RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 PRR36Q9H6K5 1346 aa18.43■□□□□ 0.54
GAPVD1-214ENST00000469528 TULP4Q9NRJ4 1543 aa18.42■□□□□ 0.54
GAPVD1-214ENST00000469528 CDK19Q9BWU1 502 aa18.41■□□□□ 0.54
GAPVD1-214ENST00000469528 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
GAPVD1-214ENST00000469528 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
GAPVD1-214ENST00000469528 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
GAPVD1-214ENST00000469528 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
GAPVD1-214ENST00000469528 BRWD3Q6RI45 1802 aa18.4■□□□□ 0.54
GAPVD1-214ENST00000469528 EVA1CP58658 441 aa18.39■□□□□ 0.53
GAPVD1-214ENST00000469528 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
GAPVD1-214ENST00000469528 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
GAPVD1-214ENST00000469528 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
GAPVD1-214ENST00000469528 FAM196AQ6ZSG2 479 aa18.36■□□□□ 0.53
GAPVD1-214ENST00000469528 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
GAPVD1-214ENST00000469528 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
GAPVD1-214ENST00000469528 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
GAPVD1-214ENST00000469528 ALS2Q96Q42 1657 aa18.34■□□□□ 0.53
GAPVD1-214ENST00000469528 ACEP12821 1306 aa18.34■□□□□ 0.53
GAPVD1-214ENST00000469528 SPATA31A1Q5TZJ5 1347 aa18.34■□□□□ 0.53
GAPVD1-214ENST00000469528 ZC3H6P61129 1189 aaKnown RBP18.34■□□□□ 0.53
GAPVD1-214ENST00000469528 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
GAPVD1-214ENST00000469528 KIAA0232Q92628 1395 aa18.33■□□□□ 0.53
GAPVD1-214ENST00000469528 EN1Q05925 392 aaPredicted RBP18.33■□□□□ 0.52
GAPVD1-214ENST00000469528 NLRP13Q86W25 1043 aa18.33■□□□□ 0.52
GAPVD1-214ENST00000469528 ATP7BP35670 1465 aa18.33■□□□□ 0.52
GAPVD1-214ENST00000469528 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
GAPVD1-214ENST00000469528 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
GAPVD1-214ENST00000469528 POLR3AO14802 1390 aaPredicted RBP18.31■□□□□ 0.52
GAPVD1-214ENST00000469528 SRPK2P78362 688 aaKnown RBP18.31■□□□□ 0.52
GAPVD1-214ENST00000469528 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
GAPVD1-214ENST00000469528 BARGINQ6ZT62 677 aa18.31■□□□□ 0.52
GAPVD1-214ENST00000469528 ITSN1Q15811 1721 aa18.3■□□□□ 0.52
GAPVD1-214ENST00000469528 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
GAPVD1-214ENST00000469528 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
GAPVD1-214ENST00000469528 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
GAPVD1-214ENST00000469528 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
GAPVD1-214ENST00000469528 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
GAPVD1-214ENST00000469528 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
GAPVD1-214ENST00000469528 BRD4O60885 1362 aaPredicted RBP18.29■□□□□ 0.52
GAPVD1-214ENST00000469528 TRIM37O94972 964 aa18.27■□□□□ 0.52
GAPVD1-214ENST00000469528 APBA3O96018 575 aa18.27■□□□□ 0.52
GAPVD1-214ENST00000469528 NBPF1Q3BBV0 1214 aa18.27■□□□□ 0.52
GAPVD1-214ENST00000469528 TCP11L2Q8N4U5 519 aa18.27■□□□□ 0.52
GAPVD1-214ENST00000469528 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
GAPVD1-214ENST00000469528 GCP02774 474 aa18.26■□□□□ 0.51
GAPVD1-214ENST00000469528 ARHGEF28Q8N1W1 1705 aaKnown RBP18.26■□□□□ 0.51
GAPVD1-214ENST00000469528 DISP2A7MBM2 1401 aa18.25■□□□□ 0.51
GAPVD1-214ENST00000469528 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
GAPVD1-214ENST00000469528 CPDO75976 1380 aa18.25■□□□□ 0.51
GAPVD1-214ENST00000469528 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
GAPVD1-214ENST00000469528 R3HDM1Q15032 1099 aaKnown RBP18.24■□□□□ 0.51
GAPVD1-214ENST00000469528 NBPF14Q5TI25 921 aa18.24■□□□□ 0.51
GAPVD1-214ENST00000469528 CAMKK2Q96RR4 588 aa18.24■□□□□ 0.51
GAPVD1-214ENST00000469528 PARD3Q8TEW0 1356 aa18.24■□□□□ 0.51
GAPVD1-214ENST00000469528 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
GAPVD1-214ENST00000469528 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
GAPVD1-214ENST00000469528 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
GAPVD1-214ENST00000469528 PPIP5K1Q6PFW1 1433 aa18.22■□□□□ 0.51
GAPVD1-214ENST00000469528 SSH2Q76I76 1423 aa18.22■□□□□ 0.51
GAPVD1-214ENST00000469528 USP19O94966 1318 aa18.22■□□□□ 0.51
GAPVD1-214ENST00000469528 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
GAPVD1-214ENST00000469528 CRYBG1Q9Y4K1 1723 aa18.21■□□□□ 0.51
GAPVD1-214ENST00000469528 NLRP6P59044 892 aa18.21■□□□□ 0.51
GAPVD1-214ENST00000469528 ZNF692Q9BU19 519 aaPredicted RBP18.21■□□□□ 0.51
GAPVD1-214ENST00000469528 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
GAPVD1-214ENST00000469528 LRP5O75197 1615 aa18.2■□□□□ 0.5
GAPVD1-214ENST00000469528 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
GAPVD1-214ENST00000469528 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
GAPVD1-214ENST00000469528 CAMTA1Q9Y6Y1 1673 aa18.16■□□□□ 0.5
GAPVD1-214ENST00000469528 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
GAPVD1-214ENST00000469528 KCNH5Q8NCM2 988 aa18.16■□□□□ 0.5
GAPVD1-214ENST00000469528 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
GAPVD1-214ENST00000469528 L3MBTL2Q969R5 705 aa18.15■□□□□ 0.5
GAPVD1-214ENST00000469528 CDCA7Q9BWT1 371 aaPredicted RBP18.15■□□□□ 0.5
GAPVD1-214ENST00000469528 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
GAPVD1-214ENST00000469528 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
GAPVD1-214ENST00000469528 CRB1P82279 1406 aa18.14■□□□□ 0.49
GAPVD1-214ENST00000469528 DDB1Q16531 1140 aa18.13■□□□□ 0.49
GAPVD1-214ENST00000469528 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
GAPVD1-214ENST00000469528 USP6P35125 1406 aa18.12■□□□□ 0.49
GAPVD1-214ENST00000469528 PLSCR1O15162 318 aa18.11■□□□□ 0.49
GAPVD1-214ENST00000469528 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
GAPVD1-214ENST00000469528 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
GAPVD1-214ENST00000469528 COL5A2P05997 1499 aaPredicted RBP18.1■□□□□ 0.49
GAPVD1-214ENST00000469528 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
GAPVD1-214ENST00000469528 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
GAPVD1-214ENST00000469528 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
GAPVD1-214ENST00000469528 OVOS2A0A0G2JMS6 1433 aa18.08■□□□□ 0.49
GAPVD1-214ENST00000469528 OVOS2A0A0J9YW53 1432 aa18.08■□□□□ 0.49
GAPVD1-214ENST00000469528 OVOS2Q6IE36 1432 aa18.08■□□□□ 0.49
GAPVD1-214ENST00000469528 WDR17Q8IZU2 1322 aa18.08■□□□□ 0.49
GAPVD1-214ENST00000469528 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
GAPVD1-214ENST00000469528 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
GAPVD1-214ENST00000469528 BCL11BQ9C0K0 894 aaPredicted RBP18.08■□□□□ 0.48
GAPVD1-214ENST00000469528 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
GAPVD1-214ENST00000469528 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
GAPVD1-214ENST00000469528 TTC21BQ7Z4L5 1316 aa18.07■□□□□ 0.48
GAPVD1-214ENST00000469528 EXOC5O00471 708 aa18.07■□□□□ 0.48
GAPVD1-214ENST00000469528 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
GAPVD1-214ENST00000469528 SIN3AQ96ST3 1273 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms