RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 GJD4Q96KN9 370 aaPredicted RBP6.72□□□□□ -1.33
CLCC1-208ENST00000473062 GDPD2Q9HCC8 539 aa6.72□□□□□ -1.33
CLCC1-208ENST00000473062 PRDM9Q9NQV7 894 aa6.72□□□□□ -1.33
CLCC1-208ENST00000473062 RPIAP49247 311 aa6.71□□□□□ -1.34
CLCC1-208ENST00000473062 PTK2Q05397 1052 aa6.71□□□□□ -1.34
CLCC1-208ENST00000473062 NR6A1Q15406 480 aa6.71□□□□□ -1.34
CLCC1-208ENST00000473062 NKX2-3Q8TAU0 364 aa6.71□□□□□ -1.34
CLCC1-208ENST00000473062 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
CLCC1-208ENST00000473062 HMX1Q9NP08 348 aaPredicted RBP6.71□□□□□ -1.34
CLCC1-208ENST00000473062 PLA2G2EQ9NZK7 142 aa6.71□□□□□ -1.34
CLCC1-208ENST00000473062 CD2BP2O95400 341 aaKnown RBP6.7□□□□□ -1.34
CLCC1-208ENST00000473062 EIF4G2P78344 907 aaKnown RBP eCLIP6.7□□□□□ -1.34
CLCC1-208ENST00000473062 PDXDC2PQ6P474 469 aa6.7□□□□□ -1.34
CLCC1-208ENST00000473062 UNC93B1Q9H1C4 597 aa6.7□□□□□ -1.34
CLCC1-208ENST00000473062 MAP10Q9P2G4 905 aa6.7□□□□□ -1.34
CLCC1-208ENST00000473062 TBC1D2BQ9UPU7 963 aa6.7□□□□□ -1.34
CLCC1-208ENST00000473062 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
CLCC1-208ENST00000473062 TRAK2O60296 914 aa6.69□□□□□ -1.34
CLCC1-208ENST00000473062 WNT7BP56706 349 aa6.69□□□□□ -1.34
CLCC1-208ENST00000473062 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
CLCC1-208ENST00000473062 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
CLCC1-208ENST00000473062 ZBBXA8MT70 800 aa6.68□□□□□ -1.34
CLCC1-208ENST00000473062 CLUAP1Q96AJ1 413 aa6.68□□□□□ -1.34
CLCC1-208ENST00000473062 CDV3Q9UKY7 258 aaKnown RBP6.68□□□□□ -1.34
CLCC1-208ENST00000473062 NR1H3Q13133 447 aa6.67□□□□□ -1.34
CLCC1-208ENST00000473062 AGERQ15109 404 aa6.67□□□□□ -1.34
CLCC1-208ENST00000473062 A0A0G2JS52 829 aa6.66□□□□□ -1.34
CLCC1-208ENST00000473062 RGS20O76081 388 aa6.66□□□□□ -1.34
CLCC1-208ENST00000473062 ZBTB33Q86T24 672 aa6.66□□□□□ -1.34
CLCC1-208ENST00000473062 CCDC125Q86Z20 511 aa6.66□□□□□ -1.34
CLCC1-208ENST00000473062 ARHGAP9Q9BRR9 750 aa6.66□□□□□ -1.34
CLCC1-208ENST00000473062 TRIM32Q13049 653 aa6.65□□□□□ -1.34
CLCC1-208ENST00000473062 SEMA3FQ13275 785 aa6.65□□□□□ -1.34
CLCC1-208ENST00000473062 ZNF511Q8NB15 262 aa6.65□□□□□ -1.34
CLCC1-208ENST00000473062 POM121Q96HA1 1249 aa6.65□□□□□ -1.34
CLCC1-208ENST00000473062 FNBP4Q8N3X1 1017 aaPredicted RBP6.64□□□□□ -1.35
CLCC1-208ENST00000473062 CCDC97Q96F63 343 aaPredicted RBP6.64□□□□□ -1.35
CLCC1-208ENST00000473062 V9GY48 417 aaPredicted RBP6.64□□□□□ -1.35
CLCC1-208ENST00000473062 VARSP26640 1264 aaKnown RBP6.63□□□□□ -1.35
CLCC1-208ENST00000473062 SLC19A1P41440 591 aa6.63□□□□□ -1.35
CLCC1-208ENST00000473062 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
CLCC1-208ENST00000473062 FAM174AQ8TBP5 190 aa6.63□□□□□ -1.35
CLCC1-208ENST00000473062 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
CLCC1-208ENST00000473062 SLC10A4Q96EP9 437 aa6.63□□□□□ -1.35
CLCC1-208ENST00000473062 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
CLCC1-208ENST00000473062 SH3BP5LQ7L8J4 393 aa6.62□□□□□ -1.35
CLCC1-208ENST00000473062 BAP1Q92560 729 aa6.62□□□□□ -1.35
CLCC1-208ENST00000473062 CALR3Q96L12 384 aaKnown RBP6.62□□□□□ -1.35
CLCC1-208ENST00000473062 PPEF1O14829 653 aaPredicted RBP6.61□□□□□ -1.35
CLCC1-208ENST00000473062 FBXO45P0C2W1 286 aa6.61□□□□□ -1.35
CLCC1-208ENST00000473062 IRF5Q13568 498 aa6.61□□□□□ -1.35
CLCC1-208ENST00000473062 RNF20Q5VTR2 975 aa6.61□□□□□ -1.35
CLCC1-208ENST00000473062 PTCRAQ6ISU1 281 aaPredicted RBP6.61□□□□□ -1.35
CLCC1-208ENST00000473062 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
CLCC1-208ENST00000473062 EHBP1Q8NDI1 1231 aa6.61□□□□□ -1.35
CLCC1-208ENST00000473062 MAGEB6P1A0A0J9YX57 407 aa6.6□□□□□ -1.35
CLCC1-208ENST00000473062 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
CLCC1-208ENST00000473062 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
CLCC1-208ENST00000473062 TRMT44Q8IYL2 757 aaKnown RBP6.6□□□□□ -1.35
CLCC1-208ENST00000473062 PCDHB9Q9Y5E1 797 aa6.6□□□□□ -1.35
CLCC1-208ENST00000473062 SH3BP2P78314 561 aa6.59□□□□□ -1.35
CLCC1-208ENST00000473062 ADAM32Q8TC27 787 aa6.59□□□□□ -1.35
CLCC1-208ENST00000473062 GLMNQ92990 594 aa6.59□□□□□ -1.35
CLCC1-208ENST00000473062 CARD14Q9BXL6 1004 aa6.59□□□□□ -1.35
CLCC1-208ENST00000473062 WNT7AO00755 349 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 GPR37L1O60883 481 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 SLFNL1Q499Z3 407 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 ZNF598Q86UK7 904 aaKnown RBP6.58□□□□□ -1.36
CLCC1-208ENST00000473062 SEPT12Q8IYM1 358 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 MPNDQ8N594 471 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 NFATC2IPQ8NCF5 419 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 C1QTNF2Q9BXJ5 285 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 ZNF777Q9ULD5 760 aaPredicted RBP6.58□□□□□ -1.36
CLCC1-208ENST00000473062 MAP4K5Q9Y4K4 846 aa6.58□□□□□ -1.36
CLCC1-208ENST00000473062 LZTS3O60299 673 aaPredicted RBP6.57□□□□□ -1.36
CLCC1-208ENST00000473062 RC3H1Q5TC82 1133 aaKnown RBP6.57□□□□□ -1.36
CLCC1-208ENST00000473062 SPRYD7Q5W111 196 aa6.57□□□□□ -1.36
CLCC1-208ENST00000473062 PRKD2Q9BZL6 878 aa6.57□□□□□ -1.36
CLCC1-208ENST00000473062 SUPT5HO00267 1087 aaKnown RBP6.56□□□□□ -1.36
CLCC1-208ENST00000473062 DHX9Q08211 1270 aaKnown RBP6.56□□□□□ -1.36
CLCC1-208ENST00000473062 ERFEQ4G0M1 354 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 ZNF697Q5TEC3 545 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 HDGFL1Q5TGJ6 251 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 LIAT1Q6ZQX7 453 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 ALG2Q9H553 416 aa6.56□□□□□ -1.36
CLCC1-208ENST00000473062 VASH1Q7L8A9 365 aaPredicted RBP6.55□□□□□ -1.36
CLCC1-208ENST00000473062 FOXJ1Q92949 421 aa6.55□□□□□ -1.36
CLCC1-208ENST00000473062 ESF1Q9H501 851 aaKnown RBP6.55□□□□□ -1.36
CLCC1-208ENST00000473062 MAP7D1Q3KQU3 841 aa6.54□□□□□ -1.36
CLCC1-208ENST00000473062 RNF135Q8IUD6 432 aa6.54□□□□□ -1.36
CLCC1-208ENST00000473062 POM121CA8CG34 1229 aa6.53□□□□□ -1.36
CLCC1-208ENST00000473062 NR5A1Q13285 461 aa6.53□□□□□ -1.36
CLCC1-208ENST00000473062 CDK15Q96Q40 435 aa6.53□□□□□ -1.36
CLCC1-208ENST00000473062 CEP126Q9P2H0 1117 aa6.53□□□□□ -1.36
CLCC1-208ENST00000473062 ADH1CP00326 375 aa6.52□□□□□ -1.37
CLCC1-208ENST00000473062 SKOR1P84550 965 aa6.52□□□□□ -1.37
CLCC1-208ENST00000473062 CYP4X1Q8N118 509 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms