RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 USP21Q9UK80 565 aa12.96□□□□□ -0.33
C1orf56-203ENST00000473308 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
C1orf56-203ENST00000473308 RXRBP28702 533 aa12.95□□□□□ -0.34
C1orf56-203ENST00000473308 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
C1orf56-203ENST00000473308 TESK2Q96S53 571 aa12.95□□□□□ -0.34
C1orf56-203ENST00000473308 ABCA3Q99758 1704 aa12.95□□□□□ -0.34
C1orf56-203ENST00000473308 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
C1orf56-203ENST00000473308 BCL9LQ86UU0 1499 aa12.94□□□□□ -0.34
C1orf56-203ENST00000473308 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
C1orf56-203ENST00000473308 SLIT2O94813 1529 aa12.93□□□□□ -0.34
C1orf56-203ENST00000473308 FAM83GA6ND36 823 aa12.93□□□□□ -0.34
C1orf56-203ENST00000473308 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
C1orf56-203ENST00000473308 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
C1orf56-203ENST00000473308 ATRNO75882 1429 aa12.93□□□□□ -0.34
C1orf56-203ENST00000473308 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
C1orf56-203ENST00000473308 USP6P35125 1406 aa12.92□□□□□ -0.34
C1orf56-203ENST00000473308 ABTB2Q8N961 1025 aa12.92□□□□□ -0.34
C1orf56-203ENST00000473308 CRYBG1Q9Y4K1 1723 aa12.92□□□□□ -0.34
C1orf56-203ENST00000473308 USP47Q96K76 1375 aa12.92□□□□□ -0.34
C1orf56-203ENST00000473308 SSH2Q76I76 1423 aa12.91□□□□□ -0.34
C1orf56-203ENST00000473308 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
C1orf56-203ENST00000473308 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
C1orf56-203ENST00000473308 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
C1orf56-203ENST00000473308 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
C1orf56-203ENST00000473308 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
C1orf56-203ENST00000473308 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
C1orf56-203ENST00000473308 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
C1orf56-203ENST00000473308 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
C1orf56-203ENST00000473308 USP19O94966 1318 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 SLC12A5Q9H2X9 1139 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 CD163L1Q9NR16 1453 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 PLCH1Q4KWH8 1693 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
C1orf56-203ENST00000473308 RGS12O14924 1447 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
C1orf56-203ENST00000473308 KTN1Q86UP2 1357 aaKnown RBP12.87□□□□□ -0.35
C1orf56-203ENST00000473308 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
C1orf56-203ENST00000473308 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
C1orf56-203ENST00000473308 PRDM11Q9NQV5 511 aa12.87□□□□□ -0.35
C1orf56-203ENST00000473308 NLRP6P59044 892 aa12.86□□□□□ -0.35
C1orf56-203ENST00000473308 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
C1orf56-203ENST00000473308 VPS72Q15906 364 aa12.86□□□□□ -0.35
C1orf56-203ENST00000473308 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
C1orf56-203ENST00000473308 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
C1orf56-203ENST00000473308 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
C1orf56-203ENST00000473308 GCP02774 474 aa12.85□□□□□ -0.35
C1orf56-203ENST00000473308 TMF1P82094 1093 aa12.85□□□□□ -0.35
C1orf56-203ENST00000473308 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
C1orf56-203ENST00000473308 PIK3C2AO00443 1686 aa12.85□□□□□ -0.35
C1orf56-203ENST00000473308 NRKQ7Z2Y5 1582 aa12.85□□□□□ -0.35
C1orf56-203ENST00000473308 CPDO75976 1380 aa12.84□□□□□ -0.35
C1orf56-203ENST00000473308 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
C1orf56-203ENST00000473308 GLI3P10071 1580 aa12.84□□□□□ -0.35
C1orf56-203ENST00000473308 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
C1orf56-203ENST00000473308 NRAPQ86VF7 1730 aa12.84□□□□□ -0.35
C1orf56-203ENST00000473308 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
C1orf56-203ENST00000473308 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
C1orf56-203ENST00000473308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
C1orf56-203ENST00000473308 TERF2IPQ9NYB0 399 aa12.83□□□□□ -0.36
C1orf56-203ENST00000473308 SLIT3O75094 1523 aa12.83□□□□□ -0.36
C1orf56-203ENST00000473308 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
C1orf56-203ENST00000473308 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
C1orf56-203ENST00000473308 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
C1orf56-203ENST00000473308 NME9Q86XW9 330 aa12.81□□□□□ -0.36
C1orf56-203ENST00000473308 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
C1orf56-203ENST00000473308 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
C1orf56-203ENST00000473308 EP400Q96L91 3159 aa12.81□□□□□ -0.36
C1orf56-203ENST00000473308 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
C1orf56-203ENST00000473308 HSPA5P11021 654 aaKnown RBP12.8□□□□□ -0.36
C1orf56-203ENST00000473308 EIF4G2P78344 907 aaKnown RBP eCLIP12.8□□□□□ -0.36
C1orf56-203ENST00000473308 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
C1orf56-203ENST00000473308 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
C1orf56-203ENST00000473308 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
C1orf56-203ENST00000473308 LMO7Q8WWI1 1683 aa12.8□□□□□ -0.36
C1orf56-203ENST00000473308 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
C1orf56-203ENST00000473308 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
C1orf56-203ENST00000473308 STRN4Q9NRL3 753 aa12.79□□□□□ -0.36
C1orf56-203ENST00000473308 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
C1orf56-203ENST00000473308 ARHGEF25Q86VW2 580 aa12.78□□□□□ -0.36
C1orf56-203ENST00000473308 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
C1orf56-203ENST00000473308 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
C1orf56-203ENST00000473308 NFAT5O94916 1531 aa12.78□□□□□ -0.36
C1orf56-203ENST00000473308 USP54Q70EL1 1684 aa12.77□□□□□ -0.36
C1orf56-203ENST00000473308 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
C1orf56-203ENST00000473308 SOX12O15370 315 aa12.77□□□□□ -0.37
C1orf56-203ENST00000473308 EVA1CP58658 441 aa12.77□□□□□ -0.37
C1orf56-203ENST00000473308 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
C1orf56-203ENST00000473308 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.37
C1orf56-203ENST00000473308 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
C1orf56-203ENST00000473308 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
C1orf56-203ENST00000473308 COL18A1P39060 1754 aa12.76□□□□□ -0.37
C1orf56-203ENST00000473308 OVOS2A0A0J9YW53 1432 aa12.75□□□□□ -0.37
C1orf56-203ENST00000473308 COL5A2P05997 1499 aaPredicted RBP12.75□□□□□ -0.37
C1orf56-203ENST00000473308 OVOS2Q6IE36 1432 aa12.75□□□□□ -0.37
C1orf56-203ENST00000473308 BRWD3Q6RI45 1802 aa12.75□□□□□ -0.37
C1orf56-203ENST00000473308 MYOM1P52179 1685 aa12.73□□□□□ -0.37
C1orf56-203ENST00000473308 KRT27Q7Z3Y8 459 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms