RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
COMMD3-208ENST00000470045 NGDNQ8NEJ9 315 aaKnown RBP20.15■□□□□ 0.82
COMMD3-208ENST00000470045 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.81
COMMD3-208ENST00000470045 PLEKHG3A1L390 1219 aa20.14■□□□□ 0.81
COMMD3-208ENST00000470045 TRPC5Q9UL62 973 aaPredicted RBP20.14■□□□□ 0.81
COMMD3-208ENST00000470045 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
COMMD3-208ENST00000470045 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
COMMD3-208ENST00000470045 NRAPQ86VF7 1730 aa20.12■□□□□ 0.81
COMMD3-208ENST00000470045 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
COMMD3-208ENST00000470045 ACEP12821 1306 aa20.11■□□□□ 0.81
COMMD3-208ENST00000470045 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
COMMD3-208ENST00000470045 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
COMMD3-208ENST00000470045 GLI3P10071 1580 aa20.11■□□□□ 0.81
COMMD3-208ENST00000470045 COL14A1Q05707 1796 aaKnown RBP20.11■□□□□ 0.81
COMMD3-208ENST00000470045 SRPK2P78362 688 aaKnown RBP20.1■□□□□ 0.81
COMMD3-208ENST00000470045 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
COMMD3-208ENST00000470045 CABP2Q9NPB3 220 aa20.09■□□□□ 0.81
COMMD3-208ENST00000470045 EVC2Q86UK5 1308 aa20.08■□□□□ 0.81
COMMD3-208ENST00000470045 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
COMMD3-208ENST00000470045 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
COMMD3-208ENST00000470045 BRD4O60885 1362 aaPredicted RBP20.07■□□□□ 0.8
COMMD3-208ENST00000470045 PAK3O75914 559 aaPredicted RBP20.06■□□□□ 0.8
COMMD3-208ENST00000470045 NRKQ7Z2Y5 1582 aa20.06■□□□□ 0.8
COMMD3-208ENST00000470045 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
COMMD3-208ENST00000470045 USP6P35125 1406 aa20.04■□□□□ 0.8
COMMD3-208ENST00000470045 GJD4Q96KN9 370 aaPredicted RBP20.04■□□□□ 0.8
COMMD3-208ENST00000470045 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
COMMD3-208ENST00000470045 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
COMMD3-208ENST00000470045 RNF39Q9H2S5 420 aa20.03■□□□□ 0.8
COMMD3-208ENST00000470045 SSH2Q76I76 1423 aa20.02■□□□□ 0.8
COMMD3-208ENST00000470045 UPF1Q92900 1129 aaKnown RBP eCLIP20.02■□□□□ 0.8
COMMD3-208ENST00000470045 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 ATAD2Q6PL18 1390 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 VPS72Q15906 364 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 CABP1Q9NZU7 370 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 USP19O94966 1318 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
COMMD3-208ENST00000470045 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
COMMD3-208ENST00000470045 LMO7Q8WWI1 1683 aa19.99■□□□□ 0.79
COMMD3-208ENST00000470045 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
COMMD3-208ENST00000470045 SLIT3O75094 1523 aa19.97■□□□□ 0.79
COMMD3-208ENST00000470045 KIAA0232Q92628 1395 aa19.97■□□□□ 0.79
COMMD3-208ENST00000470045 NUTM2GQ5VZR2 741 aa19.96■□□□□ 0.79
COMMD3-208ENST00000470045 ABTB2Q8N961 1025 aa19.96■□□□□ 0.79
COMMD3-208ENST00000470045 BTG4Q9NY30 223 aa19.96■□□□□ 0.79
COMMD3-208ENST00000470045 CPDO75976 1380 aa19.95■□□□□ 0.79
COMMD3-208ENST00000470045 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
COMMD3-208ENST00000470045 USP54Q70EL1 1684 aa19.94■□□□□ 0.78
COMMD3-208ENST00000470045 CD163L1Q9NR16 1453 aa19.94■□□□□ 0.78
COMMD3-208ENST00000470045 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
COMMD3-208ENST00000470045 PCGF6Q9BYE7 350 aa19.94■□□□□ 0.78
COMMD3-208ENST00000470045 TIMELESSQ9UNS1 1208 aa19.94■□□□□ 0.78
COMMD3-208ENST00000470045 ONECUT3O60422 494 aaPredicted RBP19.93■□□□□ 0.78
COMMD3-208ENST00000470045 ZNF692Q9BU19 519 aaPredicted RBP19.93■□□□□ 0.78
COMMD3-208ENST00000470045 THSD7AQ9UPZ6 1657 aa19.93■□□□□ 0.78
COMMD3-208ENST00000470045 TESK2Q96S53 571 aa19.92■□□□□ 0.78
COMMD3-208ENST00000470045 EP400Q96L91 3159 aa19.92■□□□□ 0.78
COMMD3-208ENST00000470045 CAMTA1Q9Y6Y1 1673 aa19.91■□□□□ 0.78
COMMD3-208ENST00000470045 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
COMMD3-208ENST00000470045 ZC3H6P61129 1189 aaKnown RBP19.9■□□□□ 0.78
COMMD3-208ENST00000470045 SPATA31A5Q5VU36 1347 aa19.9■□□□□ 0.78
COMMD3-208ENST00000470045 TTC21BQ7Z4L5 1316 aa19.9■□□□□ 0.78
COMMD3-208ENST00000470045 SPATA31A7Q8IWB4 1347 aa19.9■□□□□ 0.78
COMMD3-208ENST00000470045 ST20-MTHFSA0A0A6YYL1 179 aa19.89■□□□□ 0.77
COMMD3-208ENST00000470045 GCP02774 474 aa19.89■□□□□ 0.77
COMMD3-208ENST00000470045 COL18A1P39060 1754 aa19.89■□□□□ 0.77
COMMD3-208ENST00000470045 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
COMMD3-208ENST00000470045 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
COMMD3-208ENST00000470045 TTC21AQ8NDW8 1320 aa19.89■□□□□ 0.77
COMMD3-208ENST00000470045 CCDC9Q9Y3X0 531 aaKnown RBP19.89■□□□□ 0.77
COMMD3-208ENST00000470045 USP47Q96K76 1375 aa19.88■□□□□ 0.77
COMMD3-208ENST00000470045 SEPT12Q8IYM1 358 aa19.88■□□□□ 0.77
COMMD3-208ENST00000470045 NLRP6P59044 892 aa19.87■□□□□ 0.77
COMMD3-208ENST00000470045 NFAT5O94916 1531 aa19.86■□□□□ 0.77
COMMD3-208ENST00000470045 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
COMMD3-208ENST00000470045 SPATA31A1Q5TZJ5 1347 aa19.85■□□□□ 0.77
COMMD3-208ENST00000470045 SLC24A1O60721 1099 aa19.85■□□□□ 0.77
COMMD3-208ENST00000470045 COL5A2P05997 1499 aaPredicted RBP19.85■□□□□ 0.77
COMMD3-208ENST00000470045 EDC4Q6P2E9 1401 aaKnown RBP19.84■□□□□ 0.77
COMMD3-208ENST00000470045 A0A1W2PP64 1363 aa19.83■□□□□ 0.77
COMMD3-208ENST00000470045 AATKQ6ZMQ8 1374 aa19.83■□□□□ 0.77
COMMD3-208ENST00000470045 USP31Q70CQ4 1352 aa19.83■□□□□ 0.77
COMMD3-208ENST00000470045 FAM98CQ17RN3 349 aaKnown RBP19.83■□□□□ 0.77
COMMD3-208ENST00000470045 ABCC6O95255 1503 aa19.82■□□□□ 0.76
COMMD3-208ENST00000470045 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
COMMD3-208ENST00000470045 RGPD5Q99666 1765 aa19.81■□□□□ 0.76
COMMD3-208ENST00000470045 CCDC125Q86Z20 511 aa19.81■□□□□ 0.76
COMMD3-208ENST00000470045 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
COMMD3-208ENST00000470045 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
COMMD3-208ENST00000470045 KRT27Q7Z3Y8 459 aa19.8■□□□□ 0.76
COMMD3-208ENST00000470045 HDGFL2Q7Z4V5 671 aaPredicted RBP19.8■□□□□ 0.76
COMMD3-208ENST00000470045 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
COMMD3-208ENST00000470045 WNK3Q9BYP7 1800 aa19.79■□□□□ 0.76
COMMD3-208ENST00000470045 KCNH5Q8NCM2 988 aa19.79■□□□□ 0.76
COMMD3-208ENST00000470045 TERF2IPQ9NYB0 399 aa19.79■□□□□ 0.76
COMMD3-208ENST00000470045 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
COMMD3-208ENST00000470045 MYOM1P52179 1685 aa19.78■□□□□ 0.76
COMMD3-208ENST00000470045 LTN1O94822 1766 aa19.78■□□□□ 0.76
COMMD3-208ENST00000470045 OVOS2A0A0J9YW53 1432 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms