RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 SSH2Q76I76 1423 aa17.39■□□□□ 0.37
RUNX1-213ENST00000469087 NLRP13Q86W25 1043 aa17.38■□□□□ 0.37
RUNX1-213ENST00000469087 NME9Q86XW9 330 aa17.38■□□□□ 0.37
RUNX1-213ENST00000469087 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
RUNX1-213ENST00000469087 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
RUNX1-213ENST00000469087 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
RUNX1-213ENST00000469087 FOXO3O43524 673 aa17.37■□□□□ 0.37
RUNX1-213ENST00000469087 KIF20BQ96Q89 1820 aa17.36■□□□□ 0.37
RUNX1-213ENST00000469087 NRKQ7Z2Y5 1582 aa17.36■□□□□ 0.37
RUNX1-213ENST00000469087 PSME1Q06323 249 aa17.35■□□□□ 0.37
RUNX1-213ENST00000469087 BRD4O60885 1362 aaPredicted RBP17.35■□□□□ 0.37
RUNX1-213ENST00000469087 SLAIN2Q9P270 581 aa17.35■□□□□ 0.37
RUNX1-213ENST00000469087 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.37
RUNX1-213ENST00000469087 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
RUNX1-213ENST00000469087 FBLN1P23142 703 aa17.32■□□□□ 0.36
RUNX1-213ENST00000469087 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
RUNX1-213ENST00000469087 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
RUNX1-213ENST00000469087 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
RUNX1-213ENST00000469087 COG3Q96JB2 828 aa17.31■□□□□ 0.36
RUNX1-213ENST00000469087 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
RUNX1-213ENST00000469087 KRT28Q7Z3Y7 464 aa17.3■□□□□ 0.36
RUNX1-213ENST00000469087 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
RUNX1-213ENST00000469087 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
RUNX1-213ENST00000469087 KIF1AQ12756 1690 aa17.3■□□□□ 0.36
RUNX1-213ENST00000469087 MTHFSP49914 203 aa17.3■□□□□ 0.36
RUNX1-213ENST00000469087 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
RUNX1-213ENST00000469087 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
RUNX1-213ENST00000469087 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
RUNX1-213ENST00000469087 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
RUNX1-213ENST00000469087 USP31Q70CQ4 1352 aa17.27■□□□□ 0.36
RUNX1-213ENST00000469087 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.36
RUNX1-213ENST00000469087 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.36
RUNX1-213ENST00000469087 NLRP6P59044 892 aa17.27■□□□□ 0.35
RUNX1-213ENST00000469087 PIK3C2AO00443 1686 aa17.27■□□□□ 0.35
RUNX1-213ENST00000469087 POLKQ9UBT6 870 aa17.25■□□□□ 0.35
RUNX1-213ENST00000469087 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
RUNX1-213ENST00000469087 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
RUNX1-213ENST00000469087 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
RUNX1-213ENST00000469087 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
RUNX1-213ENST00000469087 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
RUNX1-213ENST00000469087 EMILIN1Q9Y6C2 1016 aa17.23■□□□□ 0.35
RUNX1-213ENST00000469087 SOX12O15370 315 aa17.22■□□□□ 0.35
RUNX1-213ENST00000469087 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
RUNX1-213ENST00000469087 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
RUNX1-213ENST00000469087 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
RUNX1-213ENST00000469087 PXDNQ92626 1479 aa17.21■□□□□ 0.34
RUNX1-213ENST00000469087 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
RUNX1-213ENST00000469087 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
RUNX1-213ENST00000469087 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
RUNX1-213ENST00000469087 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
RUNX1-213ENST00000469087 USP54Q70EL1 1684 aa17.19■□□□□ 0.34
RUNX1-213ENST00000469087 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
RUNX1-213ENST00000469087 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
RUNX1-213ENST00000469087 ALS2Q96Q42 1657 aa17.17■□□□□ 0.34
RUNX1-213ENST00000469087 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.34
RUNX1-213ENST00000469087 INSRP06213 1382 aa17.16■□□□□ 0.34
RUNX1-213ENST00000469087 TOM1O60784 492 aa17.16■□□□□ 0.34
RUNX1-213ENST00000469087 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
RUNX1-213ENST00000469087 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
RUNX1-213ENST00000469087 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
RUNX1-213ENST00000469087 GCP02774 474 aa17.15■□□□□ 0.34
RUNX1-213ENST00000469087 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
RUNX1-213ENST00000469087 COL3A1P02461 1466 aaPredicted RBP17.15■□□□□ 0.34
RUNX1-213ENST00000469087 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
RUNX1-213ENST00000469087 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
RUNX1-213ENST00000469087 KCNH5Q8NCM2 988 aa17.15■□□□□ 0.34
RUNX1-213ENST00000469087 NHSL1Q5SYE7 1610 aa17.14■□□□□ 0.34
RUNX1-213ENST00000469087 USP19O94966 1318 aa17.14■□□□□ 0.33
RUNX1-213ENST00000469087 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
RUNX1-213ENST00000469087 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
RUNX1-213ENST00000469087 CERKQ8TCT0 537 aa17.14■□□□□ 0.33
RUNX1-213ENST00000469087 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
RUNX1-213ENST00000469087 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
RUNX1-213ENST00000469087 HSP90AB2PQ58FF8 381 aa17.12■□□□□ 0.33
RUNX1-213ENST00000469087 PEAK1Q9H792 1746 aa17.12■□□□□ 0.33
RUNX1-213ENST00000469087 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
RUNX1-213ENST00000469087 UBAP1LF5GYI3 381 aa17.12■□□□□ 0.33
RUNX1-213ENST00000469087 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
RUNX1-213ENST00000469087 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
RUNX1-213ENST00000469087 IL13P35225 146 aa17.11■□□□□ 0.33
RUNX1-213ENST00000469087 AMPHP49418 695 aa17.11■□□□□ 0.33
RUNX1-213ENST00000469087 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
RUNX1-213ENST00000469087 SLIT3O75094 1523 aa17.11■□□□□ 0.33
RUNX1-213ENST00000469087 NFAT5O94916 1531 aa17.11■□□□□ 0.33
RUNX1-213ENST00000469087 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
RUNX1-213ENST00000469087 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
RUNX1-213ENST00000469087 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
RUNX1-213ENST00000469087 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
RUNX1-213ENST00000469087 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
RUNX1-213ENST00000469087 HOXC9P31274 260 aa17.09■□□□□ 0.33
RUNX1-213ENST00000469087 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
RUNX1-213ENST00000469087 FLT4P35916 1363 aa17.08■□□□□ 0.33
RUNX1-213ENST00000469087 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.33
RUNX1-213ENST00000469087 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.33
RUNX1-213ENST00000469087 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.33
RUNX1-213ENST00000469087 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.33
RUNX1-213ENST00000469087 ZC3H6P61129 1189 aaKnown RBP17.07■□□□□ 0.32
RUNX1-213ENST00000469087 LTN1O94822 1766 aa17.07■□□□□ 0.32
RUNX1-213ENST00000469087 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
RUNX1-213ENST00000469087 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms