RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
SSB-208ENST00000468600 XP32Q5T750 250 aa9.57□□□□□ -0.88
SSB-208ENST00000468600 MPNDQ8N594 471 aa9.57□□□□□ -0.88
SSB-208ENST00000468600 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
SSB-208ENST00000468600 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
SSB-208ENST00000468600 C6orf229H3BNL8 230 aa9.55□□□□□ -0.88
SSB-208ENST00000468600 MAN1A2O60476 641 aa9.55□□□□□ -0.88
SSB-208ENST00000468600 FDX1P10109 184 aa9.55□□□□□ -0.88
SSB-208ENST00000468600 MS4A1P11836 297 aa9.55□□□□□ -0.88
SSB-208ENST00000468600 GPAT2Q6NUI2 795 aa9.55□□□□□ -0.88
SSB-208ENST00000468600 GPR161Q8N6U8 529 aaKnown RBP9.55□□□□□ -0.88
SSB-208ENST00000468600 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
SSB-208ENST00000468600 PLEKHG3A1L390 1219 aa9.54□□□□□ -0.88
SSB-208ENST00000468600 BAP1Q92560 729 aa9.54□□□□□ -0.88
SSB-208ENST00000468600 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
SSB-208ENST00000468600 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
SSB-208ENST00000468600 VARSP26640 1264 aaKnown RBP9.52□□□□□ -0.89
SSB-208ENST00000468600 CNTNAP3BQ96NU0 1288 aa9.52□□□□□ -0.89
SSB-208ENST00000468600 CNTNAP3Q9BZ76 1288 aa9.52□□□□□ -0.89
SSB-208ENST00000468600 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
SSB-208ENST00000468600 PTPRNQ16849 979 aa9.51□□□□□ -0.89
SSB-208ENST00000468600 C6orf118Q5T5N4 469 aa9.51□□□□□ -0.89
SSB-208ENST00000468600 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
SSB-208ENST00000468600 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
SSB-208ENST00000468600 IGHA1P01876 353 aa9.49□□□□□ -0.89
SSB-208ENST00000468600 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
SSB-208ENST00000468600 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
SSB-208ENST00000468600 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
SSB-208ENST00000468600 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
SSB-208ENST00000468600 IRS1P35568 1242 aa9.48□□□□□ -0.89
SSB-208ENST00000468600 NR3C2P08235 984 aa9.46□□□□□ -0.9
SSB-208ENST00000468600 KCNH2Q12809 1159 aa9.46□□□□□ -0.9
SSB-208ENST00000468600 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
SSB-208ENST00000468600 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
SSB-208ENST00000468600 RNFT1Q5M7Z0 435 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 SPIRE2Q8WWL2 714 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
SSB-208ENST00000468600 KRTAP4-8Q9BYQ9 185 aa9.45□□□□□ -0.9
SSB-208ENST00000468600 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
SSB-208ENST00000468600 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
SSB-208ENST00000468600 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
SSB-208ENST00000468600 PRR7Q8TB68 274 aa9.44□□□□□ -0.9
SSB-208ENST00000468600 BMP2P12643 396 aa9.43□□□□□ -0.9
SSB-208ENST00000468600 MTMR2Q13614 643 aa9.43□□□□□ -0.9
SSB-208ENST00000468600 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
SSB-208ENST00000468600 FAM174AQ8TBP5 190 aa9.43□□□□□ -0.9
SSB-208ENST00000468600 MOXD2PA6NHM9 499 aa9.42□□□□□ -0.9
SSB-208ENST00000468600 FOXK2Q01167 660 aa9.42□□□□□ -0.9
SSB-208ENST00000468600 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
SSB-208ENST00000468600 NDUFV2P19404 249 aa9.41□□□□□ -0.9
SSB-208ENST00000468600 SLURP2P0DP57 97 aa9.4□□□□□ -0.9
SSB-208ENST00000468600 CTHP32929 405 aa9.4□□□□□ -0.9
SSB-208ENST00000468600 KANK3Q6NY19 840 aa9.4□□□□□ -0.9
SSB-208ENST00000468600 NANOS1Q8WY41 292 aaKnown RBP9.4□□□□□ -0.9
SSB-208ENST00000468600 GRM5P41594 1212 aa9.39□□□□□ -0.91
SSB-208ENST00000468600 FOXJ1Q92949 421 aa9.39□□□□□ -0.91
SSB-208ENST00000468600 PTSQ03393 145 aa9.38□□□□□ -0.91
SSB-208ENST00000468600 NR5A1Q13285 461 aa9.38□□□□□ -0.91
SSB-208ENST00000468600 ADAM23O75077 832 aa9.37□□□□□ -0.91
SSB-208ENST00000468600 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
SSB-208ENST00000468600 UPP2O95045 317 aa9.36□□□□□ -0.91
SSB-208ENST00000468600 DIXDC1Q155Q3 683 aa9.36□□□□□ -0.91
SSB-208ENST00000468600 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
SSB-208ENST00000468600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.35□□□□□ -0.911e-6■□□□□ 10.6
SSB-208ENST00000468600 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
SSB-208ENST00000468600 GJA5P36382 358 aa9.34□□□□□ -0.91
SSB-208ENST00000468600 AMHR2Q16671 573 aa9.34□□□□□ -0.91
SSB-208ENST00000468600 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
SSB-208ENST00000468600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSB-208ENST00000468600 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
SSB-208ENST00000468600 MARSP56192 900 aaKnown RBP9.33□□□□□ -0.92
SSB-208ENST00000468600 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
SSB-208ENST00000468600 TTLL8A6PVC2 850 aa9.32□□□□□ -0.92
SSB-208ENST00000468600 SPTLC1O15269 473 aa9.32□□□□□ -0.92
SSB-208ENST00000468600 ITGB2P05107 769 aa9.32□□□□□ -0.92
SSB-208ENST00000468600 AGERQ15109 404 aa9.32□□□□□ -0.92
SSB-208ENST00000468600 SCARF2Q96GP6 870 aaPredicted RBP9.32□□□□□ -0.92
SSB-208ENST00000468600 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.31□□□□□ -0.92
SSB-208ENST00000468600 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
SSB-208ENST00000468600 BARGINQ6ZT62 677 aa9.31□□□□□ -0.92
SSB-208ENST00000468600 TSEN34Q9BSV6 310 aaKnown RBP9.31□□□□□ -0.92
SSB-208ENST00000468600 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
SSB-208ENST00000468600 ZBTB3Q9H5J0 574 aa9.31□□□□□ -0.92
SSB-208ENST00000468600 MAP10Q9P2G4 905 aa9.31□□□□□ -0.92
SSB-208ENST00000468600 KRTAP9-2Q9BYQ4 174 aa9.3□□□□□ -0.92
SSB-208ENST00000468600 PLA2G4EQ3MJ16 856 aa9.29□□□□□ -0.92
SSB-208ENST00000468600 BPHLQ86WA6 291 aaPredicted RBP9.29□□□□□ -0.92
SSB-208ENST00000468600 SPOCK3Q9BQ16 436 aa9.29□□□□□ -0.92
SSB-208ENST00000468600 SLC35F4A4IF30 521 aa9.28□□□□□ -0.92
SSB-208ENST00000468600 FIGNL2A6NMB9 653 aa9.28□□□□□ -0.92
SSB-208ENST00000468600 CFAP99D6REC4 459 aa9.28□□□□□ -0.92
SSB-208ENST00000468600 MSTNO14793 375 aa9.28□□□□□ -0.92
SSB-208ENST00000468600 F12P00748 615 aaPredicted RBP9.28□□□□□ -0.92
SSB-208ENST00000468600 VWA5B2Q8N398 1253 aa9.28□□□□□ -0.92
SSB-208ENST00000468600 ITGA6P23229 1130 aa9.27□□□□□ -0.93
SSB-208ENST00000468600 HRCP23327 699 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms