RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
CDHR3-208ENST00000471910 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
CDHR3-208ENST00000471910 A0A0G2JS52 829 aa9.43□□□□□ -0.9
CDHR3-208ENST00000471910 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
CDHR3-208ENST00000471910 PTCRAQ6ISU1 281 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-208ENST00000471910 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
CDHR3-208ENST00000471910 CLUAP1Q96AJ1 413 aa9.43□□□□□ -0.9
CDHR3-208ENST00000471910 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
CDHR3-208ENST00000471910 POM121Q96HA1 1249 aa9.42□□□□□ -0.9
CDHR3-208ENST00000471910 CD2BP2O95400 341 aaKnown RBP9.41□□□□□ -0.9
CDHR3-208ENST00000471910 RPIAP49247 311 aa9.41□□□□□ -0.9
CDHR3-208ENST00000471910 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
CDHR3-208ENST00000471910 PTK2Q05397 1052 aa9.39□□□□□ -0.91
CDHR3-208ENST00000471910 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
CDHR3-208ENST00000471910 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
CDHR3-208ENST00000471910 BAP1Q92560 729 aa9.39□□□□□ -0.91
CDHR3-208ENST00000471910 SLC19A1P41440 591 aa9.38□□□□□ -0.91
CDHR3-208ENST00000471910 AGERQ15109 404 aa9.38□□□□□ -0.91
CDHR3-208ENST00000471910 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
CDHR3-208ENST00000471910 GPSM3Q9Y4H4 160 aa9.38□□□□□ -0.91
CDHR3-208ENST00000471910 TRIM32Q13049 653 aa9.37□□□□□ -0.91
CDHR3-208ENST00000471910 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
CDHR3-208ENST00000471910 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
CDHR3-208ENST00000471910 BPHLQ86WA6 291 aaPredicted RBP9.36□□□□□ -0.91
CDHR3-208ENST00000471910 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
CDHR3-208ENST00000471910 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
CDHR3-208ENST00000471910 TRAK2O60296 914 aa9.35□□□□□ -0.91
CDHR3-208ENST00000471910 WNT7BP56706 349 aa9.35□□□□□ -0.91
CDHR3-208ENST00000471910 NR1H3Q13133 447 aa9.34□□□□□ -0.91
CDHR3-208ENST00000471910 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
CDHR3-208ENST00000471910 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
CDHR3-208ENST00000471910 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
CDHR3-208ENST00000471910 ARHGAP9Q9BRR9 750 aa9.34□□□□□ -0.91
CDHR3-208ENST00000471910 SH3BP2P78314 561 aa9.33□□□□□ -0.92
CDHR3-208ENST00000471910 IRF5Q13568 498 aa9.33□□□□□ -0.92
CDHR3-208ENST00000471910 FNBP4Q8N3X1 1017 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-208ENST00000471910 V9GY48 417 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-208ENST00000471910 EIF4G2P78344 907 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDHR3-208ENST00000471910 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
CDHR3-208ENST00000471910 MCCD1P59942 119 aaPredicted RBP9.31□□□□□ -0.92
CDHR3-208ENST00000471910 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
CDHR3-208ENST00000471910 SPRYD7Q5W111 196 aa9.31□□□□□ -0.92
CDHR3-208ENST00000471910 SH3BP5LQ7L8J4 393 aa9.31□□□□□ -0.92
CDHR3-208ENST00000471910 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
CDHR3-208ENST00000471910 GPR37L1O60883 481 aa9.3□□□□□ -0.92
CDHR3-208ENST00000471910 RGS20O76081 388 aa9.3□□□□□ -0.92
CDHR3-208ENST00000471910 FBXO45P0C2W1 286 aa9.3□□□□□ -0.92
CDHR3-208ENST00000471910 SOX11P35716 441 aa9.3□□□□□ -0.92
CDHR3-208ENST00000471910 FOXJ1Q92949 421 aa9.3□□□□□ -0.92
CDHR3-208ENST00000471910 VARSP26640 1264 aaKnown RBP9.29□□□□□ -0.92
CDHR3-208ENST00000471910 ZNF598Q86UK7 904 aaKnown RBP9.29□□□□□ -0.92
CDHR3-208ENST00000471910 EHBP1Q8NDI1 1231 aa9.29□□□□□ -0.92
CDHR3-208ENST00000471910 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
CDHR3-208ENST00000471910 SKOR1P84550 965 aa9.28□□□□□ -0.92
CDHR3-208ENST00000471910 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
CDHR3-208ENST00000471910 RC3H1Q5TC82 1133 aaKnown RBP9.28□□□□□ -0.92
CDHR3-208ENST00000471910 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
CDHR3-208ENST00000471910 SH3RF1Q7Z6J0 888 aa9.28□□□□□ -0.92
CDHR3-208ENST00000471910 FAM174AQ8TBP5 190 aa9.28□□□□□ -0.92
CDHR3-208ENST00000471910 ADAM32Q8TC27 787 aa9.28□□□□□ -0.92
CDHR3-208ENST00000471910 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-208ENST00000471910 ZNF777Q9ULD5 760 aaPredicted RBP9.28□□□□□ -0.92
CDHR3-208ENST00000471910 DZIP3Q86Y13 1208 aaKnown RBP9.27□□□□□ -0.93
CDHR3-208ENST00000471910 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
CDHR3-208ENST00000471910 WNT7AO00755 349 aa9.25□□□□□ -0.93
CDHR3-208ENST00000471910 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
CDHR3-208ENST00000471910 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
CDHR3-208ENST00000471910 SUPT5HO00267 1087 aaKnown RBP9.24□□□□□ -0.93
CDHR3-208ENST00000471910 ERFEQ4G0M1 354 aa9.24□□□□□ -0.93
CDHR3-208ENST00000471910 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
CDHR3-208ENST00000471910 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
CDHR3-208ENST00000471910 OCSTAMPQ9BR26 566 aa9.24□□□□□ -0.93
CDHR3-208ENST00000471910 POM121CA8CG34 1229 aa9.23□□□□□ -0.93
CDHR3-208ENST00000471910 FOXC1Q12948 553 aa9.23□□□□□ -0.93
CDHR3-208ENST00000471910 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
CDHR3-208ENST00000471910 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
CDHR3-208ENST00000471910 MRGPRX2Q96LB1 330 aa9.22□□□□□ -0.93
CDHR3-208ENST00000471910 C1QTNF2Q9BXJ5 285 aa9.22□□□□□ -0.93
CDHR3-208ENST00000471910 NBPF20Q3BBV1 942 aa9.21□□□□□ -0.94
CDHR3-208ENST00000471910 GLMNQ92990 594 aa9.21□□□□□ -0.94
CDHR3-208ENST00000471910 ALG2Q9H553 416 aa9.21□□□□□ -0.94
CDHR3-208ENST00000471910 ARID5BQ14865 1188 aa9.2□□□□□ -0.94
CDHR3-208ENST00000471910 VASH1Q7L8A9 365 aaPredicted RBP9.2□□□□□ -0.94
CDHR3-208ENST00000471910 MPNDQ8N594 471 aa9.2□□□□□ -0.94
CDHR3-208ENST00000471910 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
CDHR3-208ENST00000471910 RNF20Q5VTR2 975 aa9.19□□□□□ -0.94
CDHR3-208ENST00000471910 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
CDHR3-208ENST00000471910 SIAH2O43255 324 aa9.18□□□□□ -0.94
CDHR3-208ENST00000471910 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
CDHR3-208ENST00000471910 CCDC125Q86Z20 511 aa9.18□□□□□ -0.94
CDHR3-208ENST00000471910 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
CDHR3-208ENST00000471910 SNIP1Q8TAD8 396 aaKnown RBP9.18□□□□□ -0.94
CDHR3-208ENST00000471910 MAP4K5Q9Y4K4 846 aa9.18□□□□□ -0.94
CDHR3-208ENST00000471910 TTC24A2A3L6 582 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-208ENST00000471910 TRIM52Q96A61 297 aa9.17□□□□□ -0.94
CDHR3-208ENST00000471910 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-208ENST00000471910 CDK15Q96Q40 435 aa9.17□□□□□ -0.94
CDHR3-208ENST00000471910 KCTD15Q96SI1 283 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-208ENST00000471910 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
CDHR3-208ENST00000471910 SERPINA10Q9UK55 444 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms