RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
TRAF4-209ENST00000473421 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
TRAF4-209ENST00000473421 BAG6P46379 1132 aa18.74■□□□□ 0.59
TRAF4-209ENST00000473421 KDM2AQ9Y2K7 1162 aa18.73■□□□□ 0.59
TRAF4-209ENST00000473421 COL14A1Q05707 1796 aaKnown RBP18.73■□□□□ 0.59
TRAF4-209ENST00000473421 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
TRAF4-209ENST00000473421 THSD7AQ9UPZ6 1657 aa18.71■□□□□ 0.59
TRAF4-209ENST00000473421 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
TRAF4-209ENST00000473421 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
TRAF4-209ENST00000473421 GPRASP1Q5JY77 1395 aa18.7■□□□□ 0.58
TRAF4-209ENST00000473421 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
TRAF4-209ENST00000473421 EZH2Q15910 746 aaKnown RBP18.7■□□□□ 0.58
TRAF4-209ENST00000473421 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
TRAF4-209ENST00000473421 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
TRAF4-209ENST00000473421 NUTM2GQ5VZR2 741 aa18.68■□□□□ 0.58
TRAF4-209ENST00000473421 NGDNQ8NEJ9 315 aaKnown RBP18.68■□□□□ 0.58
TRAF4-209ENST00000473421 PRDM11Q9NQV5 511 aa18.68■□□□□ 0.58
TRAF4-209ENST00000473421 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
TRAF4-209ENST00000473421 RAB3GAP2Q9H2M9 1393 aa18.68■□□□□ 0.58
TRAF4-209ENST00000473421 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
TRAF4-209ENST00000473421 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
TRAF4-209ENST00000473421 TRIM37O94972 964 aa18.66■□□□□ 0.58
TRAF4-209ENST00000473421 SPATA31A1Q5TZJ5 1347 aa18.66■□□□□ 0.58
TRAF4-209ENST00000473421 ZC3H6P61129 1189 aaKnown RBP18.65■□□□□ 0.58
TRAF4-209ENST00000473421 CAMKK2Q96RR4 588 aa18.65■□□□□ 0.58
TRAF4-209ENST00000473421 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
TRAF4-209ENST00000473421 ATP7BP35670 1465 aa18.65■□□□□ 0.58
TRAF4-209ENST00000473421 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
TRAF4-209ENST00000473421 DISP2A7MBM2 1401 aa18.64■□□□□ 0.57
TRAF4-209ENST00000473421 USP35Q9P2H5 1018 aa18.63■□□□□ 0.57
TRAF4-209ENST00000473421 PHRF1Q9P1Y6 1649 aaKnown RBP18.62■□□□□ 0.57
TRAF4-209ENST00000473421 ARHGEF28Q8N1W1 1705 aaKnown RBP18.62■□□□□ 0.57
TRAF4-209ENST00000473421 CDK19Q9BWU1 502 aa18.6■□□□□ 0.57
TRAF4-209ENST00000473421 EIF3AQ14152 1382 aaKnown RBP18.59■□□□□ 0.57
TRAF4-209ENST00000473421 APBA3O96018 575 aa18.59■□□□□ 0.57
TRAF4-209ENST00000473421 CAMTA1Q9Y6Y1 1673 aa18.59■□□□□ 0.57
TRAF4-209ENST00000473421 ACEP12821 1306 aa18.58■□□□□ 0.57
TRAF4-209ENST00000473421 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
TRAF4-209ENST00000473421 FAM196AQ6ZSG2 479 aa18.58■□□□□ 0.56
TRAF4-209ENST00000473421 NBPF8Q3BBV2 869 aa18.57■□□□□ 0.56
TRAF4-209ENST00000473421 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
TRAF4-209ENST00000473421 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
TRAF4-209ENST00000473421 ITSN1Q15811 1721 aa18.55■□□□□ 0.56
TRAF4-209ENST00000473421 TOPAZ1Q8N9V7 1692 aa18.54■□□□□ 0.56
TRAF4-209ENST00000473421 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
TRAF4-209ENST00000473421 NRKQ7Z2Y5 1582 aa18.54■□□□□ 0.56
TRAF4-209ENST00000473421 EVA1CP58658 441 aa18.53■□□□□ 0.56
TRAF4-209ENST00000473421 NBPF1Q3BBV0 1214 aa18.53■□□□□ 0.56
TRAF4-209ENST00000473421 NUP188Q5SRE5 1749 aa18.53■□□□□ 0.56
TRAF4-209ENST00000473421 LMO7Q8WWI1 1683 aa18.53■□□□□ 0.56
TRAF4-209ENST00000473421 RREB1Q92766 1687 aa18.53■□□□□ 0.56
TRAF4-209ENST00000473421 PLEKHG3A1L390 1219 aa18.52■□□□□ 0.56
TRAF4-209ENST00000473421 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
TRAF4-209ENST00000473421 ABTB2Q8N961 1025 aa18.51■□□□□ 0.55
TRAF4-209ENST00000473421 CCDC61Q9Y6R9 512 aa18.51■□□□□ 0.55
TRAF4-209ENST00000473421 USP19O94966 1318 aa18.5■□□□□ 0.55
TRAF4-209ENST00000473421 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
TRAF4-209ENST00000473421 TCP11L2Q8N4U5 519 aa18.5■□□□□ 0.55
TRAF4-209ENST00000473421 CPDO75976 1380 aa18.48■□□□□ 0.55
TRAF4-209ENST00000473421 GCP02774 474 aa18.48■□□□□ 0.55
TRAF4-209ENST00000473421 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
TRAF4-209ENST00000473421 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
TRAF4-209ENST00000473421 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
TRAF4-209ENST00000473421 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.54
TRAF4-209ENST00000473421 PDGFDQ9GZP0 370 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-209ENST00000473421 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
TRAF4-209ENST00000473421 ZBTB7CA1YPR0 619 aa18.44■□□□□ 0.54
TRAF4-209ENST00000473421 PPIP5K1Q6PFW1 1433 aa18.43■□□□□ 0.54
TRAF4-209ENST00000473421 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
TRAF4-209ENST00000473421 PARP4Q9UKK3 1724 aaKnown RBP18.43■□□□□ 0.54
TRAF4-209ENST00000473421 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
TRAF4-209ENST00000473421 NLRP13Q86W25 1043 aa18.42■□□□□ 0.54
TRAF4-209ENST00000473421 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
TRAF4-209ENST00000473421 YY1P25490 414 aa18.41■□□□□ 0.54
TRAF4-209ENST00000473421 NBPF14Q5TI25 921 aa18.41■□□□□ 0.54
TRAF4-209ENST00000473421 CABP1Q9NZU7 370 aa18.41■□□□□ 0.54
TRAF4-209ENST00000473421 THRAP3Q9Y2W1 955 aaKnown RBP18.41■□□□□ 0.54
TRAF4-209ENST00000473421 SBF2Q86WG5 1849 aa18.4■□□□□ 0.54
TRAF4-209ENST00000473421 KCNQ2O43526 872 aa18.4■□□□□ 0.54
TRAF4-209ENST00000473421 PROM2Q8N271 834 aa18.4■□□□□ 0.54
TRAF4-209ENST00000473421 CRB1P82279 1406 aa18.4■□□□□ 0.54
TRAF4-209ENST00000473421 KIAA1210Q9ULL0 1709 aa18.39■□□□□ 0.53
TRAF4-209ENST00000473421 COL18A1P39060 1754 aa18.39■□□□□ 0.53
TRAF4-209ENST00000473421 LRRC37A3O60309 1634 aa18.38■□□□□ 0.53
TRAF4-209ENST00000473421 NLRP6P59044 892 aa18.38■□□□□ 0.53
TRAF4-209ENST00000473421 SPON1Q9HCB6 807 aa18.38■□□□□ 0.53
TRAF4-209ENST00000473421 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
TRAF4-209ENST00000473421 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
TRAF4-209ENST00000473421 AATKQ6ZMQ8 1374 aa18.37■□□□□ 0.53
TRAF4-209ENST00000473421 USP6P35125 1406 aa18.37■□□□□ 0.53
TRAF4-209ENST00000473421 SLIT3O75094 1523 aa18.36■□□□□ 0.53
TRAF4-209ENST00000473421 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
TRAF4-209ENST00000473421 OVOS2A0A0G2JMS6 1433 aa18.35■□□□□ 0.53
TRAF4-209ENST00000473421 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
TRAF4-209ENST00000473421 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
TRAF4-209ENST00000473421 PPP1R1BQ9UD71 204 aaPredicted RBP18.35■□□□□ 0.53
TRAF4-209ENST00000473421 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
TRAF4-209ENST00000473421 PLSCR1O15162 318 aa18.34■□□□□ 0.53
TRAF4-209ENST00000473421 DDB1Q16531 1140 aa18.34■□□□□ 0.53
TRAF4-209ENST00000473421 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms