RNA–Protein interactions for RNA: ENST00000473950.5

SRSF11-211, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 5

Gene SRSF11, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-211ENST00000473950 USP21Q9UK80 565 aa34.12■■■■□ 3.05
SRSF11-211ENST00000473950 HAP1P54257 671 aaPredicted RBP34.11■■■■□ 3.05
SRSF11-211ENST00000473950 ATAD2Q6PL18 1390 aa34.1■■■■□ 3.05
SRSF11-211ENST00000473950 BCL9LQ86UU0 1499 aa34.09■■■■□ 3.05
SRSF11-211ENST00000473950 PLEKHG5O94827 1062 aa34.09■■■■□ 3.05
SRSF11-211ENST00000473950 RXRBP28702 533 aa34.09■■■■□ 3.05
SRSF11-211ENST00000473950 QTRT2Q9H974 415 aaKnown RBP34.09■■■■□ 3.05
SRSF11-211ENST00000473950 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.09■■■■□ 3.05
SRSF11-211ENST00000473950 SLIT2O94813 1529 aa34.09■■■■□ 3.05
SRSF11-211ENST00000473950 CDK12Q9NYV4 1490 aaPredicted RBP34.07■■■■□ 3.05
SRSF11-211ENST00000473950 BRD4O60885 1362 aaPredicted RBP34.07■■■■□ 3.04
SRSF11-211ENST00000473950 ATRNO75882 1429 aa34.06■■■■□ 3.04
SRSF11-211ENST00000473950 USP6P35125 1406 aa34.05■■■■□ 3.04
SRSF11-211ENST00000473950 TRPC5Q9UL62 973 aaPredicted RBP34.05■■■■□ 3.04
SRSF11-211ENST00000473950 PLCH1Q4KWH8 1693 aa34.05■■■■□ 3.04
SRSF11-211ENST00000473950 AKAP12Q02952 1782 aa34.05■■■■□ 3.04
SRSF11-211ENST00000473950 PHRF1Q9P1Y6 1649 aaKnown RBP34.04■■■■□ 3.04
SRSF11-211ENST00000473950 RBM6P78332 1123 aaKnown RBP34.04■■■■□ 3.04
SRSF11-211ENST00000473950 NWD2Q9ULI1 1742 aa34.04■■■■□ 3.04
SRSF11-211ENST00000473950 ST20-MTHFSA0A0A6YYL1 179 aa34.03■■■■□ 3.04
SRSF11-211ENST00000473950 TESK2Q96S53 571 aa34.03■■■■□ 3.04
SRSF11-211ENST00000473950 USP47Q96K76 1375 aa34.02■■■■□ 3.04
SRSF11-211ENST00000473950 UPF1Q92900 1129 aaKnown RBP eCLIP34.02■■■■□ 3.04
SRSF11-211ENST00000473950 SSH2Q76I76 1423 aa34.01■■■■□ 3.03
SRSF11-211ENST00000473950 UNC5CLQ8IV45 518 aa33.98■■■■□ 3.03
SRSF11-211ENST00000473950 ABTB2Q8N961 1025 aa33.98■■■■□ 3.03
SRSF11-211ENST00000473950 COL14A1Q05707 1796 aaKnown RBP33.98■■■■□ 3.03
SRSF11-211ENST00000473950 CPSF1Q10570 1443 aaKnown RBP33.97■■■■□ 3.03
SRSF11-211ENST00000473950 NUTM2GQ5VZR2 741 aa33.97■■■■□ 3.03
SRSF11-211ENST00000473950 PUS7Q96PZ0 661 aaKnown RBP33.97■■■■□ 3.03
SRSF11-211ENST00000473950 FAM83GA6ND36 823 aa33.96■■■■□ 3.03
SRSF11-211ENST00000473950 RGS12O14924 1447 aa33.96■■■■□ 3.03
SRSF11-211ENST00000473950 NRKQ7Z2Y5 1582 aa33.95■■■■□ 3.03
SRSF11-211ENST00000473950 ZNF692Q9BU19 519 aaPredicted RBP33.95■■■■□ 3.03
SRSF11-211ENST00000473950 USP19O94966 1318 aa33.95■■■■□ 3.03
SRSF11-211ENST00000473950 MON2Q7Z3U7 1717 aa33.95■■■■□ 3.03
SRSF11-211ENST00000473950 NRAPQ86VF7 1730 aa33.93■■■■□ 3.02
SRSF11-211ENST00000473950 SLC24A1O60721 1099 aa33.93■■■■□ 3.02
SRSF11-211ENST00000473950 PIK3C2AO00443 1686 aa33.93■■■■□ 3.02
SRSF11-211ENST00000473950 CD163L1Q9NR16 1453 aa33.91■■■■□ 3.02
SRSF11-211ENST00000473950 NLRP13Q86W25 1043 aa33.89■■■■□ 3.02
SRSF11-211ENST00000473950 GJD4Q96KN9 370 aaPredicted RBP33.89■■■■□ 3.02
SRSF11-211ENST00000473950 GLI3P10071 1580 aa33.89■■■■□ 3.02
SRSF11-211ENST00000473950 KTN1Q86UP2 1357 aaKnown RBP33.88■■■■□ 3.01
SRSF11-211ENST00000473950 KIAA0232Q92628 1395 aa33.88■■■■□ 3.01
SRSF11-211ENST00000473950 TTC21BQ7Z4L5 1316 aa33.87■■■■□ 3.01
SRSF11-211ENST00000473950 PRDM11Q9NQV5 511 aa33.87■■■■□ 3.01
SRSF11-211ENST00000473950 VPS72Q15906 364 aa33.86■■■■□ 3.01
SRSF11-211ENST00000473950 SLIT3O75094 1523 aa33.85■■■■□ 3.01
SRSF11-211ENST00000473950 TMC1Q8TDI8 760 aa33.85■■■■□ 3.01
SRSF11-211ENST00000473950 SLC12A5Q9H2X9 1139 aa33.85■■■■□ 3.01
SRSF11-211ENST00000473950 TTC21AQ8NDW8 1320 aa33.84■■■■□ 3.01
SRSF11-211ENST00000473950 BTG4Q9NY30 223 aa33.84■■■■□ 3.01
SRSF11-211ENST00000473950 NINLQ9Y2I6 1382 aa33.84■■■■□ 3.01
SRSF11-211ENST00000473950 NLRP6P59044 892 aa33.83■■■■□ 3.01
SRSF11-211ENST00000473950 CPDO75976 1380 aa33.83■■■■□ 3.01
SRSF11-211ENST00000473950 ZC3H6P61129 1189 aaKnown RBP33.82■■■■□ 3
SRSF11-211ENST00000473950 TMF1P82094 1093 aa33.82■■■■□ 3
SRSF11-211ENST00000473950 GCP02774 474 aa33.81■■■■□ 3
SRSF11-211ENST00000473950 CHRNA2Q15822 529 aa33.79■■■■□ 3
SRSF11-211ENST00000473950 HDGFL2Q7Z4V5 671 aaPredicted RBP33.79■■■■□ 3
SRSF11-211ENST00000473950 A0A1W2PP64 1363 aa33.79■■■■□ 3
SRSF11-211ENST00000473950 LMO7Q8WWI1 1683 aa33.78■■■■□ 3
SRSF11-211ENST00000473950 USP54Q70EL1 1684 aa33.77■■■■□ 3
SRSF11-211ENST00000473950 TERF2IPQ9NYB0 399 aa33.77■■■■□ 3
SRSF11-211ENST00000473950 EDC4Q6P2E9 1401 aaKnown RBP33.76■■■□□ 2.99
SRSF11-211ENST00000473950 CCDC9Q9Y3X0 531 aaKnown RBP33.73■■■□□ 2.99
SRSF11-211ENST00000473950 CAMTA1Q9Y6Y1 1673 aa33.72■■■□□ 2.99
SRSF11-211ENST00000473950 USP31Q70CQ4 1352 aa33.72■■■□□ 2.99
SRSF11-211ENST00000473950 CDCA8Q53HL2 280 aa33.71■■■□□ 2.99
SRSF11-211ENST00000473950 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.71■■■□□ 2.99
SRSF11-211ENST00000473950 SPATA31A5Q5VU36 1347 aa33.69■■■□□ 2.98
SRSF11-211ENST00000473950 SPATA31A7Q8IWB4 1347 aa33.69■■■□□ 2.98
SRSF11-211ENST00000473950 ANKRD36BQ8N2N9 1353 aa33.69■■■□□ 2.98
SRSF11-211ENST00000473950 ONECUT3O60422 494 aaPredicted RBP33.68■■■□□ 2.98
SRSF11-211ENST00000473950 NFAT5O94916 1531 aa33.68■■■□□ 2.98
SRSF11-211ENST00000473950 BRWD3Q6RI45 1802 aa33.67■■■□□ 2.98
SRSF11-211ENST00000473950 NME9Q86XW9 330 aa33.67■■■□□ 2.98
SRSF11-211ENST00000473950 KCNH5Q8NCM2 988 aa33.67■■■□□ 2.98
SRSF11-211ENST00000473950 COL18A1P39060 1754 aa33.67■■■□□ 2.98
SRSF11-211ENST00000473950 MYOM1P52179 1685 aa33.66■■■□□ 2.98
SRSF11-211ENST00000473950 AATKQ6ZMQ8 1374 aa33.65■■■□□ 2.98
SRSF11-211ENST00000473950 EIF4G2P78344 907 aaKnown RBP eCLIP33.65■■■□□ 2.98
SRSF11-211ENST00000473950 ZRANB1Q9UGI0 708 aa33.65■■■□□ 2.98
SRSF11-211ENST00000473950 SEPT12Q8IYM1 358 aa33.63■■■□□ 2.97
SRSF11-211ENST00000473950 STRN4Q9NRL3 753 aa33.63■■■□□ 2.97
SRSF11-211ENST00000473950 COL5A2P05997 1499 aaPredicted RBP33.63■■■□□ 2.97
SRSF11-211ENST00000473950 OVOS2A0A0J9YW53 1432 aa33.62■■■□□ 2.97
SRSF11-211ENST00000473950 OVOS2Q6IE36 1432 aa33.62■■■□□ 2.97
SRSF11-211ENST00000473950 SPATA31A1Q5TZJ5 1347 aa33.61■■■□□ 2.97
SRSF11-211ENST00000473950 HSPA5P11021 654 aaKnown RBP33.61■■■□□ 2.97
SRSF11-211ENST00000473950 ARHGEF25Q86VW2 580 aa33.61■■■□□ 2.97
SRSF11-211ENST00000473950 EP400Q96L91 3159 aa33.61■■■□□ 2.97
SRSF11-211ENST00000473950 FAM98CQ17RN3 349 aaKnown RBP33.6■■■□□ 2.97
SRSF11-211ENST00000473950 THSD7AQ9UPZ6 1657 aa33.6■■■□□ 2.97
SRSF11-211ENST00000473950 EVA1CP58658 441 aa33.59■■■□□ 2.97
SRSF11-211ENST00000473950 ZBTB7CA1YPR0 619 aa33.58■■■□□ 2.97
SRSF11-211ENST00000473950 SOX12O15370 315 aa33.58■■■□□ 2.97
SRSF11-211ENST00000473950 LARP1Q6PKG0 1096 aaKnown RBP33.57■■■□□ 2.96
SRSF11-211ENST00000473950 ABCC6O95255 1503 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms