RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
ABCF1-204ENST00000468958 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
ABCF1-204ENST00000468958 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
ABCF1-204ENST00000468958 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
ABCF1-204ENST00000468958 TONSLQ96HA7 1378 aa17.98■□□□□ 0.47
ABCF1-204ENST00000468958 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
ABCF1-204ENST00000468958 PPIP5K1Q6PFW1 1433 aa17.97■□□□□ 0.47
ABCF1-204ENST00000468958 ACEP12821 1306 aa17.97■□□□□ 0.47
ABCF1-204ENST00000468958 BRWD3Q6RI45 1802 aa17.96■□□□□ 0.47
ABCF1-204ENST00000468958 COL14A1Q05707 1796 aaKnown RBP17.95■□□□□ 0.46
ABCF1-204ENST00000468958 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
ABCF1-204ENST00000468958 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
ABCF1-204ENST00000468958 CCDC61Q9Y6R9 512 aa17.95■□□□□ 0.46
ABCF1-204ENST00000468958 SRPK2P78362 688 aaKnown RBP17.94■□□□□ 0.46
ABCF1-204ENST00000468958 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
ABCF1-204ENST00000468958 TRPC5Q9UL62 973 aaPredicted RBP17.93■□□□□ 0.46
ABCF1-204ENST00000468958 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
ABCF1-204ENST00000468958 PAK3O75914 559 aaPredicted RBP17.92■□□□□ 0.46
ABCF1-204ENST00000468958 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
ABCF1-204ENST00000468958 FAM83GA6ND36 823 aa17.9■□□□□ 0.46
ABCF1-204ENST00000468958 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
ABCF1-204ENST00000468958 HAP1P54257 671 aaPredicted RBP17.89■□□□□ 0.45
ABCF1-204ENST00000468958 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.45
ABCF1-204ENST00000468958 UNC5CLQ8IV45 518 aa17.89■□□□□ 0.45
ABCF1-204ENST00000468958 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
ABCF1-204ENST00000468958 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
ABCF1-204ENST00000468958 EVC2Q86UK5 1308 aa17.88■□□□□ 0.45
ABCF1-204ENST00000468958 USP6P35125 1406 aa17.88■□□□□ 0.45
ABCF1-204ENST00000468958 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
ABCF1-204ENST00000468958 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
ABCF1-204ENST00000468958 GJD4Q96KN9 370 aaPredicted RBP17.87■□□□□ 0.45
ABCF1-204ENST00000468958 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
ABCF1-204ENST00000468958 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
ABCF1-204ENST00000468958 TIMELESSQ9UNS1 1208 aa17.85■□□□□ 0.45
ABCF1-204ENST00000468958 CD163L1Q9NR16 1453 aa17.84■□□□□ 0.45
ABCF1-204ENST00000468958 SLIT3O75094 1523 aa17.83■□□□□ 0.45
ABCF1-204ENST00000468958 KIAA0232Q92628 1395 aa17.83■□□□□ 0.45
ABCF1-204ENST00000468958 USP19O94966 1318 aa17.83■□□□□ 0.44
ABCF1-204ENST00000468958 RGPD5Q99666 1765 aa17.83■□□□□ 0.44
ABCF1-204ENST00000468958 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
ABCF1-204ENST00000468958 COL18A1P39060 1754 aa17.82■□□□□ 0.44
ABCF1-204ENST00000468958 VPS72Q15906 364 aa17.82■□□□□ 0.44
ABCF1-204ENST00000468958 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
ABCF1-204ENST00000468958 USP54Q70EL1 1684 aa17.81■□□□□ 0.44
ABCF1-204ENST00000468958 CHRNA2Q15822 529 aa17.81■□□□□ 0.44
ABCF1-204ENST00000468958 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
ABCF1-204ENST00000468958 EP400Q96L91 3159 aa17.81■□□□□ 0.44
ABCF1-204ENST00000468958 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
ABCF1-204ENST00000468958 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
ABCF1-204ENST00000468958 TESK2Q96S53 571 aa17.8■□□□□ 0.44
ABCF1-204ENST00000468958 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
ABCF1-204ENST00000468958 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
ABCF1-204ENST00000468958 BRD4O60885 1362 aaPredicted RBP17.79■□□□□ 0.44
ABCF1-204ENST00000468958 PRDM11Q9NQV5 511 aa17.78■□□□□ 0.44
ABCF1-204ENST00000468958 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
ABCF1-204ENST00000468958 TTC21BQ7Z4L5 1316 aa17.76■□□□□ 0.43
ABCF1-204ENST00000468958 CPDO75976 1380 aa17.76■□□□□ 0.43
ABCF1-204ENST00000468958 ONECUT3O60422 494 aaPredicted RBP17.75■□□□□ 0.43
ABCF1-204ENST00000468958 GCP02774 474 aa17.75■□□□□ 0.43
ABCF1-204ENST00000468958 CCDC9Q9Y3X0 531 aaKnown RBP17.75■□□□□ 0.43
ABCF1-204ENST00000468958 MYOM1P52179 1685 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 LTN1O94822 1766 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 NFAT5O94916 1531 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 NLRP13Q86W25 1043 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 SEPT12Q8IYM1 358 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
ABCF1-204ENST00000468958 USP47Q96K76 1375 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 WNK3Q9BYP7 1800 aa17.74■□□□□ 0.43
ABCF1-204ENST00000468958 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
ABCF1-204ENST00000468958 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
ABCF1-204ENST00000468958 NLRP6P59044 892 aa17.73■□□□□ 0.43
ABCF1-204ENST00000468958 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
ABCF1-204ENST00000468958 FAM98CQ17RN3 349 aaKnown RBP17.72■□□□□ 0.43
ABCF1-204ENST00000468958 ZNF692Q9BU19 519 aaPredicted RBP17.72■□□□□ 0.43
ABCF1-204ENST00000468958 COL5A2P05997 1499 aaPredicted RBP17.71■□□□□ 0.43
ABCF1-204ENST00000468958 A0A1W2PP64 1363 aa17.71■□□□□ 0.43
ABCF1-204ENST00000468958 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
ABCF1-204ENST00000468958 SPATA31A1Q5TZJ5 1347 aa17.7■□□□□ 0.42
ABCF1-204ENST00000468958 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
ABCF1-204ENST00000468958 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
ABCF1-204ENST00000468958 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
ABCF1-204ENST00000468958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.42
ABCF1-204ENST00000468958 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
ABCF1-204ENST00000468958 PARP4Q9UKK3 1724 aaKnown RBP17.68■□□□□ 0.42
ABCF1-204ENST00000468958 NME9Q86XW9 330 aa17.67■□□□□ 0.42
ABCF1-204ENST00000468958 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
ABCF1-204ENST00000468958 USP31Q70CQ4 1352 aa17.66■□□□□ 0.42
ABCF1-204ENST00000468958 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
ABCF1-204ENST00000468958 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
ABCF1-204ENST00000468958 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
ABCF1-204ENST00000468958 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
ABCF1-204ENST00000468958 KIF20BQ96Q89 1820 aa17.65■□□□□ 0.42
ABCF1-204ENST00000468958 RGPD1P0DJD0 1748 aa17.65■□□□□ 0.42
ABCF1-204ENST00000468958 SOX12O15370 315 aa17.65■□□□□ 0.42
ABCF1-204ENST00000468958 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
ABCF1-204ENST00000468958 KRT27Q7Z3Y8 459 aa17.65■□□□□ 0.42
ABCF1-204ENST00000468958 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
ABCF1-204ENST00000468958 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.42
ABCF1-204ENST00000468958 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms