RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 WWC1Q8IX03 1113 aa19.02■□□□□ 0.64
BRAT1-204ENST00000469750 TBC1D2BQ9UPU7 963 aa19.02■□□□□ 0.64
BRAT1-204ENST00000469750 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
BRAT1-204ENST00000469750 HDGFL1Q5TGJ6 251 aa19.02■□□□□ 0.63
BRAT1-204ENST00000469750 PRM3Q9NNZ6 103 aa19.02■□□□□ 0.63
BRAT1-204ENST00000469750 STRN4Q9NRL3 753 aa19.02■□□□□ 0.63
BRAT1-204ENST00000469750 GNAI2P04899 355 aa19.01■□□□□ 0.63
BRAT1-204ENST00000469750 FOSBP53539 338 aa19.01■□□□□ 0.63
BRAT1-204ENST00000469750 SASS6Q6UVJ0 657 aa19.01■□□□□ 0.63
BRAT1-204ENST00000469750 FYB1O15117 783 aa19.01■□□□□ 0.63
BRAT1-204ENST00000469750 TSR2Q969E8 191 aaKnown RBP19.01■□□□□ 0.63
BRAT1-204ENST00000469750 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
BRAT1-204ENST00000469750 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
BRAT1-204ENST00000469750 GCC1Q96CN9 775 aa19.01■□□□□ 0.63
BRAT1-204ENST00000469750 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-204ENST00000469750 SLC4A2P04920 1241 aa19■□□□□ 0.63
BRAT1-204ENST00000469750 ZSCAN21Q9Y5A6 473 aaPredicted RBP19■□□□□ 0.63
BRAT1-204ENST00000469750 NOB1Q9ULX3 412 aaKnown RBP19■□□□□ 0.63
BRAT1-204ENST00000469750 PDZRN3Q9UPQ7 1066 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 DNMBPQ6XZF7 1577 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 HIP1O00291 1037 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 CCDC70Q6NSX1 233 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 FAM177BA6PVY3 158 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 ZNF530Q6P9A1 599 aaPredicted RBP18.99■□□□□ 0.63
BRAT1-204ENST00000469750 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
BRAT1-204ENST00000469750 CT47B1P0C2W7 299 aaPredicted RBP18.98■□□□□ 0.63
BRAT1-204ENST00000469750 ANKLE2Q86XL3 938 aa18.98■□□□□ 0.63
BRAT1-204ENST00000469750 DNAJC2Q99543 621 aaKnown RBP18.98■□□□□ 0.63
BRAT1-204ENST00000469750 CCDC43Q96MW1 224 aaKnown RBP18.98■□□□□ 0.63
BRAT1-204ENST00000469750 BRMS1Q9HCU9 246 aa18.98■□□□□ 0.63
BRAT1-204ENST00000469750 PODXL2Q9NZ53 605 aa18.98■□□□□ 0.63
BRAT1-204ENST00000469750 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
BRAT1-204ENST00000469750 SLC26A8Q96RN1 970 aa18.98■□□□□ 0.63
BRAT1-204ENST00000469750 XBP1P17861 261 aa18.97■□□□□ 0.63
BRAT1-204ENST00000469750 C1orf115Q9H7X2 142 aa18.97■□□□□ 0.63
BRAT1-204ENST00000469750 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
BRAT1-204ENST00000469750 KIAA0586Q9BVV6 1533 aa18.97■□□□□ 0.63
BRAT1-204ENST00000469750 SART3Q15020 963 aaKnown RBP18.97■□□□□ 0.63
BRAT1-204ENST00000469750 CABP4P57796 275 aa18.96■□□□□ 0.63
BRAT1-204ENST00000469750 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
BRAT1-204ENST00000469750 POGZQ7Z3K3 1410 aa18.96■□□□□ 0.63
BRAT1-204ENST00000469750 ZNF592Q92610 1267 aa18.96■□□□□ 0.63
BRAT1-204ENST00000469750 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
BRAT1-204ENST00000469750 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
BRAT1-204ENST00000469750 BCAR3O75815 825 aa18.95■□□□□ 0.62
BRAT1-204ENST00000469750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
BRAT1-204ENST00000469750 SRCIN1Q9C0H9 1055 aa18.94■□□□□ 0.62
BRAT1-204ENST00000469750 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
BRAT1-204ENST00000469750 SAMD1Q6SPF0 538 aaPredicted RBP18.94■□□□□ 0.62
BRAT1-204ENST00000469750 EPRSP07814 1512 aaKnown RBP18.94■□□□□ 0.62
BRAT1-204ENST00000469750 MCM2P49736 904 aa18.94■□□□□ 0.62
BRAT1-204ENST00000469750 NEK4P51957 841 aa18.93■□□□□ 0.62
BRAT1-204ENST00000469750 CNNM1Q9NRU3 951 aa18.93■□□□□ 0.62
BRAT1-204ENST00000469750 HOMER1Q86YM7 354 aa18.93■□□□□ 0.62
BRAT1-204ENST00000469750 CCDC158Q5M9N0 1113 aa18.92■□□□□ 0.62
BRAT1-204ENST00000469750 CDK13Q14004 1512 aaKnown RBP18.92■□□□□ 0.62
BRAT1-204ENST00000469750 RABEP1Q15276 862 aa18.92■□□□□ 0.62
BRAT1-204ENST00000469750 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
BRAT1-204ENST00000469750 DDX54Q8TDD1 881 aaKnown RBP18.91■□□□□ 0.62
BRAT1-204ENST00000469750 GPS2Q13227 327 aa18.91■□□□□ 0.62
BRAT1-204ENST00000469750 ANO8Q9HCE9 1232 aaPredicted RBP18.91■□□□□ 0.62
BRAT1-204ENST00000469750 CWC22Q9HCG8 908 aaKnown RBP18.91■□□□□ 0.62
BRAT1-204ENST00000469750 TTC39AQ5SRH9 613 aa18.9■□□□□ 0.62
BRAT1-204ENST00000469750 SDF4Q9BRK5 362 aa18.9■□□□□ 0.62
BRAT1-204ENST00000469750 PDCP20941 246 aa18.9■□□□□ 0.62
BRAT1-204ENST00000469750 FCHSD2O94868 740 aa18.9■□□□□ 0.62
BRAT1-204ENST00000469750 LRRCC1Q9C099 1032 aa18.9■□□□□ 0.62
BRAT1-204ENST00000469750 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
BRAT1-204ENST00000469750 MTMR7Q9Y216 660 aa18.9■□□□□ 0.62
BRAT1-204ENST00000469750 SLC3A2P08195 630 aaKnown RBP18.89■□□□□ 0.62
BRAT1-204ENST00000469750 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.62
BRAT1-204ENST00000469750 GNL3LQ9NVN8 582 aaKnown RBP18.89■□□□□ 0.62
BRAT1-204ENST00000469750 NFKBIBQ15653 356 aa18.89■□□□□ 0.61
BRAT1-204ENST00000469750 NAT10Q9H0A0 1025 aaKnown RBP18.89■□□□□ 0.61
BRAT1-204ENST00000469750 CCDC141Q6ZP82 1450 aa18.89■□□□□ 0.61
BRAT1-204ENST00000469750 OLFM4Q6UX06 510 aa18.89■□□□□ 0.61
BRAT1-204ENST00000469750 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
BRAT1-204ENST00000469750 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
BRAT1-204ENST00000469750 NAIPQ13075 1403 aa18.88■□□□□ 0.61
BRAT1-204ENST00000469750 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.88■□□□□ 0.611e-6■■■■■ 30.3
BRAT1-204ENST00000469750 IKQ13123 557 aaPredicted RBP18.87■□□□□ 0.61
BRAT1-204ENST00000469750 NUDT16Q96DE0 195 aaKnown RBP18.87■□□□□ 0.61
BRAT1-204ENST00000469750 ABCA10Q8WWZ4 1543 aa18.87■□□□□ 0.61
BRAT1-204ENST00000469750 SETQ01105 290 aaPredicted RBP18.87■□□□□ 0.61
BRAT1-204ENST00000469750 ZNF771Q7L3S4 317 aaPredicted RBP18.87■□□□□ 0.61
BRAT1-204ENST00000469750 AKNAQ7Z591 1439 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 NSD3Q9BZ95 1437 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 MAGI1Q96QZ7 1491 aaPredicted RBP18.86■□□□□ 0.61
BRAT1-204ENST00000469750 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 ZNF428Q96B54 188 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 MBD3O95983 291 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 MYL6BP14649 208 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 SIL1Q9H173 461 aa18.86■□□□□ 0.61
BRAT1-204ENST00000469750 RRP12Q5JTH9 1297 aaKnown RBP18.85■□□□□ 0.61
BRAT1-204ENST00000469750 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
BRAT1-204ENST00000469750 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
BRAT1-204ENST00000469750 KDM4AO75164 1064 aa18.84■□□□□ 0.61
BRAT1-204ENST00000469750 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms