RNA–Protein interactions for RNA: ENST00000473331.1

RUSC1-210, Transcript of RUN and SH3 domain containing 1, human

TSL 2

Gene RUSC1, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUSC1-210	ENST00000473331	MARF1	Q9Y4F3	1742 aa	Known RBP	33.27	■■■□□ 2.92
RUSC1-210	ENST00000473331	ABCA3	Q99758	1704 aa		33.25	■■■□□ 2.91
RUSC1-210	ENST00000473331	ST20-MTHFS	A0A0A6YYL1	179 aa		33.24	■■■□□ 2.91
RUSC1-210	ENST00000473331	USP21	Q9UK80	565 aa		33.24	■■■□□ 2.91
RUSC1-210	ENST00000473331	USP47	Q96K76	1375 aa		33.21	■■■□□ 2.91
RUSC1-210	ENST00000473331	TESK2	Q96S53	571 aa		33.21	■■■□□ 2.91
RUSC1-210	ENST00000473331	QTRT2	Q9H974	415 aa	Known RBP	33.21	■■■□□ 2.91
RUSC1-210	ENST00000473331	RXRB	P28702	533 aa		33.2	■■■□□ 2.91
RUSC1-210	ENST00000473331	BRD4	O60885	1362 aa	Predicted RBP	33.2	■■■□□ 2.9
RUSC1-210	ENST00000473331	USP6	P35125	1406 aa		33.19	■■■□□ 2.9
RUSC1-210	ENST00000473331	SLC24A1	O60721	1099 aa		33.16	■■■□□ 2.9
RUSC1-210	ENST00000473331	TRPC5	Q9UL62	973 aa	Predicted RBP	33.16	■■■□□ 2.9
RUSC1-210	ENST00000473331	BCL9L	Q86UU0	1499 aa		33.16	■■■□□ 2.9
RUSC1-210	ENST00000473331	SLIT2	O94813	1529 aa		33.16	■■■□□ 2.9
RUSC1-210	ENST00000473331	NUTM2G	Q5VZR2	741 aa		33.15	■■■□□ 2.9
RUSC1-210	ENST00000473331	ABTB2	Q8N961	1025 aa		33.15	■■■□□ 2.9
RUSC1-210	ENST00000473331	CRYBG1	Q9Y4K1	1723 aa		33.14	■■■□□ 2.9
RUSC1-210	ENST00000473331	RBM6	P78332	1123 aa	Known RBP	33.13	■■■□□ 2.89
RUSC1-210	ENST00000473331	PUS7	Q96PZ0	661 aa	Known RBP	33.13	■■■□□ 2.89
RUSC1-210	ENST00000473331	ZNF692	Q9BU19	519 aa	Predicted RBP	33.13	■■■□□ 2.89
RUSC1-210	ENST00000473331	ATRN	O75882	1429 aa		33.12	■■■□□ 2.89
RUSC1-210	ENST00000473331	SSH2	Q76I76	1423 aa		33.11	■■■□□ 2.89
RUSC1-210	ENST00000473331	CPSF1	Q10570	1443 aa	Known RBP	33.11	■■■□□ 2.89
RUSC1-210	ENST00000473331	UNC5CL	Q8IV45	518 aa		33.1	■■■□□ 2.89
RUSC1-210	ENST00000473331	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.1	■■■□□ 2.89
RUSC1-210	ENST00000473331	FAM83G	A6ND36	823 aa		33.09	■■■□□ 2.89
RUSC1-210	ENST00000473331	TMC1	Q8TDI8	760 aa		33.09	■■■□□ 2.89
RUSC1-210	ENST00000473331	AKAP12	Q02952	1782 aa		33.09	■■■□□ 2.89
RUSC1-210	ENST00000473331	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.08	■■■□□ 2.89
RUSC1-210	ENST00000473331	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.07	■■■□□ 2.88
RUSC1-210	ENST00000473331	NLRP13	Q86W25	1043 aa		33.07	■■■□□ 2.88
RUSC1-210	ENST00000473331	PLCH1	Q4KWH8	1693 aa		33.06	■■■□□ 2.88
RUSC1-210	ENST00000473331	KTN1	Q86UP2	1357 aa	Known RBP	33.06	■■■□□ 2.88
RUSC1-210	ENST00000473331	USP19	O94966	1318 aa		33.05	■■■□□ 2.88
RUSC1-210	ENST00000473331	TMF1	P82094	1093 aa		33.05	■■■□□ 2.88
RUSC1-210	ENST00000473331	TTC21B	Q7Z4L5	1316 aa		33.04	■■■□□ 2.88
RUSC1-210	ENST00000473331	SLC12A5	Q9H2X9	1139 aa		33.04	■■■□□ 2.88
RUSC1-210	ENST00000473331	NWD2	Q9ULI1	1742 aa		33.03	■■■□□ 2.88
RUSC1-210	ENST00000473331	PRDM11	Q9NQV5	511 aa		33.03	■■■□□ 2.88
RUSC1-210	ENST00000473331	CD163L1	Q9NR16	1453 aa		33.03	■■■□□ 2.88
RUSC1-210	ENST00000473331	COL14A1	Q05707	1796 aa	Known RBP	33.02	■■■□□ 2.88
RUSC1-210	ENST00000473331	RGS12	O14924	1447 aa		33.02	■■■□□ 2.88
RUSC1-210	ENST00000473331	KIAA0232	Q92628	1395 aa		33.01	■■■□□ 2.88
RUSC1-210	ENST00000473331	NINL	Q9Y2I6	1382 aa		33.01	■■■□□ 2.88
RUSC1-210	ENST00000473331	NLRP6	P59044	892 aa		33.01	■■■□□ 2.87
RUSC1-210	ENST00000473331	TTC21A	Q8NDW8	1320 aa		33.01	■■■□□ 2.87
RUSC1-210	ENST00000473331	NRK	Q7Z2Y5	1582 aa		33	■■■□□ 2.87
RUSC1-210	ENST00000473331	ZC3H6	P61129	1189 aa	Known RBP	33	■■■□□ 2.87
RUSC1-210	ENST00000473331	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33	■■■□□ 2.87
RUSC1-210	ENST00000473331	GJD4	Q96KN9	370 aa	Predicted RBP	33	■■■□□ 2.87
RUSC1-210	ENST00000473331	PIK3C2A	O00443	1686 aa		33	■■■□□ 2.87
RUSC1-210	ENST00000473331	MON2	Q7Z3U7	1717 aa		32.99	■■■□□ 2.87
RUSC1-210	ENST00000473331	BTG4	Q9NY30	223 aa		32.99	■■■□□ 2.87
RUSC1-210	ENST00000473331	TERF2IP	Q9NYB0	399 aa		32.98	■■■□□ 2.87
RUSC1-210	ENST00000473331	GC	P02774	474 aa		32.97	■■■□□ 2.87
RUSC1-210	ENST00000473331	VPS72	Q15906	364 aa		32.97	■■■□□ 2.87
RUSC1-210	ENST00000473331		A0A1W2PP64	1363 aa		32.96	■■■□□ 2.87
RUSC1-210	ENST00000473331	CDCA8	Q53HL2	280 aa		32.95	■■■□□ 2.87
RUSC1-210	ENST00000473331	SLIT3	O75094	1523 aa		32.95	■■■□□ 2.87
RUSC1-210	ENST00000473331	CPD	O75976	1380 aa		32.95	■■■□□ 2.86
RUSC1-210	ENST00000473331	NRAP	Q86VF7	1730 aa		32.94	■■■□□ 2.86
RUSC1-210	ENST00000473331	CHRNA2	Q15822	529 aa		32.94	■■■□□ 2.86
RUSC1-210	ENST00000473331	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.92	■■■□□ 2.86
RUSC1-210	ENST00000473331	EDC4	Q6P2E9	1401 aa	Known RBP	32.92	■■■□□ 2.86
RUSC1-210	ENST00000473331	GLI3	P10071	1580 aa		32.92	■■■□□ 2.86
RUSC1-210	ENST00000473331	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
RUSC1-210	ENST00000473331	CCDC9	Q9Y3X0	531 aa	Known RBP	32.91	■■■□□ 2.86
RUSC1-210	ENST00000473331	ANKRD36B	Q8N2N9	1353 aa		32.86	■■■□□ 2.85
RUSC1-210	ENST00000473331	HSPA5	P11021	654 aa	Known RBP	32.86	■■■□□ 2.85
RUSC1-210	ENST00000473331	NME9	Q86XW9	330 aa		32.86	■■■□□ 2.85
RUSC1-210	ENST00000473331	USP31	Q70CQ4	1352 aa		32.85	■■■□□ 2.85
RUSC1-210	ENST00000473331	KCNH5	Q8NCM2	988 aa		32.84	■■■□□ 2.85
RUSC1-210	ENST00000473331	ZRANB1	Q9UGI0	708 aa		32.83	■■■□□ 2.85
RUSC1-210	ENST00000473331	LMO7	Q8WWI1	1683 aa		32.82	■■■□□ 2.84
RUSC1-210	ENST00000473331	ZBTB7C	A1YPR0	619 aa		32.81	■■■□□ 2.84
RUSC1-210	ENST00000473331	STRN4	Q9NRL3	753 aa		32.81	■■■□□ 2.84
RUSC1-210	ENST00000473331	CAMTA1	Q9Y6Y1	1673 aa		32.81	■■■□□ 2.84
RUSC1-210	ENST00000473331	SPATA31A5	Q5VU36	1347 aa		32.8	■■■□□ 2.84
RUSC1-210	ENST00000473331	SPATA31A7	Q8IWB4	1347 aa		32.8	■■■□□ 2.84
RUSC1-210	ENST00000473331	SOX12	O15370	315 aa		32.8	■■■□□ 2.84
RUSC1-210	ENST00000473331	USP54	Q70EL1	1684 aa		32.8	■■■□□ 2.84
RUSC1-210	ENST00000473331	AATK	Q6ZMQ8	1374 aa		32.79	■■■□□ 2.84
RUSC1-210	ENST00000473331	EVA1C	P58658	441 aa		32.78	■■■□□ 2.84
RUSC1-210	ENST00000473331	NFAT5	O94916	1531 aa		32.77	■■■□□ 2.84
RUSC1-210	ENST00000473331	ONECUT3	O60422	494 aa	Predicted RBP	32.77	■■■□□ 2.84
RUSC1-210	ENST00000473331	ARHGEF25	Q86VW2	580 aa		32.77	■■■□□ 2.84
RUSC1-210	ENST00000473331	SEPT12	Q8IYM1	358 aa		32.76	■■■□□ 2.83
RUSC1-210	ENST00000473331	OVOS2	A0A0J9YW53	1432 aa		32.75	■■■□□ 2.83
RUSC1-210	ENST00000473331	OVOS2	Q6IE36	1432 aa		32.75	■■■□□ 2.83
RUSC1-210	ENST00000473331	MYOM1	P52179	1685 aa		32.75	■■■□□ 2.83
RUSC1-210	ENST00000473331	FAM98C	Q17RN3	349 aa	Known RBP	32.74	■■■□□ 2.83
RUSC1-210	ENST00000473331	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
RUSC1-210	ENST00000473331	SPATA31A1	Q5TZJ5	1347 aa		32.74	■■■□□ 2.83
RUSC1-210	ENST00000473331	COL5A2	P05997	1499 aa	Predicted RBP	32.74	■■■□□ 2.83
RUSC1-210	ENST00000473331	LARP1	Q6PKG0	1096 aa	Known RBP	32.72	■■■□□ 2.83
RUSC1-210	ENST00000473331	POLR3GL	Q9BT43	218 aa		32.71	■■■□□ 2.83
RUSC1-210	ENST00000473331	COL18A1	P39060	1754 aa		32.7	■■■□□ 2.83
RUSC1-210	ENST00000473331		A0A0G2JS52	829 aa		32.7	■■■□□ 2.83
RUSC1-210	ENST00000473331	MYT1	Q01538	1121 aa		32.7	■■■□□ 2.83
RUSC1-210	ENST00000473331	COG3	Q96JB2	828 aa		32.68	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 104 ms