RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
FDPS-209ENST00000471117 PXDNQ92626 1479 aa11.67□□□□□ -0.54
FDPS-209ENST00000471117 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
FDPS-209ENST00000471117 FOXO3O43524 673 aa11.66□□□□□ -0.54
FDPS-209ENST00000471117 PIK3C2GO75747 1445 aa11.66□□□□□ -0.54
FDPS-209ENST00000471117 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
FDPS-209ENST00000471117 METP08581 1390 aa11.66□□□□□ -0.54
FDPS-209ENST00000471117 NPHP3Q7Z494 1330 aa11.65□□□□□ -0.54
FDPS-209ENST00000471117 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
FDPS-209ENST00000471117 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
FDPS-209ENST00000471117 CARD11Q9BXL7 1154 aa11.65□□□□□ -0.54
FDPS-209ENST00000471117 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.55
FDPS-209ENST00000471117 USP47Q96K76 1375 aa11.65□□□□□ -0.55
FDPS-209ENST00000471117 UTRNP46939 3433 aa11.64□□□□□ -0.55
FDPS-209ENST00000471117 HSPA6P17066 643 aa11.64□□□□□ -0.55
FDPS-209ENST00000471117 NBPF1Q3BBV0 1214 aa11.64□□□□□ -0.55
FDPS-209ENST00000471117 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
FDPS-209ENST00000471117 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
FDPS-209ENST00000471117 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
FDPS-209ENST00000471117 PARD3Q8TEW0 1356 aa11.64□□□□□ -0.55
FDPS-209ENST00000471117 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
FDPS-209ENST00000471117 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
FDPS-209ENST00000471117 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
FDPS-209ENST00000471117 PDGFDQ9GZP0 370 aaPredicted RBP11.63□□□□□ -0.55
FDPS-209ENST00000471117 C14orf93Q9H972 538 aaKnown RBP11.63□□□□□ -0.55
FDPS-209ENST00000471117 FAM83GA6ND36 823 aa11.62□□□□□ -0.55
FDPS-209ENST00000471117 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
FDPS-209ENST00000471117 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
FDPS-209ENST00000471117 SHANK3Q9BYB0 1731 aa11.62□□□□□ -0.55
FDPS-209ENST00000471117 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
FDPS-209ENST00000471117 PRELPP51888 382 aa11.61□□□□□ -0.55
FDPS-209ENST00000471117 CCDC7Q96M83 1385 aa11.61□□□□□ -0.55
FDPS-209ENST00000471117 CASZ1Q86V15 1759 aa11.6□□□□□ -0.55
FDPS-209ENST00000471117 PTGER2P43116 358 aa11.6□□□□□ -0.55
FDPS-209ENST00000471117 GPR162Q16538 588 aa11.59□□□□□ -0.55
FDPS-209ENST00000471117 FAM196AQ6ZSG2 479 aa11.59□□□□□ -0.55
FDPS-209ENST00000471117 ADGRB1O14514 1584 aa11.58□□□□□ -0.55
FDPS-209ENST00000471117 NRAPQ86VF7 1730 aa11.58□□□□□ -0.56
FDPS-209ENST00000471117 EIF3AQ14152 1382 aaKnown RBP11.58□□□□□ -0.56
FDPS-209ENST00000471117 ST20-MTHFSA0A0A6YYL1 179 aa11.58□□□□□ -0.56
FDPS-209ENST00000471117 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
FDPS-209ENST00000471117 SPATA31A3Q5VYP0 1347 aa11.58□□□□□ -0.56
FDPS-209ENST00000471117 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
FDPS-209ENST00000471117 TNS4Q8IZW8 715 aa11.57□□□□□ -0.56
FDPS-209ENST00000471117 PCDH10Q9P2E7 1040 aa11.57□□□□□ -0.56
FDPS-209ENST00000471117 DLC1Q96QB1 1528 aa11.56□□□□□ -0.56
FDPS-209ENST00000471117 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
FDPS-209ENST00000471117 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
FDPS-209ENST00000471117 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
FDPS-209ENST00000471117 BTG4Q9NY30 223 aa11.56□□□□□ -0.56
FDPS-209ENST00000471117 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
FDPS-209ENST00000471117 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
FDPS-209ENST00000471117 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
FDPS-209ENST00000471117 SPATA31A5Q5VU36 1347 aa11.54□□□□□ -0.56
FDPS-209ENST00000471117 SPATA31A7Q8IWB4 1347 aa11.54□□□□□ -0.56
FDPS-209ENST00000471117 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
FDPS-209ENST00000471117 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
FDPS-209ENST00000471117 YTHDC2Q9H6S0 1430 aaKnown RBP11.53□□□□□ -0.56
FDPS-209ENST00000471117 QRICH2Q9H0J4 1663 aa11.53□□□□□ -0.56
FDPS-209ENST00000471117 KNDC1Q76NI1 1749 aa11.53□□□□□ -0.56
FDPS-209ENST00000471117 ANP32CO43423 234 aa11.53□□□□□ -0.56
FDPS-209ENST00000471117 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
FDPS-209ENST00000471117 TRAK1Q9UPV9 953 aa11.53□□□□□ -0.56
FDPS-209ENST00000471117 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
FDPS-209ENST00000471117 KRT28Q7Z3Y7 464 aa11.52□□□□□ -0.57
FDPS-209ENST00000471117 POLR3GLQ9BT43 218 aa11.52□□□□□ -0.57
FDPS-209ENST00000471117 STK26Q9P289 416 aa11.52□□□□□ -0.57
FDPS-209ENST00000471117 TESK2Q96S53 571 aa11.51□□□□□ -0.57
FDPS-209ENST00000471117 CENPJQ9HC77 1338 aaPredicted RBP11.51□□□□□ -0.57
FDPS-209ENST00000471117 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
FDPS-209ENST00000471117 ABCC11Q96J66 1382 aa11.5□□□□□ -0.57
FDPS-209ENST00000471117 ATP10DQ9P241 1426 aa11.5□□□□□ -0.57
FDPS-209ENST00000471117 TMF1P82094 1093 aa11.49□□□□□ -0.57
FDPS-209ENST00000471117 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
FDPS-209ENST00000471117 SBNO2Q9Y2G9 1366 aa11.49□□□□□ -0.57
FDPS-209ENST00000471117 KLHL34Q8N239 644 aa11.48□□□□□ -0.57
FDPS-209ENST00000471117 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
FDPS-209ENST00000471117 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
FDPS-209ENST00000471117 ARXQ96QS3 562 aa11.48□□□□□ -0.57
FDPS-209ENST00000471117 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
FDPS-209ENST00000471117 POGKQ9P215 609 aa11.48□□□□□ -0.57
FDPS-209ENST00000471117 TECPR2O15040 1411 aa11.48□□□□□ -0.57
FDPS-209ENST00000471117 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
FDPS-209ENST00000471117 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
FDPS-209ENST00000471117 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
FDPS-209ENST00000471117 CDCA8Q53HL2 280 aa11.47□□□□□ -0.57
FDPS-209ENST00000471117 COL14A1Q05707 1796 aaKnown RBP11.46□□□□□ -0.57
FDPS-209ENST00000471117 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.57
FDPS-209ENST00000471117 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.57
FDPS-209ENST00000471117 PRAM1Q96QH2 718 aa11.46□□□□□ -0.57
FDPS-209ENST00000471117 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
FDPS-209ENST00000471117 APLP1P51693 650 aa11.45□□□□□ -0.58
FDPS-209ENST00000471117 RGPD8O14715 1765 aaPredicted RBP11.45□□□□□ -0.58
FDPS-209ENST00000471117 SPATA31A1Q5TZJ5 1347 aa11.44□□□□□ -0.58
FDPS-209ENST00000471117 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
FDPS-209ENST00000471117 MTFR1LQ9H019 292 aa11.44□□□□□ -0.58
FDPS-209ENST00000471117 USP35Q9P2H5 1018 aa11.44□□□□□ -0.58
FDPS-209ENST00000471117 KIF1AQ12756 1690 aa11.43□□□□□ -0.58
FDPS-209ENST00000471117 EVC2Q86UK5 1308 aa11.43□□□□□ -0.58
FDPS-209ENST00000471117 WAPLQ7Z5K2 1190 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms