RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 QTRT2Q9H974 415 aaKnown RBP20.03■□□□□ 0.8
TOP3B-215ENST00000470338 USP21Q9UK80 565 aa20.03■□□□□ 0.8
TOP3B-215ENST00000470338 RXRBP28702 533 aa20.02■□□□□ 0.8
TOP3B-215ENST00000470338 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
TOP3B-215ENST00000470338 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
TOP3B-215ENST00000470338 HAP1P54257 671 aaPredicted RBP20.01■□□□□ 0.79
TOP3B-215ENST00000470338 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
TOP3B-215ENST00000470338 TNKS1BP1Q9C0C2 1729 aaKnown RBP20■□□□□ 0.79
TOP3B-215ENST00000470338 AKAP12Q02952 1782 aa20■□□□□ 0.79
TOP3B-215ENST00000470338 SLIT2O94813 1529 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 TESK2Q96S53 571 aa19.99■□□□□ 0.79
TOP3B-215ENST00000470338 RBM6P78332 1123 aaKnown RBP19.98■□□□□ 0.79
TOP3B-215ENST00000470338 TRPC5Q9UL62 973 aaPredicted RBP19.98■□□□□ 0.79
TOP3B-215ENST00000470338 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
TOP3B-215ENST00000470338 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
TOP3B-215ENST00000470338 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
TOP3B-215ENST00000470338 ATRNO75882 1429 aa19.97■□□□□ 0.79
TOP3B-215ENST00000470338 USP6P35125 1406 aa19.97■□□□□ 0.79
TOP3B-215ENST00000470338 PUS7Q96PZ0 661 aaKnown RBP19.97■□□□□ 0.79
TOP3B-215ENST00000470338 SSH2Q76I76 1423 aa19.96■□□□□ 0.79
TOP3B-215ENST00000470338 PHRF1Q9P1Y6 1649 aaKnown RBP19.96■□□□□ 0.79
TOP3B-215ENST00000470338 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
TOP3B-215ENST00000470338 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
TOP3B-215ENST00000470338 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 UNC5CLQ8IV45 518 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 ABTB2Q8N961 1025 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 USP47Q96K76 1375 aa19.95■□□□□ 0.78
TOP3B-215ENST00000470338 CPSF1Q10570 1443 aaKnown RBP19.94■□□□□ 0.78
TOP3B-215ENST00000470338 COL14A1Q05707 1796 aaKnown RBP19.94■□□□□ 0.78
TOP3B-215ENST00000470338 NUTM2GQ5VZR2 741 aa19.93■□□□□ 0.78
TOP3B-215ENST00000470338 MON2Q7Z3U7 1717 aa19.92■□□□□ 0.78
TOP3B-215ENST00000470338 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
TOP3B-215ENST00000470338 USP19O94966 1318 aa19.91■□□□□ 0.78
TOP3B-215ENST00000470338 GJD4Q96KN9 370 aaPredicted RBP19.9■□□□□ 0.78
TOP3B-215ENST00000470338 CD163L1Q9NR16 1453 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 NRKQ7Z2Y5 1582 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 PIK3C2AO00443 1686 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 NRAPQ86VF7 1730 aa19.9■□□□□ 0.78
TOP3B-215ENST00000470338 RGS12O14924 1447 aa19.89■□□□□ 0.77
TOP3B-215ENST00000470338 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
TOP3B-215ENST00000470338 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
TOP3B-215ENST00000470338 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
TOP3B-215ENST00000470338 GLI3P10071 1580 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 KIAA0232Q92628 1395 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 NLRP6P59044 892 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 VPS72Q15906 364 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 TMC1Q8TDI8 760 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 PRDM11Q9NQV5 511 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 BTG4Q9NY30 223 aa19.87■□□□□ 0.77
TOP3B-215ENST00000470338 GCP02774 474 aa19.86■□□□□ 0.77
TOP3B-215ENST00000470338 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
TOP3B-215ENST00000470338 TMF1P82094 1093 aa19.86■□□□□ 0.77
TOP3B-215ENST00000470338 CPDO75976 1380 aa19.85■□□□□ 0.77
TOP3B-215ENST00000470338 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
TOP3B-215ENST00000470338 SLIT3O75094 1523 aa19.85■□□□□ 0.77
TOP3B-215ENST00000470338 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-215ENST00000470338 TERF2IPQ9NYB0 399 aa19.84■□□□□ 0.77
TOP3B-215ENST00000470338 CHRNA2Q15822 529 aa19.83■□□□□ 0.77
TOP3B-215ENST00000470338 A0A1W2PP64 1363 aa19.82■□□□□ 0.76
TOP3B-215ENST00000470338 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
TOP3B-215ENST00000470338 LMO7Q8WWI1 1683 aa19.81■□□□□ 0.76
TOP3B-215ENST00000470338 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
TOP3B-215ENST00000470338 ONECUT3O60422 494 aaPredicted RBP19.8■□□□□ 0.76
TOP3B-215ENST00000470338 CDCA8Q53HL2 280 aa19.8■□□□□ 0.76
TOP3B-215ENST00000470338 USP31Q70CQ4 1352 aa19.8■□□□□ 0.76
TOP3B-215ENST00000470338 BRWD3Q6RI45 1802 aa19.79■□□□□ 0.76
TOP3B-215ENST00000470338 CAMTA1Q9Y6Y1 1673 aa19.79■□□□□ 0.76
TOP3B-215ENST00000470338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
TOP3B-215ENST00000470338 CCDC9Q9Y3X0 531 aaKnown RBP19.79■□□□□ 0.76
TOP3B-215ENST00000470338 COL18A1P39060 1754 aa19.78■□□□□ 0.76
TOP3B-215ENST00000470338 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
TOP3B-215ENST00000470338 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
TOP3B-215ENST00000470338 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
TOP3B-215ENST00000470338 KCNH5Q8NCM2 988 aa19.77■□□□□ 0.76
TOP3B-215ENST00000470338 UPF1Q92900 1129 aaKnown RBP eCLIP19.77■□□□□ 0.76
TOP3B-215ENST00000470338 NME9Q86XW9 330 aa19.76■□□□□ 0.75
TOP3B-215ENST00000470338 ZRANB1Q9UGI0 708 aa19.76■□□□□ 0.75
TOP3B-215ENST00000470338 AATKQ6ZMQ8 1374 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 NFAT5O94916 1531 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 MYOM1P52179 1685 aa19.75■□□□□ 0.75
TOP3B-215ENST00000470338 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
TOP3B-215ENST00000470338 ARHGEF25Q86VW2 580 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 STRN4Q9NRL3 753 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
TOP3B-215ENST00000470338 EVA1CP58658 441 aa19.73■□□□□ 0.75
TOP3B-215ENST00000470338 SPATA31A1Q5TZJ5 1347 aa19.73■□□□□ 0.75
TOP3B-215ENST00000470338 EP400Q96L91 3159 aa19.73■□□□□ 0.75
TOP3B-215ENST00000470338 FAM98CQ17RN3 349 aaKnown RBP19.71■□□□□ 0.75
TOP3B-215ENST00000470338 COL5A2P05997 1499 aaPredicted RBP19.71■□□□□ 0.75
TOP3B-215ENST00000470338 OVOS2A0A0J9YW53 1432 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 OVOS2Q6IE36 1432 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 LARP1Q6PKG0 1096 aaKnown RBP19.7■□□□□ 0.74
TOP3B-215ENST00000470338 THSD7AQ9UPZ6 1657 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 LTN1O94822 1766 aa19.7■□□□□ 0.74
TOP3B-215ENST00000470338 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms