RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 COL14A1Q05707 1796 aaKnown RBP30.06■■■□□ 2.4
SREBF1-210ENST00000471445 UNC5CLQ8IV45 518 aa30.06■■■□□ 2.4
SREBF1-210ENST00000471445 UPF1Q92900 1129 aaKnown RBP eCLIP30.06■■■□□ 2.4
SREBF1-210ENST00000471445 PLEKHG3A1L390 1219 aa30.04■■■□□ 2.4
SREBF1-210ENST00000471445 PLEKHG5O94827 1062 aa30.04■■■□□ 2.4
SREBF1-210ENST00000471445 NBPF8Q3BBV2 869 aa30.04■■■□□ 2.4
SREBF1-210ENST00000471445 RALGAPBQ86X10 1494 aa30.04■■■□□ 2.4
SREBF1-210ENST00000471445 PPIP5K1Q6PFW1 1433 aa30.04■■■□□ 2.4
SREBF1-210ENST00000471445 ACEP12821 1306 aa30.02■■■□□ 2.4
SREBF1-210ENST00000471445 TONSLQ96HA7 1378 aa30.02■■■□□ 2.4
SREBF1-210ENST00000471445 SRPK2P78362 688 aaKnown RBP30.01■■■□□ 2.39
SREBF1-210ENST00000471445 GJD4Q96KN9 370 aaPredicted RBP30.01■■■□□ 2.39
SREBF1-210ENST00000471445 PAK3O75914 559 aaPredicted RBP30■■■□□ 2.39
SREBF1-210ENST00000471445 CABP2Q9NPB3 220 aa29.99■■■□□ 2.39
SREBF1-210ENST00000471445 NRKQ7Z2Y5 1582 aa29.97■■■□□ 2.39
SREBF1-210ENST00000471445 ATAD2Q6PL18 1390 aa29.95■■■□□ 2.39
SREBF1-210ENST00000471445 BRWD3Q6RI45 1802 aa29.95■■■□□ 2.39
SREBF1-210ENST00000471445 FAM83GA6ND36 823 aa29.95■■■□□ 2.39
SREBF1-210ENST00000471445 VPS72Q15906 364 aa29.94■■■□□ 2.38
SREBF1-210ENST00000471445 EVC2Q86UK5 1308 aa29.94■■■□□ 2.38
SREBF1-210ENST00000471445 SBNO2Q9Y2G9 1366 aa29.93■■■□□ 2.38
SREBF1-210ENST00000471445 AKAP12Q02952 1782 aa29.93■■■□□ 2.38
SREBF1-210ENST00000471445 BRD4O60885 1362 aaPredicted RBP29.91■■■□□ 2.38
SREBF1-210ENST00000471445 USP6P35125 1406 aa29.91■■■□□ 2.38
SREBF1-210ENST00000471445 CARD11Q9BXL7 1154 aa29.87■■■□□ 2.37
SREBF1-210ENST00000471445 USP19O94966 1318 aa29.87■■■□□ 2.37
SREBF1-210ENST00000471445 KIAA0232Q92628 1395 aa29.87■■■□□ 2.37
SREBF1-210ENST00000471445 PIK3C2AO00443 1686 aa29.86■■■□□ 2.37
SREBF1-210ENST00000471445 BTG4Q9NY30 223 aa29.86■■■□□ 2.37
SREBF1-210ENST00000471445 CABP1Q9NZU7 370 aa29.86■■■□□ 2.37
SREBF1-210ENST00000471445 NUTM2GQ5VZR2 741 aa29.85■■■□□ 2.37
SREBF1-210ENST00000471445 PRDM11Q9NQV5 511 aa29.85■■■□□ 2.37
SREBF1-210ENST00000471445 SSH2Q76I76 1423 aa29.85■■■□□ 2.37
SREBF1-210ENST00000471445 ABTB2Q8N961 1025 aa29.84■■■□□ 2.37
SREBF1-210ENST00000471445 LMO7Q8WWI1 1683 aa29.84■■■□□ 2.37
SREBF1-210ENST00000471445 MON2Q7Z3U7 1717 aa29.83■■■□□ 2.37
SREBF1-210ENST00000471445 SLIT3O75094 1523 aa29.82■■■□□ 2.36
SREBF1-210ENST00000471445 CCDC9Q9Y3X0 531 aaKnown RBP29.82■■■□□ 2.36
SREBF1-210ENST00000471445 THSD7AQ9UPZ6 1657 aa29.8■■■□□ 2.36
SREBF1-210ENST00000471445 ONECUT3O60422 494 aaPredicted RBP29.8■■■□□ 2.36
SREBF1-210ENST00000471445 CPDO75976 1380 aa29.79■■■□□ 2.36
SREBF1-210ENST00000471445 SEPT12Q8IYM1 358 aa29.78■■■□□ 2.36
SREBF1-210ENST00000471445 CPSF1Q10570 1443 aaKnown RBP29.78■■■□□ 2.36
SREBF1-210ENST00000471445 NLRP13Q86W25 1043 aa29.77■■■□□ 2.36
SREBF1-210ENST00000471445 ZC3H6P61129 1189 aaKnown RBP29.76■■■□□ 2.35
SREBF1-210ENST00000471445 CHRNA2Q15822 529 aa29.76■■■□□ 2.35
SREBF1-210ENST00000471445 SPATA31A5Q5VU36 1347 aa29.75■■■□□ 2.35
SREBF1-210ENST00000471445 SPATA31A7Q8IWB4 1347 aa29.75■■■□□ 2.35
SREBF1-210ENST00000471445 CAMTA1Q9Y6Y1 1673 aa29.75■■■□□ 2.35
SREBF1-210ENST00000471445 EP400Q96L91 3159 aa29.72■■■□□ 2.35
SREBF1-210ENST00000471445 USP54Q70EL1 1684 aa29.72■■■□□ 2.35
SREBF1-210ENST00000471445 GCP02774 474 aa29.71■■■□□ 2.35
SREBF1-210ENST00000471445 ZNF692Q9BU19 519 aaPredicted RBP29.71■■■□□ 2.35
SREBF1-210ENST00000471445 CD163L1Q9NR16 1453 aa29.71■■■□□ 2.35
SREBF1-210ENST00000471445 FAM98CQ17RN3 349 aaKnown RBP29.7■■■□□ 2.35
SREBF1-210ENST00000471445 TTC21BQ7Z4L5 1316 aa29.69■■■□□ 2.34
SREBF1-210ENST00000471445 COL18A1P39060 1754 aa29.68■■■□□ 2.34
SREBF1-210ENST00000471445 NLRP6P59044 892 aa29.68■■■□□ 2.34
SREBF1-210ENST00000471445 CCDC125Q86Z20 511 aa29.68■■■□□ 2.34
SREBF1-210ENST00000471445 BLMP54132 1417 aaPredicted RBP29.68■■■□□ 2.34
SREBF1-210ENST00000471445 SPATA31A1Q5TZJ5 1347 aa29.68■■■□□ 2.34
SREBF1-210ENST00000471445 TTC21AQ8NDW8 1320 aa29.68■■■□□ 2.34
SREBF1-210ENST00000471445 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
SREBF1-210ENST00000471445 COL5A2P05997 1499 aaPredicted RBP29.67■■■□□ 2.34
SREBF1-210ENST00000471445 KTN1Q86UP2 1357 aaKnown RBP29.66■■■□□ 2.34
SREBF1-210ENST00000471445 STRN4Q9NRL3 753 aa29.66■■■□□ 2.34
SREBF1-210ENST00000471445 A0A0G2JS52 829 aa29.65■■■□□ 2.34
SREBF1-210ENST00000471445 MYT1Q01538 1121 aa29.65■■■□□ 2.34
SREBF1-210ENST00000471445 CLSPNQ9HAW4 1339 aa29.65■■■□□ 2.34
SREBF1-210ENST00000471445 TESK2Q96S53 571 aa29.64■■■□□ 2.34
SREBF1-210ENST00000471445 NFAT5O94916 1531 aa29.63■■■□□ 2.33
SREBF1-210ENST00000471445 PUS7Q96PZ0 661 aaKnown RBP29.62■■■□□ 2.33
SREBF1-210ENST00000471445 AATKQ6ZMQ8 1374 aa29.61■■■□□ 2.33
SREBF1-210ENST00000471445 ST20-MTHFSA0A0A6YYL1 179 aa29.6■■■□□ 2.33
SREBF1-210ENST00000471445 RGPD1P0DJD0 1748 aa29.59■■■□□ 2.33
SREBF1-210ENST00000471445 RGPD5Q99666 1765 aa29.59■■■□□ 2.33
SREBF1-210ENST00000471445 WNK3Q9BYP7 1800 aa29.59■■■□□ 2.33
SREBF1-210ENST00000471445 EVA1CP58658 441 aa29.58■■■□□ 2.33
SREBF1-210ENST00000471445 USP47Q96K76 1375 aa29.58■■■□□ 2.33
SREBF1-210ENST00000471445 PARP4Q9UKK3 1724 aaKnown RBP29.57■■■□□ 2.32
SREBF1-210ENST00000471445 ABCC6O95255 1503 aa29.57■■■□□ 2.32
SREBF1-210ENST00000471445 A0A1W2PP64 1363 aa29.57■■■□□ 2.32
SREBF1-210ENST00000471445 USP31Q70CQ4 1352 aa29.57■■■□□ 2.32
SREBF1-210ENST00000471445 LARP1Q6PKG0 1096 aaKnown RBP29.57■■■□□ 2.32
SREBF1-210ENST00000471445 EDC4Q6P2E9 1401 aaKnown RBP29.56■■■□□ 2.32
SREBF1-210ENST00000471445 NINLQ9Y2I6 1382 aa29.56■■■□□ 2.32
SREBF1-210ENST00000471445 BARGINQ6ZT62 677 aa29.56■■■□□ 2.32
SREBF1-210ENST00000471445 TIMELESSQ9UNS1 1208 aa29.56■■■□□ 2.32
SREBF1-210ENST00000471445 TNS1Q9HBL0 1735 aaKnown RBP29.55■■■□□ 2.32
SREBF1-210ENST00000471445 KCNH5Q8NCM2 988 aa29.55■■■□□ 2.32
SREBF1-210ENST00000471445 TMC1Q8TDI8 760 aa29.55■■■□□ 2.32
SREBF1-210ENST00000471445 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
SREBF1-210ENST00000471445 SLC12A5Q9H2X9 1139 aa29.55■■■□□ 2.32
SREBF1-210ENST00000471445 CRB1P82279 1406 aa29.54■■■□□ 2.32
SREBF1-210ENST00000471445 LTN1O94822 1766 aa29.54■■■□□ 2.32
SREBF1-210ENST00000471445 SLC24A1O60721 1099 aa29.53■■■□□ 2.32
SREBF1-210ENST00000471445 HDGFL2Q7Z4V5 671 aaPredicted RBP29.53■■■□□ 2.32
SREBF1-210ENST00000471445 USP35Q9P2H5 1018 aa29.53■■■□□ 2.32
SREBF1-210ENST00000471445 ZBTB7CA1YPR0 619 aa29.52■■■□□ 2.32
SREBF1-210ENST00000471445 ARHGEF25Q86VW2 580 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms