Q9Y210 931 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 KNSTRNQ9Y448 316 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 C1orf167Q5SNV9 1468 aa10.4□□□□□ -0.74
CCDC93-207ENST00000474006 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
CCDC93-207ENST00000474006 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
CCDC93-207ENST00000474006 MST1RQ04912 1400 aa10.39□□□□□ -0.75
CCDC93-207ENST00000474006 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
CCDC93-207ENST00000474006 ATP7BP35670 1465 aa10.38□□□□□ -0.75
CCDC93-207ENST00000474006 PIP4K2BP78356 416 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms